RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 CCDC87Q9NVE4 849 aa24.69■■□□□ 1.54
SRRM3-205ENST00000612155 BAG6P46379 1132 aa24.69■■□□□ 1.54
SRRM3-205ENST00000612155 HDAC1Q13547 482 aaPredicted RBP24.69■■□□□ 1.54
SRRM3-205ENST00000612155 LRP10Q7Z4F1 713 aa24.69■■□□□ 1.54
SRRM3-205ENST00000612155 SLC27A3Q5K4L6 730 aa24.67■■□□□ 1.54
SRRM3-205ENST00000612155 XAGE3Q8WTP9 111 aa24.67■■□□□ 1.54
SRRM3-205ENST00000612155 FLIIQ13045 1269 aa24.67■■□□□ 1.54
SRRM3-205ENST00000612155 COPS6Q7L5N1 327 aa24.67■■□□□ 1.54
SRRM3-205ENST00000612155 ABCC4O15439 1325 aa24.67■■□□□ 1.54
SRRM3-205ENST00000612155 GNPATO15228 680 aa24.66■■□□□ 1.54
SRRM3-205ENST00000612155 TTLL7Q6ZT98 887 aa24.66■■□□□ 1.54
SRRM3-205ENST00000612155 ZNF831Q5JPB2 1677 aa24.66■■□□□ 1.54
SRRM3-205ENST00000612155 F6X3S4 739 aa24.66■■□□□ 1.54
SRRM3-205ENST00000612155 ZBTB7BO15156 539 aaPredicted RBP24.66■■□□□ 1.54
SRRM3-205ENST00000612155 PHF14O94880 888 aa24.65■■□□□ 1.54
SRRM3-205ENST00000612155 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
SRRM3-205ENST00000612155 C4BP0C0L5 1744 aa24.65■■□□□ 1.54
SRRM3-205ENST00000612155 ZNF827Q17R98 1081 aa24.64■■□□□ 1.54
SRRM3-205ENST00000612155 HYPKQ9NX55 129 aa24.64■■□□□ 1.54
SRRM3-205ENST00000612155 CICQ96RK0 1608 aaPredicted RBP24.64■■□□□ 1.54
SRRM3-205ENST00000612155 AK7Q96M32 723 aa24.63■■□□□ 1.53
SRRM3-205ENST00000612155 BCL11AQ9H165 835 aa24.63■■□□□ 1.53
SRRM3-205ENST00000612155 TBC1D2BQ9UPU7 963 aa24.63■■□□□ 1.53
SRRM3-205ENST00000612155 CNTNAP4Q9C0A0 1308 aa24.62■■□□□ 1.53
SRRM3-205ENST00000612155 ANO8Q9HCE9 1232 aaPredicted RBP24.61■■□□□ 1.53
SRRM3-205ENST00000612155 SMC5Q8IY18 1101 aa24.61■■□□□ 1.53
SRRM3-205ENST00000612155 ZBTB3Q9H5J0 574 aa24.61■■□□□ 1.53
SRRM3-205ENST00000612155 ERBB4Q15303 1308 aa24.61■■□□□ 1.53
SRRM3-205ENST00000612155 EIF5P55010 431 aaKnown RBP24.6■■□□□ 1.53
SRRM3-205ENST00000612155 CCDC125Q86Z20 511 aa24.6■■□□□ 1.53
SRRM3-205ENST00000612155 CHMP4AQ9BY43 222 aa24.6■■□□□ 1.53
SRRM3-205ENST00000612155 ZBTB47Q9UFB7 747 aaPredicted RBP24.6■■□□□ 1.53
SRRM3-205ENST00000612155 PI4KAP2A4QPH2 592 aa24.6■■□□□ 1.53
SRRM3-205ENST00000612155 IL6STP40189 918 aaPredicted RBP24.6■■□□□ 1.53
SRRM3-205ENST00000612155 PI4KAP1Q8N8J0 262 aa24.6■■□□□ 1.53
SRRM3-205ENST00000612155 SEC24BO95487 1268 aa24.59■■□□□ 1.53
SRRM3-205ENST00000612155 C1orf115Q9H7X2 142 aa24.59■■□□□ 1.53
SRRM3-205ENST00000612155 CACNA1FO60840 1977 aa24.59■■□□□ 1.53
SRRM3-205ENST00000612155 RGPD3A6NKT7 1758 aaPredicted RBP24.59■■□□□ 1.53
SRRM3-205ENST00000612155 RGPD4Q7Z3J3 1758 aa24.59■■□□□ 1.53
SRRM3-205ENST00000612155 RC3H1Q5TC82 1133 aaKnown RBP24.59■■□□□ 1.53
SRRM3-205ENST00000612155 SLC4A10Q6U841 1118 aa24.59■■□□□ 1.53
SRRM3-205ENST00000612155 RREB1Q92766 1687 aa24.58■■□□□ 1.53
SRRM3-205ENST00000612155 RTCBQ9Y3I0 505 aaKnown RBP24.58■■□□□ 1.53
SRRM3-205ENST00000612155 ADCY9O60503 1353 aa24.58■■□□□ 1.52
SRRM3-205ENST00000612155 COL15A1P39059 1388 aa24.58■■□□□ 1.52
SRRM3-205ENST00000612155 RPS6KA4O75676 772 aa24.57■■□□□ 1.52
SRRM3-205ENST00000612155 API5Q9BZZ5 524 aaKnown RBP24.57■■□□□ 1.52
SRRM3-205ENST00000612155 TFCP2L1Q9NZI6 479 aa24.57■■□□□ 1.52
SRRM3-205ENST00000612155 DZIP3Q86Y13 1208 aaKnown RBP24.57■■□□□ 1.52
SRRM3-205ENST00000612155 MAP3K2Q9Y2U5 619 aa24.57■■□□□ 1.52
SRRM3-205ENST00000612155 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
SRRM3-205ENST00000612155 ANKRD13DQ6ZTN6 518 aa24.56■■□□□ 1.52
SRRM3-205ENST00000612155 RIC3Q7Z5B4 369 aa24.56■■□□□ 1.52
SRRM3-205ENST00000612155 SIRT2Q8IXJ6 389 aa24.56■■□□□ 1.52
SRRM3-205ENST00000612155 SRP68Q9UHB9 627 aaKnown RBP24.56■■□□□ 1.52
SRRM3-205ENST00000612155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.55■■□□□ 1.52
SRRM3-205ENST00000612155 HLFQ16534 295 aa24.55■■□□□ 1.52
SRRM3-205ENST00000612155 ARHGEF1Q92888 912 aaKnown RBP24.55■■□□□ 1.52
SRRM3-205ENST00000612155 PTPRCP08575 1304 aa24.55■■□□□ 1.52
SRRM3-205ENST00000612155 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
SRRM3-205ENST00000612155 UBR3Q6ZT12 1888 aa24.54■■□□□ 1.52
SRRM3-205ENST00000612155 KSR2Q6VAB6 950 aa24.53■■□□□ 1.52
SRRM3-205ENST00000612155 KIF6Q6ZMV9 814 aa24.52■■□□□ 1.52
SRRM3-205ENST00000612155 TUBGCP6Q96RT7 1819 aa24.52■■□□□ 1.52
SRRM3-205ENST00000612155 ATP5J2-PTCD1G3V325 749 aa24.52■■□□□ 1.52
SRRM3-205ENST00000612155 TRAPPC3LQ5T215 181 aa24.52■■□□□ 1.52
SRRM3-205ENST00000612155 INTS3Q68E01 1043 aaKnown RBP24.52■■□□□ 1.52
SRRM3-205ENST00000612155 DNAAF4Q8WXU2 420 aa24.52■■□□□ 1.52
SRRM3-205ENST00000612155 DDX58O95786 925 aaKnown RBP24.51■■□□□ 1.51
SRRM3-205ENST00000612155 PLBD2Q8NHP8 589 aa24.51■■□□□ 1.51
SRRM3-205ENST00000612155 MYD88Q99836 296 aa24.51■■□□□ 1.51
SRRM3-205ENST00000612155 MAP3K15Q6ZN16 1313 aa24.5■■□□□ 1.51
SRRM3-205ENST00000612155 SLC15A2Q16348 729 aa24.5■■□□□ 1.51
SRRM3-205ENST00000612155 PDGFDQ9GZP0 370 aaPredicted RBP24.5■■□□□ 1.51
SRRM3-205ENST00000612155 CAMTA2O94983 1202 aa24.5■■□□□ 1.51
SRRM3-205ENST00000612155 NUCB1Q02818 461 aa24.5■■□□□ 1.51
SRRM3-205ENST00000612155 CWF19L2Q2TBE0 894 aaKnown RBP24.5■■□□□ 1.51
SRRM3-205ENST00000612155 USPL1Q5W0Q7 1092 aa24.5■■□□□ 1.51
SRRM3-205ENST00000612155 ARFGEF2Q9Y6D5 1785 aa24.49■■□□□ 1.51
SRRM3-205ENST00000612155 RFC4P35249 363 aa24.49■■□□□ 1.51
SRRM3-205ENST00000612155 COL23A1Q86Y22 540 aaPredicted RBP24.49■■□□□ 1.51
SRRM3-205ENST00000612155 STK32BQ9NY57 414 aa24.49■■□□□ 1.51
SRRM3-205ENST00000612155 C4AP0C0L4 1744 aa24.48■■□□□ 1.51
SRRM3-205ENST00000612155 GPTP24298 496 aa24.48■■□□□ 1.51
SRRM3-205ENST00000612155 PNPLA7Q6ZV29 1317 aa24.48■■□□□ 1.51
SRRM3-205ENST00000612155 BCL2L12Q9HB09 334 aa24.47■■□□□ 1.51
SRRM3-205ENST00000612155 SSFA2P28290 1259 aa24.46■■□□□ 1.51
SRRM3-205ENST00000612155 CHMP4BQ9H444 224 aaKnown RBP24.46■■□□□ 1.51
SRRM3-205ENST00000612155 ZPR1O75312 459 aa24.46■■□□□ 1.51
SRRM3-205ENST00000612155 IGKV5-2P06315 115 aa24.46■■□□□ 1.51
SRRM3-205ENST00000612155 BEND3Q5T5X7 828 aa24.46■■□□□ 1.51
SRRM3-205ENST00000612155 BICDL1Q6ZP65 573 aa24.46■■□□□ 1.51
SRRM3-205ENST00000612155 METTL22Q9BUU2 404 aaPredicted RBP24.46■■□□□ 1.51
SRRM3-205ENST00000612155 JARID2Q92833 1246 aaPredicted RBP24.45■■□□□ 1.5
SRRM3-205ENST00000612155 LNPKQ9C0E8 428 aa24.45■■□□□ 1.5
SRRM3-205ENST00000612155 NARFQ9UHQ1 456 aa24.45■■□□□ 1.5
SRRM3-205ENST00000612155 GIGYF2Q6Y7W6 1299 aaKnown RBP24.44■■□□□ 1.5
SRRM3-205ENST00000612155 NUP98P52948 1817 aa24.44■■□□□ 1.5
SRRM3-205ENST00000612155 A0A087WZG4 1122 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms