RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 GNAI1P63096 354 aa16.63■□□□□ 0.25
CD9-212ENST00000610354 GPR162Q16538 588 aa16.63■□□□□ 0.25
CD9-212ENST00000610354 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
CD9-212ENST00000610354 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
CD9-212ENST00000610354 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
CD9-212ENST00000610354 ERBB4Q15303 1308 aa16.62■□□□□ 0.25
CD9-212ENST00000610354 ANKRD31Q8N7Z5 1873 aa16.62■□□□□ 0.25
CD9-212ENST00000610354 DPEP1P16444 411 aa16.62■□□□□ 0.25
CD9-212ENST00000610354 TGFB2P61812 414 aa16.62■□□□□ 0.25
CD9-212ENST00000610354 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
CD9-212ENST00000610354 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
CD9-212ENST00000610354 DUSP27Q5VZP5 1158 aa16.61■□□□□ 0.25
CD9-212ENST00000610354 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
CD9-212ENST00000610354 NPM2Q86SE8 214 aaKnown RBP16.61■□□□□ 0.25
CD9-212ENST00000610354 SALL2Q9Y467 1007 aaPredicted RBP16.61■□□□□ 0.25
CD9-212ENST00000610354 CHD4Q14839 1912 aa16.6■□□□□ 0.25
CD9-212ENST00000610354 CALD1Q05682 793 aaKnown RBP16.6■□□□□ 0.25
CD9-212ENST00000610354 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
CD9-212ENST00000610354 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
CD9-212ENST00000610354 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
CD9-212ENST00000610354 RGL2O15211 777 aa16.59■□□□□ 0.25
CD9-212ENST00000610354 CHRNA5P30532 468 aa16.59■□□□□ 0.25
CD9-212ENST00000610354 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
CD9-212ENST00000610354 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
CD9-212ENST00000610354 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
CD9-212ENST00000610354 ERVV-1B6SEH8 477 aa16.58■□□□□ 0.24
CD9-212ENST00000610354 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
CD9-212ENST00000610354 HOXB7P09629 217 aa16.58■□□□□ 0.24
CD9-212ENST00000610354 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
CD9-212ENST00000610354 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
CD9-212ENST00000610354 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
CD9-212ENST00000610354 IL16Q14005 1332 aa16.57■□□□□ 0.24
CD9-212ENST00000610354 UTRNP46939 3433 aa16.57■□□□□ 0.24
CD9-212ENST00000610354 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
CD9-212ENST00000610354 HDGFL1Q5TGJ6 251 aa16.57■□□□□ 0.24
CD9-212ENST00000610354 ZBTB3Q9H5J0 574 aa16.57■□□□□ 0.24
CD9-212ENST00000610354 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
CD9-212ENST00000610354 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
CD9-212ENST00000610354 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
CD9-212ENST00000610354 COPS6Q7L5N1 327 aa16.56■□□□□ 0.24
CD9-212ENST00000610354 XAGE3Q8WTP9 111 aa16.56■□□□□ 0.24
CD9-212ENST00000610354 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
CD9-212ENST00000610354 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
CD9-212ENST00000610354 WDR63Q8IWG1 891 aa16.55■□□□□ 0.24
CD9-212ENST00000610354 COL11A2P13942 1736 aaPredicted RBP16.55■□□□□ 0.24
CD9-212ENST00000610354 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
CD9-212ENST00000610354 AIMP1Q12904 312 aaKnown RBP16.54■□□□□ 0.24
CD9-212ENST00000610354 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
CD9-212ENST00000610354 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
CD9-212ENST00000610354 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
CD9-212ENST00000610354 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
CD9-212ENST00000610354 ATP10DQ9P241 1426 aa16.54■□□□□ 0.24
CD9-212ENST00000610354 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
CD9-212ENST00000610354 ZNF521Q96K83 1311 aa16.54■□□□□ 0.24
CD9-212ENST00000610354 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 GRIN3BO60391 1043 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 MIER1Q8N108 512 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 CNBD1Q8NA66 436 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 BRIP1Q9BX63 1249 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 ANKRD36CQ5JPF3 1778 aa16.53■□□□□ 0.24
CD9-212ENST00000610354 GPTP24298 496 aa16.52■□□□□ 0.24
CD9-212ENST00000610354 YY1P25490 414 aa16.52■□□□□ 0.24
CD9-212ENST00000610354 NBPF5PQ86XG9 351 aaPredicted RBP16.52■□□□□ 0.24
CD9-212ENST00000610354 C2CD5Q86YS7 1000 aa16.52■□□□□ 0.24
CD9-212ENST00000610354 PIM2Q9P1W9 311 aa16.52■□□□□ 0.24
CD9-212ENST00000610354 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
CD9-212ENST00000610354 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.23
CD9-212ENST00000610354 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
CD9-212ENST00000610354 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
CD9-212ENST00000610354 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
CD9-212ENST00000610354 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
CD9-212ENST00000610354 TPTE2Q6XPS3 522 aa16.49■□□□□ 0.23
CD9-212ENST00000610354 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
CD9-212ENST00000610354 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
CD9-212ENST00000610354 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
CD9-212ENST00000610354 H0YIN7 160 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 TCERG1O14776 1098 aaKnown RBP16.48■□□□□ 0.23
CD9-212ENST00000610354 NTSR2O95665 410 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 PDE6BP35913 854 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 ST5P78524 1137 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
CD9-212ENST00000610354 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
CD9-212ENST00000610354 ERFEQ4G0M1 354 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
CD9-212ENST00000610354 NUTM1Q86Y26 1132 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 SLX4Q8IY92 1834 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
CD9-212ENST00000610354 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
CD9-212ENST00000610354 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
CD9-212ENST00000610354 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
CD9-212ENST00000610354 VAMP4O75379 141 aa16.46■□□□□ 0.23
CD9-212ENST00000610354 SRGNP10124 158 aa16.46■□□□□ 0.23
CD9-212ENST00000610354 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
CD9-212ENST00000610354 NPHP1O15259 732 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 POTEHQ6S545 545 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 G2E3Q7L622 706 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms