RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 NPHP1O15259 732 aa23.29■■□□□ 1.32
TNFAIP3-207ENST00000614035 TOMM70O94826 608 aa23.29■■□□□ 1.32
TNFAIP3-207ENST00000614035 LMNB1P20700 586 aa23.29■■□□□ 1.32
TNFAIP3-207ENST00000614035 KDM2BQ8NHM5 1336 aa23.29■■□□□ 1.32
TNFAIP3-207ENST00000614035 ZNF622Q969S3 477 aaKnown RBP eCLIP23.28■■□□□ 1.32
TNFAIP3-207ENST00000614035 NFKBIEO00221 500 aa23.27■■□□□ 1.32
TNFAIP3-207ENST00000614035 PRELPP51888 382 aa23.27■■□□□ 1.32
TNFAIP3-207ENST00000614035 NBPF5PQ86XG9 351 aaPredicted RBP23.27■■□□□ 1.32
TNFAIP3-207ENST00000614035 SRGNP10124 158 aa23.26■■□□□ 1.31
TNFAIP3-207ENST00000614035 STYK1Q6J9G0 422 aa23.26■■□□□ 1.31
TNFAIP3-207ENST00000614035 RIPK4P57078 832 aa23.25■■□□□ 1.31
TNFAIP3-207ENST00000614035 NIP7Q9Y221 180 aaKnown RBP eCLIP23.25■■□□□ 1.31
TNFAIP3-207ENST00000614035 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
TNFAIP3-207ENST00000614035 ARFGEF2Q9Y6D5 1785 aa23.25■■□□□ 1.31
TNFAIP3-207ENST00000614035 CNKSR1Q969H4 720 aa23.25■■□□□ 1.31
TNFAIP3-207ENST00000614035 FER1L6Q2WGJ9 1857 aa23.24■■□□□ 1.31
TNFAIP3-207ENST00000614035 C21orf2O43822 256 aa23.24■■□□□ 1.31
TNFAIP3-207ENST00000614035 TMPOP42166 694 aaKnown RBP23.24■■□□□ 1.31
TNFAIP3-207ENST00000614035 HLFQ16534 295 aa23.24■■□□□ 1.31
TNFAIP3-207ENST00000614035 TPTE2Q6XPS3 522 aa23.24■■□□□ 1.31
TNFAIP3-207ENST00000614035 MASTLQ96GX5 879 aa23.24■■□□□ 1.31
TNFAIP3-207ENST00000614035 CCDC88AQ3V6T2 1871 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 SLX4Q8IY92 1834 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 KLRG2A4D1S0 409 aaPredicted RBP23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 ERVV-1B6SEH8 477 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 LMOD3Q0VAK6 560 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 TIAM2Q8IVF5 1701 aa23.23■■□□□ 1.31
TNFAIP3-207ENST00000614035 ERBB4Q15303 1308 aa23.22■■□□□ 1.31
TNFAIP3-207ENST00000614035 PRPF40BQ6NWY9 871 aaKnown RBP23.22■■□□□ 1.31
TNFAIP3-207ENST00000614035 MAP3K15Q6ZN16 1313 aa23.21■■□□□ 1.31
TNFAIP3-207ENST00000614035 LTBP3Q9NS15 1303 aa23.21■■□□□ 1.31
TNFAIP3-207ENST00000614035 RBM46Q8TBY0 533 aaKnown RBP23.21■■□□□ 1.31
TNFAIP3-207ENST00000614035 RRP7AQ9Y3A4 280 aaKnown RBP23.21■■□□□ 1.31
TNFAIP3-207ENST00000614035 CACNA1SQ13698 1873 aa23.21■■□□□ 1.31
TNFAIP3-207ENST00000614035 NUP98P52948 1817 aa23.2■■□□□ 1.31
TNFAIP3-207ENST00000614035 GLTPD2A6NH11 291 aa23.19■■□□□ 1.3
TNFAIP3-207ENST00000614035 TTLL7Q6ZT98 887 aa23.19■■□□□ 1.3
TNFAIP3-207ENST00000614035 C16orf71Q8IYS4 520 aaPredicted RBP23.19■■□□□ 1.3
TNFAIP3-207ENST00000614035 NGEFQ8N5V2 710 aa23.19■■□□□ 1.3
TNFAIP3-207ENST00000614035 RRAGCQ9HB90 399 aa23.19■■□□□ 1.3
TNFAIP3-207ENST00000614035 ZNF219Q9P2Y4 722 aaPredicted RBP23.19■■□□□ 1.3
TNFAIP3-207ENST00000614035 DICER1Q9UPY3 1922 aaKnown RBP23.18■■□□□ 1.3
TNFAIP3-207ENST00000614035 MYL6BP14649 208 aa23.18■■□□□ 1.3
TNFAIP3-207ENST00000614035 NPR1P16066 1061 aa23.18■■□□□ 1.3
TNFAIP3-207ENST00000614035 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
TNFAIP3-207ENST00000614035 KIF6Q6ZMV9 814 aa23.18■■□□□ 1.3
TNFAIP3-207ENST00000614035 C7orf43Q8WVR3 580 aa23.17■■□□□ 1.3
TNFAIP3-207ENST00000614035 TAOK3Q9H2K8 898 aa23.17■■□□□ 1.3
TNFAIP3-207ENST00000614035 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 APLP1P51693 650 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 CCDC146Q8IYE0 955 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 IBTKQ9P2D0 1353 aaPredicted RBP23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 FSTL1Q12841 308 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 LRP10Q7Z4F1 713 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 NYXQ9GZU5 481 aa23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 PRKRIP1Q9H875 184 aaPredicted RBP23.16■■□□□ 1.3
TNFAIP3-207ENST00000614035 GTF2E1P29083 439 aaPredicted RBP23.14■■□□□ 1.29
TNFAIP3-207ENST00000614035 PDIA6Q15084 440 aa23.14■■□□□ 1.29
TNFAIP3-207ENST00000614035 ERFEQ4G0M1 354 aa23.14■■□□□ 1.29
TNFAIP3-207ENST00000614035 ZBTB3Q9H5J0 574 aa23.14■■□□□ 1.29
TNFAIP3-207ENST00000614035 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
TNFAIP3-207ENST00000614035 RIC1Q4ADV7 1423 aa23.14■■□□□ 1.29
TNFAIP3-207ENST00000614035 ABCC12Q96J65 1359 aa23.13■■□□□ 1.29
TNFAIP3-207ENST00000614035 VEGFAP15692 232 aaPredicted RBP23.13■■□□□ 1.29
TNFAIP3-207ENST00000614035 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
TNFAIP3-207ENST00000614035 CRY2Q49AN0 593 aa23.13■■□□□ 1.29
TNFAIP3-207ENST00000614035 TRIM35Q9UPQ4 493 aa23.13■■□□□ 1.29
TNFAIP3-207ENST00000614035 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
TNFAIP3-207ENST00000614035 CHL1O00533 1208 aa23.12■■□□□ 1.29
TNFAIP3-207ENST00000614035 CCDC93Q567U6 631 aa23.12■■□□□ 1.29
TNFAIP3-207ENST00000614035 GIGYF2Q6Y7W6 1299 aaKnown RBP23.12■■□□□ 1.29
TNFAIP3-207ENST00000614035 ZNF34Q8IZ26 560 aa23.12■■□□□ 1.29
TNFAIP3-207ENST00000614035 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
TNFAIP3-207ENST00000614035 EIF2S2P20042 333 aaKnown RBP23.11■■□□□ 1.29
TNFAIP3-207ENST00000614035 ALDH1B1P30837 517 aa23.11■■□□□ 1.29
TNFAIP3-207ENST00000614035 DPY19L2Q6NUT2 758 aa23.11■■□□□ 1.29
TNFAIP3-207ENST00000614035 NUTM1Q86Y26 1132 aa23.11■■□□□ 1.29
TNFAIP3-207ENST00000614035 GPTP24298 496 aa23.1■■□□□ 1.29
TNFAIP3-207ENST00000614035 PROSER3Q2NL68 480 aa23.09■■□□□ 1.29
TNFAIP3-207ENST00000614035 SUSD4Q5VX71 490 aa23.09■■□□□ 1.29
TNFAIP3-207ENST00000614035 SMC1BQ8NDV3 1235 aa23.09■■□□□ 1.29
TNFAIP3-207ENST00000614035 NTSR2O95665 410 aa23.08■■□□□ 1.28
TNFAIP3-207ENST00000614035 FKBP4Q02790 459 aaKnown RBP eCLIP23.08■■□□□ 1.28
TNFAIP3-207ENST00000614035 POTECB2RU33 542 aa23.07■■□□□ 1.28
TNFAIP3-207ENST00000614035 PARP10Q53GL7 1025 aa23.07■■□□□ 1.28
TNFAIP3-207ENST00000614035 RTKN2Q8IZC4 609 aa23.07■■□□□ 1.28
TNFAIP3-207ENST00000614035 DNAJC5GQ8N7S2 189 aa23.07■■□□□ 1.28
TNFAIP3-207ENST00000614035 ANXA1P04083 346 aa23.06■■□□□ 1.28
TNFAIP3-207ENST00000614035 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
TNFAIP3-207ENST00000614035 OLFM4Q6UX06 510 aa23.06■■□□□ 1.28
TNFAIP3-207ENST00000614035 SNED1Q8TER0 1413 aa23.06■■□□□ 1.28
TNFAIP3-207ENST00000614035 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
TNFAIP3-207ENST00000614035 PPP1R42Q7Z4L9 355 aa23.05■■□□□ 1.28
TNFAIP3-207ENST00000614035 DDX21Q9NR30 783 aaKnown RBP eCLIP23.05■■□□□ 1.28
TNFAIP3-207ENST00000614035 ANKRD36CQ5JPF3 1778 aa23.04■■□□□ 1.28
TNFAIP3-207ENST00000614035 HOXB7P09629 217 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms