RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 KIAA1551Q9HCM1 1747 aa25.09■■□□□ 1.61
CTSA-217ENST00000607482 AFDNP55196 1824 aaKnown RBP25.08■■□□□ 1.61
CTSA-217ENST00000607482 FAM177BA6PVY3 158 aa25.08■■□□□ 1.61
CTSA-217ENST00000607482 TPTE2Q6XPS3 522 aa25.08■■□□□ 1.61
CTSA-217ENST00000607482 KDM3BQ7LBC6 1761 aa25.08■■□□□ 1.6
CTSA-217ENST00000607482 ANP32CO43423 234 aa25.07■■□□□ 1.6
CTSA-217ENST00000607482 RGL2O15211 777 aa25.05■■□□□ 1.6
CTSA-217ENST00000607482 CALD1Q05682 793 aaKnown RBP25.04■■□□□ 1.6
CTSA-217ENST00000607482 C9orf131Q5VYM1 1079 aa25.04■■□□□ 1.6
CTSA-217ENST00000607482 TRIM35Q9UPQ4 493 aa25.04■■□□□ 1.6
CTSA-217ENST00000607482 ERBB4Q15303 1308 aa25.04■■□□□ 1.6
CTSA-217ENST00000607482 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 LAMB4A4D0S4 1761 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 ERVV-1B6SEH8 477 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 APAF1O14727 1248 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 C1QTNF8P60827 252 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 HLFQ16534 295 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 NECTIN2Q92692 538 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 ZBTB3Q9H5J0 574 aa25.03■■□□□ 1.6
CTSA-217ENST00000607482 ZNF219Q9P2Y4 722 aaPredicted RBP25.03■■□□□ 1.6
CTSA-217ENST00000607482 RNF181Q9P0P0 153 aa25.02■■□□□ 1.6
CTSA-217ENST00000607482 MAP3K15Q6ZN16 1313 aa25.02■■□□□ 1.6
CTSA-217ENST00000607482 BRCA1P38398 1863 aaKnown RBP25.01■■□□□ 1.59
CTSA-217ENST00000607482 CHL1O00533 1208 aa25.01■■□□□ 1.59
CTSA-217ENST00000607482 TTLL7Q6ZT98 887 aa25.01■■□□□ 1.59
CTSA-217ENST00000607482 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
CTSA-217ENST00000607482 NYXQ9GZU5 481 aa25.01■■□□□ 1.59
CTSA-217ENST00000607482 ADCY9O60503 1353 aa25■■□□□ 1.59
CTSA-217ENST00000607482 BCORQ6W2J9 1755 aa25■■□□□ 1.59
CTSA-217ENST00000607482 MASTLQ96GX5 879 aa24.99■■□□□ 1.59
CTSA-217ENST00000607482 ARFGEF1Q9Y6D6 1849 aa24.99■■□□□ 1.59
CTSA-217ENST00000607482 GPTP24298 496 aa24.98■■□□□ 1.59
CTSA-217ENST00000607482 STYK1Q6J9G0 422 aa24.98■■□□□ 1.59
CTSA-217ENST00000607482 CFAP44Q96MT7 982 aa24.98■■□□□ 1.59
CTSA-217ENST00000607482 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
CTSA-217ENST00000607482 C21orf2O43822 256 aa24.97■■□□□ 1.59
CTSA-217ENST00000607482 AIMP1Q12904 312 aaKnown RBP24.97■■□□□ 1.59
CTSA-217ENST00000607482 ANXA1P04083 346 aa24.95■■□□□ 1.58
CTSA-217ENST00000607482 SRGNP10124 158 aa24.95■■□□□ 1.58
CTSA-217ENST00000607482 LMNB1P20700 586 aa24.95■■□□□ 1.58
CTSA-217ENST00000607482 GNAI1P63096 354 aa24.95■■□□□ 1.58
CTSA-217ENST00000607482 RASSF7Q02833 373 aa24.95■■□□□ 1.58
CTSA-217ENST00000607482 HDGFL1Q5TGJ6 251 aa24.95■■□□□ 1.58
CTSA-217ENST00000607482 SENP3-EIF4A1A0A087X0R7 540 aa24.94■■□□□ 1.58
CTSA-217ENST00000607482 NPR1P16066 1061 aa24.94■■□□□ 1.58
CTSA-217ENST00000607482 KRT24Q2M2I5 525 aa24.94■■□□□ 1.58
CTSA-217ENST00000607482 SOGA3Q5TF21 947 aa24.94■■□□□ 1.58
CTSA-217ENST00000607482 KDM2BQ8NHM5 1336 aa24.93■■□□□ 1.58
CTSA-217ENST00000607482 PRPF40BQ6NWY9 871 aaKnown RBP24.93■■□□□ 1.58
CTSA-217ENST00000607482 PPP1R42Q7Z4L9 355 aa24.93■■□□□ 1.58
CTSA-217ENST00000607482 PROSER3Q2NL68 480 aa24.92■■□□□ 1.58
CTSA-217ENST00000607482 GIGYF2Q6Y7W6 1299 aaKnown RBP24.92■■□□□ 1.58
CTSA-217ENST00000607482 COPS6Q7L5N1 327 aa24.92■■□□□ 1.58
CTSA-217ENST00000607482 NUTM1Q86Y26 1132 aa24.92■■□□□ 1.58
CTSA-217ENST00000607482 C16orf71Q8IYS4 520 aaPredicted RBP24.92■■□□□ 1.58
CTSA-217ENST00000607482 DDX21Q9NR30 783 aaKnown RBP eCLIP24.92■■□□□ 1.58
CTSA-217ENST00000607482 MBIPQ9NS73 344 aa24.92■■□□□ 1.58
CTSA-217ENST00000607482 IFT57Q9NWB7 429 aa24.92■■□□□ 1.58
CTSA-217ENST00000607482 DLEC1Q9Y238 1755 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 HOXB7P09629 217 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 PDIA6Q15084 440 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 CCDC184Q52MB2 194 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 HSP90AB3PQ58FF7 597 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 DUSP27Q5VZP5 1158 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 XAGE3Q8WTP9 111 aa24.91■■□□□ 1.58
CTSA-217ENST00000607482 RPGRQ92834 1020 aaKnown RBP24.91■■□□□ 1.58
CTSA-217ENST00000607482 ANKRD31Q8N7Z5 1873 aa24.9■■□□□ 1.58
CTSA-217ENST00000607482 ALDH1B1P30837 517 aa24.9■■□□□ 1.58
CTSA-217ENST00000607482 ERFEQ4G0M1 354 aa24.9■■□□□ 1.58
CTSA-217ENST00000607482 PARP10Q53GL7 1025 aa24.9■■□□□ 1.58
CTSA-217ENST00000607482 CHPF2Q9P2E5 772 aa24.9■■□□□ 1.58
CTSA-217ENST00000607482 DBF4Q9UBU7 674 aaPredicted RBP24.9■■□□□ 1.58
CTSA-217ENST00000607482 SUSD4Q5VX71 490 aa24.88■■□□□ 1.57
CTSA-217ENST00000607482 ZNF34Q8IZ26 560 aa24.88■■□□□ 1.57
CTSA-217ENST00000607482 UTP14AQ9BVJ6 771 aaKnown RBP24.88■■□□□ 1.57
CTSA-217ENST00000607482 CHMP4AQ9BY43 222 aa24.88■■□□□ 1.57
CTSA-217ENST00000607482 TAOK3Q9H2K8 898 aa24.88■■□□□ 1.57
CTSA-217ENST00000607482 ELL2O00472 640 aaPredicted RBP24.87■■□□□ 1.57
CTSA-217ENST00000607482 HYPKQ9NX55 129 aa24.86■■□□□ 1.57
CTSA-217ENST00000607482 NUP98P52948 1817 aa24.86■■□□□ 1.57
CTSA-217ENST00000607482 UBN2Q6ZU65 1347 aa24.86■■□□□ 1.57
CTSA-217ENST00000607482 ZC3H4Q9UPT8 1303 aaKnown RBP24.86■■□□□ 1.57
CTSA-217ENST00000607482 KLRG2A4D1S0 409 aaPredicted RBP24.85■■□□□ 1.57
CTSA-217ENST00000607482 NFKBIEO00221 500 aa24.85■■□□□ 1.57
CTSA-217ENST00000607482 CCDC93Q567U6 631 aa24.85■■□□□ 1.57
CTSA-217ENST00000607482 TMX4Q9H1E5 349 aaPredicted RBP24.85■■□□□ 1.57
CTSA-217ENST00000607482 NMRK2Q9NPI5 230 aa24.85■■□□□ 1.57
CTSA-217ENST00000607482 COL11A2P13942 1736 aaPredicted RBP24.85■■□□□ 1.57
CTSA-217ENST00000607482 DPY19L2Q6NUT2 758 aa24.84■■□□□ 1.57
CTSA-217ENST00000607482 LRP10Q7Z4F1 713 aa24.84■■□□□ 1.57
CTSA-217ENST00000607482 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
CTSA-217ENST00000607482 KIF3CO14782 793 aa24.83■■□□□ 1.57
CTSA-217ENST00000607482 ZNF853P0CG23 659 aa24.83■■□□□ 1.57
CTSA-217ENST00000607482 ANKRD13DQ6ZTN6 518 aa24.83■■□□□ 1.57
CTSA-217ENST00000607482 RBM17Q96I25 401 aaKnown RBP24.83■■□□□ 1.57
CTSA-217ENST00000607482 NLRP3Q96P20 1036 aa24.83■■□□□ 1.57
CTSA-217ENST00000607482 TCIRG1Q13488 830 aa24.82■■□□□ 1.56
CTSA-217ENST00000607482 RTKN2Q8IZC4 609 aa24.82■■□□□ 1.56
CTSA-217ENST00000607482 RRAGCQ9HB90 399 aa24.82■■□□□ 1.56
CTSA-217ENST00000607482 TRMT112Q9UI30 125 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms