RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
LINC00343-212ENST00000608624 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
LINC00343-212ENST00000608624 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
LINC00343-212ENST00000608624 ZBTB1Q9Y2K1 713 aa11.78□□□□□ -0.52
LINC00343-212ENST00000608624 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
LINC00343-212ENST00000608624 GNPATO15228 680 aa11.77□□□□□ -0.53
LINC00343-212ENST00000608624 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
LINC00343-212ENST00000608624 A1BGP04217 495 aa11.77□□□□□ -0.53
LINC00343-212ENST00000608624 SLC15A2Q16348 729 aa11.77□□□□□ -0.53
LINC00343-212ENST00000608624 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
LINC00343-212ENST00000608624 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
LINC00343-212ENST00000608624 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
LINC00343-212ENST00000608624 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 ANXA1P04083 346 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 GNAI1P63096 354 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 NBPF14Q5TI25 921 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 NBPF10Q6P3W6 841 aaKnown RBP11.76□□□□□ -0.53
LINC00343-212ENST00000608624 NBPF15Q8N660 670 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 AK7Q96M32 723 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 IL16Q14005 1332 aa11.76□□□□□ -0.53
LINC00343-212ENST00000608624 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
LINC00343-212ENST00000608624 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
LINC00343-212ENST00000608624 PLCG2P16885 1265 aa11.75□□□□□ -0.53
LINC00343-212ENST00000608624 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
LINC00343-212ENST00000608624 WDR63Q8IWG1 891 aa11.75□□□□□ -0.53
LINC00343-212ENST00000608624 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
LINC00343-212ENST00000608624 YTHDC1Q96MU7 727 aaKnown RBP11.75□□□□□ -0.53
LINC00343-212ENST00000608624 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
LINC00343-212ENST00000608624 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
LINC00343-212ENST00000608624 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
LINC00343-212ENST00000608624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
LINC00343-212ENST00000608624 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
LINC00343-212ENST00000608624 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
LINC00343-212ENST00000608624 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
LINC00343-212ENST00000608624 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
LINC00343-212ENST00000608624 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
LINC00343-212ENST00000608624 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
LINC00343-212ENST00000608624 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
LINC00343-212ENST00000608624 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
LINC00343-212ENST00000608624 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
LINC00343-212ENST00000608624 SLFN5Q08AF3 891 aa11.73□□□□□ -0.53
LINC00343-212ENST00000608624 PDIA6Q15084 440 aa11.73□□□□□ -0.53
LINC00343-212ENST00000608624 MSL1Q68DK7 614 aa11.73□□□□□ -0.53
LINC00343-212ENST00000608624 LRP10Q7Z4F1 713 aa11.73□□□□□ -0.53
LINC00343-212ENST00000608624 COL15A1P39059 1388 aa11.72□□□□□ -0.53
LINC00343-212ENST00000608624 ZBTB7AO95365 584 aa11.72□□□□□ -0.53
LINC00343-212ENST00000608624 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
LINC00343-212ENST00000608624 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
LINC00343-212ENST00000608624 TMEM106CQ9BVX2 250 aa11.72□□□□□ -0.53
LINC00343-212ENST00000608624 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
LINC00343-212ENST00000608624 ZNF330Q9Y3S2 320 aaPredicted RBP11.72□□□□□ -0.53
LINC00343-212ENST00000608624 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
LINC00343-212ENST00000608624 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 STARD3NLO95772 234 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 MYL6BP14649 208 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 TRMT2AQ8IZ69 625 aaKnown RBP11.71□□□□□ -0.53
LINC00343-212ENST00000608624 NGEFQ8N5V2 710 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
LINC00343-212ENST00000608624 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
LINC00343-212ENST00000608624 SSFA2P28290 1259 aa11.7□□□□□ -0.54
LINC00343-212ENST00000608624 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
LINC00343-212ENST00000608624 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
LINC00343-212ENST00000608624 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
LINC00343-212ENST00000608624 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 E9PSI1 815 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 SNPHO15079 494 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 TWISTNBQ3B726 338 aaPredicted RBP11.69□□□□□ -0.54
LINC00343-212ENST00000608624 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 MYH16Q9H6N6 1097 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 TBC1D2BQ9UPU7 963 aa11.69□□□□□ -0.54
LINC00343-212ENST00000608624 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
LINC00343-212ENST00000608624 VAMP4O75379 141 aa11.68□□□□□ -0.54
LINC00343-212ENST00000608624 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
LINC00343-212ENST00000608624 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 HOXB7P09629 217 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 GYS1P13807 737 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
LINC00343-212ENST00000608624 PTGER2P43116 358 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 FKBP8Q14318 412 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 USPL1Q5W0Q7 1092 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 G2E3Q7L622 706 aa11.67□□□□□ -0.54
LINC00343-212ENST00000608624 PHAXQ9H814 394 aaKnown RBP11.67□□□□□ -0.54
LINC00343-212ENST00000608624 HLFQ16534 295 aa11.66□□□□□ -0.54
LINC00343-212ENST00000608624 XAGE3Q8WTP9 111 aa11.66□□□□□ -0.54
LINC00343-212ENST00000608624 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
LINC00343-212ENST00000608624 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
LINC00343-212ENST00000608624 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
LINC00343-212ENST00000608624 RFC4P35249 363 aa11.65□□□□□ -0.54
LINC00343-212ENST00000608624 DDR1Q08345 913 aa11.65□□□□□ -0.54
LINC00343-212ENST00000608624 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
LINC00343-212ENST00000608624 DZIP3Q86Y13 1208 aaKnown RBP11.65□□□□□ -0.54
LINC00343-212ENST00000608624 ARXQ96QS3 562 aa11.65□□□□□ -0.54
LINC00343-212ENST00000608624 ZBTB3Q9H5J0 574 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms