RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 HOXB7P09629 217 aa16.65■□□□□ 0.26
SHROOM1-207ENST00000606676 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
SHROOM1-207ENST00000606676 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
SHROOM1-207ENST00000606676 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
SHROOM1-207ENST00000606676 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.26
SHROOM1-207ENST00000606676 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
SHROOM1-207ENST00000606676 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
SHROOM1-207ENST00000606676 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
SHROOM1-207ENST00000606676 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
SHROOM1-207ENST00000606676 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SHROOM1-207ENST00000606676 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
SHROOM1-207ENST00000606676 CHRNA5P30532 468 aa16.63■□□□□ 0.25
SHROOM1-207ENST00000606676 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
SHROOM1-207ENST00000606676 DDX21Q9NR30 783 aaKnown RBP eCLIP16.63■□□□□ 0.25
SHROOM1-207ENST00000606676 IL16Q14005 1332 aa16.63■□□□□ 0.25
SHROOM1-207ENST00000606676 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
SHROOM1-207ENST00000606676 HDGFL1Q5TGJ6 251 aa16.62■□□□□ 0.25
SHROOM1-207ENST00000606676 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
SHROOM1-207ENST00000606676 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
SHROOM1-207ENST00000606676 TSR2Q969E8 191 aaKnown RBP16.62■□□□□ 0.25
SHROOM1-207ENST00000606676 CHPF2Q9P2E5 772 aa16.62■□□□□ 0.25
SHROOM1-207ENST00000606676 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
SHROOM1-207ENST00000606676 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
SHROOM1-207ENST00000606676 ZBTB3Q9H5J0 574 aa16.61■□□□□ 0.25
SHROOM1-207ENST00000606676 NIP7Q9Y221 180 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHROOM1-207ENST00000606676 YY1P25490 414 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 TSPYL6Q8N831 410 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-207ENST00000606676 GIGYF2Q6Y7W6 1299 aaKnown RBP16.59■□□□□ 0.25
SHROOM1-207ENST00000606676 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
SHROOM1-207ENST00000606676 ZNF34Q8IZ26 560 aa16.59■□□□□ 0.25
SHROOM1-207ENST00000606676 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
SHROOM1-207ENST00000606676 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
SHROOM1-207ENST00000606676 AIMP1Q12904 312 aaKnown RBP16.58■□□□□ 0.24
SHROOM1-207ENST00000606676 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
SHROOM1-207ENST00000606676 UBN2Q6ZU65 1347 aa16.57■□□□□ 0.24
SHROOM1-207ENST00000606676 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
SHROOM1-207ENST00000606676 DALRD3Q5D0E6 543 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-207ENST00000606676 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-207ENST00000606676 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
SHROOM1-207ENST00000606676 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
SHROOM1-207ENST00000606676 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 H0YIN7 160 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 GPTP24298 496 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 PDE6BP35913 854 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 ST5P78524 1137 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
SHROOM1-207ENST00000606676 ANKRD31Q8N7Z5 1873 aa16.55■□□□□ 0.24
SHROOM1-207ENST00000606676 NUP98P52948 1817 aa16.55■□□□□ 0.24
SHROOM1-207ENST00000606676 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
SHROOM1-207ENST00000606676 NPHP1O15259 732 aa16.55■□□□□ 0.24
SHROOM1-207ENST00000606676 SUSD4Q5VX71 490 aa16.55■□□□□ 0.24
SHROOM1-207ENST00000606676 ANKRD13DQ6ZTN6 518 aa16.54■□□□□ 0.24
SHROOM1-207ENST00000606676 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
SHROOM1-207ENST00000606676 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
SHROOM1-207ENST00000606676 NTSR2O95665 410 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 TWISTNBQ3B726 338 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 MIER1Q8N108 512 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 TTLL6Q8N841 843 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 PLBD2Q8NHP8 589 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 NYXQ9GZU5 481 aa16.53■□□□□ 0.24
SHROOM1-207ENST00000606676 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
SHROOM1-207ENST00000606676 SRGNP10124 158 aa16.52■□□□□ 0.24
SHROOM1-207ENST00000606676 EXOSC9Q06265 439 aaKnown RBP16.52■□□□□ 0.24
SHROOM1-207ENST00000606676 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
SHROOM1-207ENST00000606676 ERFEQ4G0M1 354 aa16.52■□□□□ 0.24
SHROOM1-207ENST00000606676 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 CHD4Q14839 1912 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 HSP90AB3PQ58FF7 597 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 ZNF622Q969S3 477 aaKnown RBP eCLIP16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 CHMP4AQ9BY43 222 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
SHROOM1-207ENST00000606676 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
SHROOM1-207ENST00000606676 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
SHROOM1-207ENST00000606676 VAMP4O75379 141 aa16.5■□□□□ 0.23
SHROOM1-207ENST00000606676 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
SHROOM1-207ENST00000606676 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
SHROOM1-207ENST00000606676 MASTLQ96GX5 879 aa16.5■□□□□ 0.23
SHROOM1-207ENST00000606676 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
SHROOM1-207ENST00000606676 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-207ENST00000606676 ISCA1Q9BUE6 129 aa16.49■□□□□ 0.23
SHROOM1-207ENST00000606676 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
SHROOM1-207ENST00000606676 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
SHROOM1-207ENST00000606676 RIC1Q4ADV7 1423 aa16.48■□□□□ 0.23
SHROOM1-207ENST00000606676 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
SHROOM1-207ENST00000606676 CRY2Q49AN0 593 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms