RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 CHRNA5P30532 468 aa17.87■□□□□ 0.45
UPK1A-203ENST00000616789 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
UPK1A-203ENST00000616789 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
UPK1A-203ENST00000616789 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 GRIN3BO60391 1043 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 HOXB7P09629 217 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 GNAI1P63096 354 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
UPK1A-203ENST00000616789 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
UPK1A-203ENST00000616789 YY1P25490 414 aa17.85■□□□□ 0.45
UPK1A-203ENST00000616789 DUSP27Q5VZP5 1158 aa17.85■□□□□ 0.45
UPK1A-203ENST00000616789 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
UPK1A-203ENST00000616789 C8orf58Q8NAV2 365 aa17.85■□□□□ 0.45
UPK1A-203ENST00000616789 ARFGEF1Q9Y6D6 1849 aa17.85■□□□□ 0.45
UPK1A-203ENST00000616789 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
UPK1A-203ENST00000616789 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
UPK1A-203ENST00000616789 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
UPK1A-203ENST00000616789 DDX21Q9NR30 783 aaKnown RBP eCLIP17.84■□□□□ 0.45
UPK1A-203ENST00000616789 FAM9BQ8IZU0 186 aa17.83■□□□□ 0.45
UPK1A-203ENST00000616789 BRIP1Q9BX63 1249 aa17.83■□□□□ 0.45
UPK1A-203ENST00000616789 ATP10DQ9P241 1426 aa17.83■□□□□ 0.44
UPK1A-203ENST00000616789 IL16Q14005 1332 aa17.83■□□□□ 0.44
UPK1A-203ENST00000616789 COL11A2P13942 1736 aaPredicted RBP17.83■□□□□ 0.44
UPK1A-203ENST00000616789 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
UPK1A-203ENST00000616789 ZNF34Q8IZ26 560 aa17.82■□□□□ 0.44
UPK1A-203ENST00000616789 PIM2Q9P1W9 311 aa17.82■□□□□ 0.44
UPK1A-203ENST00000616789 CHPF2Q9P2E5 772 aa17.82■□□□□ 0.44
UPK1A-203ENST00000616789 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
UPK1A-203ENST00000616789 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
UPK1A-203ENST00000616789 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
UPK1A-203ENST00000616789 KLRG2A4D1S0 409 aaPredicted RBP17.81■□□□□ 0.44
UPK1A-203ENST00000616789 COPS6Q7L5N1 327 aa17.81■□□□□ 0.44
UPK1A-203ENST00000616789 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
UPK1A-203ENST00000616789 TSR2Q969E8 191 aaKnown RBP17.81■□□□□ 0.44
UPK1A-203ENST00000616789 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
UPK1A-203ENST00000616789 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
UPK1A-203ENST00000616789 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
UPK1A-203ENST00000616789 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
UPK1A-203ENST00000616789 WDR63Q8IWG1 891 aa17.79■□□□□ 0.44
UPK1A-203ENST00000616789 CNBD1Q8NA66 436 aa17.79■□□□□ 0.44
UPK1A-203ENST00000616789 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
UPK1A-203ENST00000616789 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
UPK1A-203ENST00000616789 ELL2O00472 640 aaPredicted RBP17.79■□□□□ 0.44
UPK1A-203ENST00000616789 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
UPK1A-203ENST00000616789 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
UPK1A-203ENST00000616789 C2CD5Q86YS7 1000 aa17.79■□□□□ 0.44
UPK1A-203ENST00000616789 DBF4Q9UBU7 674 aaPredicted RBP17.79■□□□□ 0.44
UPK1A-203ENST00000616789 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
UPK1A-203ENST00000616789 SRGNP10124 158 aa17.78■□□□□ 0.44
UPK1A-203ENST00000616789 SUSD4Q5VX71 490 aa17.78■□□□□ 0.44
UPK1A-203ENST00000616789 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
UPK1A-203ENST00000616789 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
UPK1A-203ENST00000616789 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
UPK1A-203ENST00000616789 ANKRD36CQ5JPF3 1778 aa17.77■□□□□ 0.44
UPK1A-203ENST00000616789 H0YIN7 160 aa17.77■□□□□ 0.43
UPK1A-203ENST00000616789 PDE6BP35913 854 aa17.77■□□□□ 0.43
UPK1A-203ENST00000616789 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.43
UPK1A-203ENST00000616789 ADCY9O60503 1353 aa17.76■□□□□ 0.43
UPK1A-203ENST00000616789 TNRC6CQ9HCJ0 1690 aaKnown RBP17.76■□□□□ 0.43
UPK1A-203ENST00000616789 NTSR2O95665 410 aa17.76■□□□□ 0.43
UPK1A-203ENST00000616789 GPTP24298 496 aa17.76■□□□□ 0.43
UPK1A-203ENST00000616789 AIMP1Q12904 312 aaKnown RBP17.76■□□□□ 0.43
UPK1A-203ENST00000616789 PDZRN3Q9UPQ7 1066 aa17.76■□□□□ 0.43
UPK1A-203ENST00000616789 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
UPK1A-203ENST00000616789 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
UPK1A-203ENST00000616789 SLX4Q8IY92 1834 aa17.75■□□□□ 0.43
UPK1A-203ENST00000616789 SBF1O95248 1867 aa17.75■□□□□ 0.43
UPK1A-203ENST00000616789 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
UPK1A-203ENST00000616789 HYPKQ9NX55 129 aa17.75■□□□□ 0.43
UPK1A-203ENST00000616789 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
UPK1A-203ENST00000616789 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 ST5P78524 1137 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 ERFEQ4G0M1 354 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 NUTM1Q86Y26 1132 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 TTLL6Q8N841 843 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 PLBD2Q8NHP8 589 aa17.74■□□□□ 0.43
UPK1A-203ENST00000616789 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
UPK1A-203ENST00000616789 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
UPK1A-203ENST00000616789 PRELPP51888 382 aa17.73■□□□□ 0.43
UPK1A-203ENST00000616789 CRY2Q49AN0 593 aa17.73■□□□□ 0.43
UPK1A-203ENST00000616789 NLRP10Q86W26 655 aa17.73■□□□□ 0.43
UPK1A-203ENST00000616789 VAMP4O75379 141 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 PARP10Q53GL7 1025 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
UPK1A-203ENST00000616789 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
UPK1A-203ENST00000616789 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
UPK1A-203ENST00000616789 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.43
UPK1A-203ENST00000616789 MASTLQ96GX5 879 aa17.71■□□□□ 0.43
UPK1A-203ENST00000616789 CACNA1SQ13698 1873 aa17.71■□□□□ 0.42
UPK1A-203ENST00000616789 FER1L6Q2WGJ9 1857 aa17.71■□□□□ 0.42
UPK1A-203ENST00000616789 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms