RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 SENP3-EIF4A1A0A087X0R7 540 aa22.56■■□□□ 1.2
CCL3-204ENST00000613922 KIF3CO14782 793 aa22.56■■□□□ 1.2
CCL3-204ENST00000613922 TSPYL4Q9UJ04 414 aa22.56■■□□□ 1.2
CCL3-204ENST00000613922 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
CCL3-204ENST00000613922 ST5P78524 1137 aa22.55■■□□□ 1.2
CCL3-204ENST00000613922 SLX4Q8IY92 1834 aa22.54■■□□□ 1.2
CCL3-204ENST00000613922 WDR43Q15061 677 aaKnown RBP eCLIP22.54■■□□□ 1.2
CCL3-204ENST00000613922 CCDC146Q8IYE0 955 aa22.54■■□□□ 1.2
CCL3-204ENST00000613922 RUNDC1Q96C34 613 aa22.54■■□□□ 1.2
CCL3-204ENST00000613922 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
CCL3-204ENST00000613922 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
CCL3-204ENST00000613922 HLFQ16534 295 aa22.53■■□□□ 1.2
CCL3-204ENST00000613922 NBPF5PQ86XG9 351 aaPredicted RBP22.53■■□□□ 1.2
CCL3-204ENST00000613922 ZNF622Q969S3 477 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCL3-204ENST00000613922 NIP7Q9Y221 180 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCL3-204ENST00000613922 DICER1Q9UPY3 1922 aaKnown RBP22.53■■□□□ 1.2
CCL3-204ENST00000613922 ERVV-1B6SEH8 477 aa22.52■■□□□ 1.2
CCL3-204ENST00000613922 NPHP1O15259 732 aa22.52■■□□□ 1.2
CCL3-204ENST00000613922 RASSF7Q02833 373 aa22.52■■□□□ 1.2
CCL3-204ENST00000613922 ADAMTS8Q9UP79 889 aa22.52■■□□□ 1.2
CCL3-204ENST00000613922 RRP7AQ9Y3A4 280 aaKnown RBP22.52■■□□□ 1.2
CCL3-204ENST00000613922 SRGNP10124 158 aa22.51■■□□□ 1.19
CCL3-204ENST00000613922 STYK1Q6J9G0 422 aa22.51■■□□□ 1.19
CCL3-204ENST00000613922 MAP3K15Q6ZN16 1313 aa22.51■■□□□ 1.19
CCL3-204ENST00000613922 PRELPP51888 382 aa22.5■■□□□ 1.19
CCL3-204ENST00000613922 TPTE2Q6XPS3 522 aa22.5■■□□□ 1.19
CCL3-204ENST00000613922 NGEFQ8N5V2 710 aa22.5■■□□□ 1.19
CCL3-204ENST00000613922 TRIM35Q9UPQ4 493 aa22.5■■□□□ 1.19
CCL3-204ENST00000613922 TIAM2Q8IVF5 1701 aa22.5■■□□□ 1.19
CCL3-204ENST00000613922 ZC3H4Q9UPT8 1303 aaKnown RBP22.5■■□□□ 1.19
CCL3-204ENST00000613922 KLRG2A4D1S0 409 aaPredicted RBP22.49■■□□□ 1.19
CCL3-204ENST00000613922 NFKBIEO00221 500 aa22.49■■□□□ 1.19
CCL3-204ENST00000613922 TTLL7Q6ZT98 887 aa22.49■■□□□ 1.19
CCL3-204ENST00000613922 CNKSR1Q969H4 720 aa22.49■■□□□ 1.19
CCL3-204ENST00000613922 MASTLQ96GX5 879 aa22.49■■□□□ 1.19
CCL3-204ENST00000613922 CEP350Q5VT06 3117 aa22.49■■□□□ 1.19
CCL3-204ENST00000613922 TNRC6CQ9HCJ0 1690 aaKnown RBP22.49■■□□□ 1.19
CCL3-204ENST00000613922 MYL6BP14649 208 aa22.48■■□□□ 1.19
CCL3-204ENST00000613922 LMNB1P20700 586 aa22.48■■□□□ 1.19
CCL3-204ENST00000613922 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
CCL3-204ENST00000613922 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
CCL3-204ENST00000613922 NMRK2Q9NPI5 230 aa22.48■■□□□ 1.19
CCL3-204ENST00000613922 CHL1O00533 1208 aa22.47■■□□□ 1.19
CCL3-204ENST00000613922 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
CCL3-204ENST00000613922 PDIA6Q15084 440 aa22.47■■□□□ 1.19
CCL3-204ENST00000613922 KIF6Q6ZMV9 814 aa22.47■■□□□ 1.19
CCL3-204ENST00000613922 C21orf2O43822 256 aa22.46■■□□□ 1.19
CCL3-204ENST00000613922 PRPF40BQ6NWY9 871 aaKnown RBP22.45■■□□□ 1.18
CCL3-204ENST00000613922 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
CCL3-204ENST00000613922 FAM177BA6PVY3 158 aa22.44■■□□□ 1.18
CCL3-204ENST00000613922 NPR1P16066 1061 aa22.44■■□□□ 1.18
CCL3-204ENST00000613922 EIF2S2P20042 333 aaKnown RBP22.44■■□□□ 1.18
CCL3-204ENST00000613922 LTBP3Q9NS15 1303 aa22.44■■□□□ 1.18
CCL3-204ENST00000613922 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
CCL3-204ENST00000613922 TOMM70O94826 608 aa22.43■■□□□ 1.18
CCL3-204ENST00000613922 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
CCL3-204ENST00000613922 NYXQ9GZU5 481 aa22.43■■□□□ 1.18
CCL3-204ENST00000613922 ZBTB3Q9H5J0 574 aa22.43■■□□□ 1.18
CCL3-204ENST00000613922 ZNF219Q9P2Y4 722 aaPredicted RBP22.43■■□□□ 1.18
CCL3-204ENST00000613922 ANKRD36CQ5JPF3 1778 aa22.43■■□□□ 1.18
CCL3-204ENST00000613922 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 UBN2Q6ZU65 1347 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 HSPA6P17066 643 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 SOGA3Q5TF21 947 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 ZNF34Q8IZ26 560 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 C7orf43Q8WVR3 580 aa22.42■■□□□ 1.18
CCL3-204ENST00000613922 ABCC12Q96J65 1359 aa22.41■■□□□ 1.18
CCL3-204ENST00000613922 GTF2E1P29083 439 aaPredicted RBP22.4■■□□□ 1.18
CCL3-204ENST00000613922 GLTPD2A6NH11 291 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 ANXA1P04083 346 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 GPTP24298 496 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 KRT24Q2M2I5 525 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 CRY2Q49AN0 593 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 SUSD4Q5VX71 490 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 NUTM1Q86Y26 1132 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 RBM46Q8TBY0 533 aaKnown RBP22.39■■□□□ 1.17
CCL3-204ENST00000613922 CFAP44Q96MT7 982 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 TAOK3Q9H2K8 898 aa22.39■■□□□ 1.17
CCL3-204ENST00000613922 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.17
CCL3-204ENST00000613922 HOXB7P09629 217 aa22.38■■□□□ 1.17
CCL3-204ENST00000613922 ERFEQ4G0M1 354 aa22.38■■□□□ 1.17
CCL3-204ENST00000613922 RRAGCQ9HB90 399 aa22.38■■□□□ 1.17
CCL3-204ENST00000613922 APAF1O14727 1248 aa22.37■■□□□ 1.17
CCL3-204ENST00000613922 NTSR2O95665 410 aa22.37■■□□□ 1.17
CCL3-204ENST00000613922 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
CCL3-204ENST00000613922 WDR90Q96KV7 1748 aa22.37■■□□□ 1.17
CCL3-204ENST00000613922 ZNF853P0CG23 659 aa22.36■■□□□ 1.17
CCL3-204ENST00000613922 ALDH1B1P30837 517 aa22.36■■□□□ 1.17
CCL3-204ENST00000613922 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
CCL3-204ENST00000613922 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
CCL3-204ENST00000613922 NECTIN2Q92692 538 aa22.36■■□□□ 1.17
CCL3-204ENST00000613922 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
CCL3-204ENST00000613922 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
CCL3-204ENST00000613922 C16orf71Q8IYS4 520 aaPredicted RBP22.35■■□□□ 1.17
CCL3-204ENST00000613922 XAGE3Q8WTP9 111 aa22.35■■□□□ 1.17
CCL3-204ENST00000613922 MBIPQ9NS73 344 aa22.34■■□□□ 1.17
CCL3-204ENST00000613922 LAMB2P55268 1798 aa22.33■■□□□ 1.17
CCL3-204ENST00000613922 HOXA10P31260 410 aaPredicted RBP22.33■■□□□ 1.17
CCL3-204ENST00000613922 CCDC184Q52MB2 194 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms