RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 ANKRD13DQ6ZTN6 518 aa15.15■□□□□ 0.02
VPS45-212ENST00000611412 ABCC4O15439 1325 aa15.15■□□□□ 0.02
VPS45-212ENST00000611412 ZNF827Q17R98 1081 aa15.15■□□□□ 0.02
VPS45-212ENST00000611412 KSR2Q6VAB6 950 aa15.15■□□□□ 0.02
VPS45-212ENST00000611412 DZIP3Q86Y13 1208 aaKnown RBP15.15■□□□□ 0.02
VPS45-212ENST00000611412 ITPRIPQ8IWB1 547 aa15.15■□□□□ 0.02
VPS45-212ENST00000611412 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
VPS45-212ENST00000611412 COL15A1P39059 1388 aa15.14■□□□□ 0.01
VPS45-212ENST00000611412 RPS6KA4O75676 772 aa15.14■□□□□ 0.01
VPS45-212ENST00000611412 PDE3AQ14432 1141 aa15.14■□□□□ 0.01
VPS45-212ENST00000611412 KIF6Q6ZMV9 814 aa15.14■□□□□ 0.01
VPS45-212ENST00000611412 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
VPS45-212ENST00000611412 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.01
VPS45-212ENST00000611412 RTCBQ9Y3I0 505 aaKnown RBP15.14■□□□□ 0.01
VPS45-212ENST00000611412 RGPD3A6NKT7 1758 aaPredicted RBP15.13■□□□□ 0.01
VPS45-212ENST00000611412 RGPD4Q7Z3J3 1758 aa15.13■□□□□ 0.01
VPS45-212ENST00000611412 HLFQ16534 295 aa15.13■□□□□ 0.01
VPS45-212ENST00000611412 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
VPS45-212ENST00000611412 MYD88Q99836 296 aa15.13■□□□□ 0.01
VPS45-212ENST00000611412 MS4A1P11836 297 aa15.12■□□□□ 0.01
VPS45-212ENST00000611412 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
VPS45-212ENST00000611412 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
VPS45-212ENST00000611412 CWF19L2Q2TBE0 894 aaKnown RBP15.12■□□□□ 0.01
VPS45-212ENST00000611412 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
VPS45-212ENST00000611412 ARHGEF1Q92888 912 aaKnown RBP15.12■□□□□ 0.01
VPS45-212ENST00000611412 ANO8Q9HCE9 1232 aaPredicted RBP15.12■□□□□ 0.01
VPS45-212ENST00000611412 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
VPS45-212ENST00000611412 MAP3K15Q6ZN16 1313 aa15.11■□□□□ 0.01
VPS45-212ENST00000611412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.11■□□□□ 0.01
VPS45-212ENST00000611412 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
VPS45-212ENST00000611412 AKT1S1Q96B36 256 aa15.11■□□□□ 0.01
VPS45-212ENST00000611412 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
VPS45-212ENST00000611412 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
VPS45-212ENST00000611412 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
VPS45-212ENST00000611412 BEND3Q5T5X7 828 aa15.1■□□□□ 0.01
VPS45-212ENST00000611412 METTL22Q9BUU2 404 aaPredicted RBP15.1■□□□□ 0.01
VPS45-212ENST00000611412 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
VPS45-212ENST00000611412 CAMTA2O94983 1202 aa15.1■□□□□ 0.01
VPS45-212ENST00000611412 INTS3Q68E01 1043 aaKnown RBP15.1■□□□□ 0.01
VPS45-212ENST00000611412 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
VPS45-212ENST00000611412 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
VPS45-212ENST00000611412 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
VPS45-212ENST00000611412 SRCIN1Q9C0H9 1055 aa15.09■□□□□ 0.01
VPS45-212ENST00000611412 A0A087WZG4 1122 aa15.08■□□□□ 0.01
VPS45-212ENST00000611412 MSH5O43196 834 aa15.08■□□□□ 0.01
VPS45-212ENST00000611412 GPTP24298 496 aa15.08■□□□□ 0.01
VPS45-212ENST00000611412 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0.01
VPS45-212ENST00000611412 RFC4P35249 363 aa15.08■□□□□ 0
VPS45-212ENST00000611412 NEXNQ0ZGT2 675 aa15.08■□□□□ 0
VPS45-212ENST00000611412 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0
VPS45-212ENST00000611412 PXDNLA1KZ92 1463 aa15.07■□□□□ 0
VPS45-212ENST00000611412 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
VPS45-212ENST00000611412 STK32BQ9NY57 414 aa15.07■□□□□ 0
VPS45-212ENST00000611412 TUBGCP6Q96RT7 1819 aa15.07■□□□□ 0
VPS45-212ENST00000611412 C4AP0C0L4 1744 aa15.07■□□□□ 0
VPS45-212ENST00000611412 ZPR1O75312 459 aa15.07■□□□□ 0
VPS45-212ENST00000611412 SSFA2P28290 1259 aa15.07■□□□□ 0
VPS45-212ENST00000611412 SLC15A2Q16348 729 aa15.07■□□□□ 0
VPS45-212ENST00000611412 LINS1Q8NG48 757 aa15.07■□□□□ 0
VPS45-212ENST00000611412 MEIS3Q99687 375 aa15.07■□□□□ 0
VPS45-212ENST00000611412 BCL2L12Q9HB09 334 aa15.07■□□□□ 0
VPS45-212ENST00000611412 NARFQ9UHQ1 456 aa15.07■□□□□ 0
VPS45-212ENST00000611412 DDX19BQ9UMR2 479 aa15.07■□□□□ 0
VPS45-212ENST00000611412 NEURL1BA8MQ27 555 aa15.06■□□□□ 0
VPS45-212ENST00000611412 ERVV-1B6SEH8 477 aa15.06■□□□□ 0
VPS45-212ENST00000611412 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
VPS45-212ENST00000611412 TCIRG1Q13488 830 aa15.06■□□□□ 0
VPS45-212ENST00000611412 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
VPS45-212ENST00000611412 COL23A1Q86Y22 540 aaPredicted RBP15.06■□□□□ 0
VPS45-212ENST00000611412 C1orf115Q9H7X2 142 aa15.06■□□□□ 0
VPS45-212ENST00000611412 ATP10DQ9P241 1426 aa15.06■□□□□ 0
VPS45-212ENST00000611412 NUP98P52948 1817 aa15.05■□□□□ 0
VPS45-212ENST00000611412 FAM177BA6PVY3 158 aa15.05■□□□□ 0
VPS45-212ENST00000611412 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ 0
VPS45-212ENST00000611412 PNPLA7Q6ZV29 1317 aa15.05■□□□□ 0
VPS45-212ENST00000611412 USP42Q9H9J4 1324 aaKnown RBP15.05■□□□□ 0
VPS45-212ENST00000611412 BCORQ6W2J9 1755 aa15.05■□□□□ -0
VPS45-212ENST00000611412 AFDNP55196 1824 aaKnown RBP15.05■□□□□ -0
VPS45-212ENST00000611412 ADRA2BP18089 450 aa15.04■□□□□ -0
VPS45-212ENST00000611412 ISCA1Q9BUE6 129 aa15.04■□□□□ -0
VPS45-212ENST00000611412 USP44Q9H0E7 712 aa15.04■□□□□ -0
VPS45-212ENST00000611412 N4BP2Q86UW6 1770 aaPredicted RBP15.04■□□□□ -0
VPS45-212ENST00000611412 SCN7AQ01118 1682 aa15.04■□□□□ -0
VPS45-212ENST00000611412 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
VPS45-212ENST00000611412 ALDH1L1O75891 902 aa15.04■□□□□ -0
VPS45-212ENST00000611412 NBPF7P0C2Y1 421 aaPredicted RBP15.04■□□□□ -0
VPS45-212ENST00000611412 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
VPS45-212ENST00000611412 GCKRQ14397 625 aa15.04■□□□□ -0
VPS45-212ENST00000611412 TBC1D9BQ66K14 1250 aa15.04■□□□□ -0
VPS45-212ENST00000611412 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
VPS45-212ENST00000611412 NIP7Q9Y221 180 aaKnown RBP eCLIP15.04■□□□□ -0
VPS45-212ENST00000611412 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
VPS45-212ENST00000611412 PDGFDQ9GZP0 370 aaPredicted RBP15.03■□□□□ -0
VPS45-212ENST00000611412 CWC25Q9NXE8 425 aaPredicted RBP15.03■□□□□ -0
VPS45-212ENST00000611412 ZNF652Q9Y2D9 606 aa15.03■□□□□ -0
VPS45-212ENST00000611412 NLRP10Q86W26 655 aa15.02■□□□□ -0
VPS45-212ENST00000611412 ZNF34Q8IZ26 560 aa15.02■□□□□ -0
VPS45-212ENST00000611412 ZBTB40Q9NUA8 1239 aa15.02■□□□□ -0
VPS45-212ENST00000611412 ANKRD36CQ5JPF3 1778 aa15.02□□□□□ -0.01
VPS45-212ENST00000611412 GYS1P13807 737 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms