RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 BCS1LQ9Y276 419 aa21.49■■□□□ 1.03
LINC00240-203ENST00000606878 MAP3K15Q6ZN16 1313 aa21.49■■□□□ 1.03
LINC00240-203ENST00000606878 PXDNLA1KZ92 1463 aa21.48■■□□□ 1.03
LINC00240-203ENST00000606878 CHRNA5P30532 468 aa21.48■■□□□ 1.03
LINC00240-203ENST00000606878 HDGFL1Q5TGJ6 251 aa21.48■■□□□ 1.03
LINC00240-203ENST00000606878 PRR5LQ6MZQ0 368 aa21.48■■□□□ 1.03
LINC00240-203ENST00000606878 TPTE2Q6XPS3 522 aa21.48■■□□□ 1.03
LINC00240-203ENST00000606878 NBPF5PQ86XG9 351 aaPredicted RBP21.48■■□□□ 1.03
LINC00240-203ENST00000606878 BRIP1Q9BX63 1249 aa21.48■■□□□ 1.03
LINC00240-203ENST00000606878 DDX21Q9NR30 783 aaKnown RBP eCLIP21.48■■□□□ 1.03
LINC00240-203ENST00000606878 SALL2Q9Y467 1007 aaPredicted RBP21.48■■□□□ 1.03
LINC00240-203ENST00000606878 H0YIN7 160 aa21.47■■□□□ 1.03
LINC00240-203ENST00000606878 CNBD1Q8NA66 436 aa21.47■■□□□ 1.03
LINC00240-203ENST00000606878 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
LINC00240-203ENST00000606878 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
LINC00240-203ENST00000606878 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
LINC00240-203ENST00000606878 ANXA1P04083 346 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 PDE6BP35913 854 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 ST5P78524 1137 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 DALRD3Q5D0E6 543 aaKnown RBP21.46■■□□□ 1.03
LINC00240-203ENST00000606878 COPS6Q7L5N1 327 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 LRP10Q7Z4F1 713 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 ZBTB3Q9H5J0 574 aa21.46■■□□□ 1.03
LINC00240-203ENST00000606878 DBF4Q9UBU7 674 aaPredicted RBP21.46■■□□□ 1.03
LINC00240-203ENST00000606878 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
LINC00240-203ENST00000606878 C2CD5Q86YS7 1000 aa21.45■■□□□ 1.02
LINC00240-203ENST00000606878 WDR63Q8IWG1 891 aa21.45■■□□□ 1.02
LINC00240-203ENST00000606878 CCDC24Q8N4L8 307 aa21.45■■□□□ 1.02
LINC00240-203ENST00000606878 IL16Q14005 1332 aa21.45■■□□□ 1.02
LINC00240-203ENST00000606878 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
LINC00240-203ENST00000606878 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
LINC00240-203ENST00000606878 CHPF2Q9P2E5 772 aa21.44■■□□□ 1.02
LINC00240-203ENST00000606878 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
LINC00240-203ENST00000606878 GIGYF2Q6Y7W6 1299 aaKnown RBP21.43■■□□□ 1.02
LINC00240-203ENST00000606878 C8orf58Q8NAV2 365 aa21.43■■□□□ 1.02
LINC00240-203ENST00000606878 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
LINC00240-203ENST00000606878 CCER2I3L3R5 266 aa21.42■■□□□ 1.02
LINC00240-203ENST00000606878 ARHGAP27Q6ZUM4 889 aa21.42■■□□□ 1.02
LINC00240-203ENST00000606878 KIF13BQ9NQT8 1826 aa21.41■■□□□ 1.02
LINC00240-203ENST00000606878 GPTP24298 496 aa21.41■■□□□ 1.02
LINC00240-203ENST00000606878 ZNF34Q8IZ26 560 aa21.41■■□□□ 1.02
LINC00240-203ENST00000606878 TTLL6Q8N841 843 aa21.41■■□□□ 1.02
LINC00240-203ENST00000606878 TSR2Q969E8 191 aaKnown RBP21.41■■□□□ 1.02
LINC00240-203ENST00000606878 NYXQ9GZU5 481 aa21.41■■□□□ 1.02
LINC00240-203ENST00000606878 LAMB4A4D0S4 1761 aa21.41■■□□□ 1.02
LINC00240-203ENST00000606878 HSP90AB3PQ58FF7 597 aa21.4■■□□□ 1.02
LINC00240-203ENST00000606878 ZNF622Q969S3 477 aaKnown RBP eCLIP21.4■■□□□ 1.02
LINC00240-203ENST00000606878 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.01
LINC00240-203ENST00000606878 ANKRD13DQ6ZTN6 518 aa21.39■■□□□ 1.01
LINC00240-203ENST00000606878 SCN7AQ01118 1682 aa21.38■■□□□ 1.01
LINC00240-203ENST00000606878 PARP10Q53GL7 1025 aa21.38■■□□□ 1.01
LINC00240-203ENST00000606878 UTRNP46939 3433 aa21.38■■□□□ 1.01
LINC00240-203ENST00000606878 SUSD4Q5VX71 490 aa21.37■■□□□ 1.01
LINC00240-203ENST00000606878 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
LINC00240-203ENST00000606878 PPP1R42Q7Z4L9 355 aa21.37■■□□□ 1.01
LINC00240-203ENST00000606878 TSPYL6Q8N831 410 aa21.37■■□□□ 1.01
LINC00240-203ENST00000606878 PLBD2Q8NHP8 589 aa21.37■■□□□ 1.01
LINC00240-203ENST00000606878 AFDNP55196 1824 aaKnown RBP21.36■■□□□ 1.01
LINC00240-203ENST00000606878 N4BP2Q86UW6 1770 aaPredicted RBP21.36■■□□□ 1.01
LINC00240-203ENST00000606878 NRXN2Q9P2S2 1712 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 SRGNP10124 158 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 TCIRG1Q13488 830 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 MASTLQ96GX5 879 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 ATP10DQ9P241 1426 aa21.36■■□□□ 1.01
LINC00240-203ENST00000606878 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
LINC00240-203ENST00000606878 STYK1Q6J9G0 422 aa21.35■■□□□ 1.01
LINC00240-203ENST00000606878 GOLGB1Q14789 3259 aaKnown RBP21.34■■□□□ 1.01
LINC00240-203ENST00000606878 KLRG2A4D1S0 409 aaPredicted RBP21.34■■□□□ 1.01
LINC00240-203ENST00000606878 ERFEQ4G0M1 354 aa21.34■■□□□ 1.01
LINC00240-203ENST00000606878 NUTM1Q86Y26 1132 aa21.34■■□□□ 1.01
LINC00240-203ENST00000606878 ZNF784Q8NCA9 323 aaPredicted RBP21.34■■□□□ 1.01
LINC00240-203ENST00000606878 UTP14AQ9BVJ6 771 aaKnown RBP21.34■■□□□ 1.01
LINC00240-203ENST00000606878 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
LINC00240-203ENST00000606878 UBN2Q6ZU65 1347 aa21.33■■□□□ 1.01
LINC00240-203ENST00000606878 NPR1P16066 1061 aa21.33■■□□□ 1.01
LINC00240-203ENST00000606878 STK31Q9BXU1 1019 aa21.33■■□□□ 1.01
LINC00240-203ENST00000606878 BCORQ6W2J9 1755 aa21.33■■□□□ 1
LINC00240-203ENST00000606878 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
LINC00240-203ENST00000606878 CHD4Q14839 1912 aa21.32■■□□□ 1
LINC00240-203ENST00000606878 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
LINC00240-203ENST00000606878 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
LINC00240-203ENST00000606878 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
LINC00240-203ENST00000606878 NLRP10Q86W26 655 aa21.31■■□□□ 1
LINC00240-203ENST00000606878 NTSR2O95665 410 aa21.3■■□□□ 1
LINC00240-203ENST00000606878 DDX58O95786 925 aaKnown RBP21.3■■□□□ 1
LINC00240-203ENST00000606878 ALDH1B1P30837 517 aa21.3■■□□□ 1
LINC00240-203ENST00000606878 EXOSC9Q06265 439 aaKnown RBP21.3■■□□□ 1
LINC00240-203ENST00000606878 SLC10A5Q5PT55 438 aa21.3■■□□□ 1
LINC00240-203ENST00000606878 SPINK5Q9NQ38 1064 aaPredicted RBP21.3■■□□□ 1
LINC00240-203ENST00000606878 IBTKQ9P2D0 1353 aaPredicted RBP21.3■■□□□ 1
LINC00240-203ENST00000606878 TCERG1O14776 1098 aaKnown RBP21.29■■□□□ 1
LINC00240-203ENST00000606878 TRMT112Q9UI30 125 aaKnown RBP21.29■■□□□ 1
LINC00240-203ENST00000606878 C21orf2O43822 256 aa21.28■■□□□ 1
LINC00240-203ENST00000606878 VAMP4O75379 141 aa21.28■■□□□ 1
LINC00240-203ENST00000606878 SLC4A2P04920 1241 aa21.28■■□□□ 1
LINC00240-203ENST00000606878 NLRP3Q96P20 1036 aa21.28■■□□□ 1
LINC00240-203ENST00000606878 ISCA1Q9BUE6 129 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms