RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
FOCAD-214ENST00000604828 RRAGDQ9NQL2 400 aaPredicted RBP12.49□□□□□ -0.41
FOCAD-214ENST00000604828 UBTFL1P0CB47 393 aaPredicted RBP12.48□□□□□ -0.41
FOCAD-214ENST00000604828 IL2RBP14784 551 aa12.48□□□□□ -0.41
FOCAD-214ENST00000604828 POLA2Q14181 598 aa12.48□□□□□ -0.41
FOCAD-214ENST00000604828 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
FOCAD-214ENST00000604828 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
FOCAD-214ENST00000604828 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
FOCAD-214ENST00000604828 LRRFIP2Q9Y608 721 aaKnown RBP12.48□□□□□ -0.41
FOCAD-214ENST00000604828 MEGF6O75095 1541 aa12.47□□□□□ -0.41
FOCAD-214ENST00000604828 CHMLP26374 656 aa12.47□□□□□ -0.41
FOCAD-214ENST00000604828 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
FOCAD-214ENST00000604828 ZNF445P59923 1031 aa12.46□□□□□ -0.41
FOCAD-214ENST00000604828 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
FOCAD-214ENST00000604828 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.41
FOCAD-214ENST00000604828 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
FOCAD-214ENST00000604828 CLCN1P35523 988 aa12.45□□□□□ -0.42
FOCAD-214ENST00000604828 CUL4AQ13619 759 aa12.45□□□□□ -0.42
FOCAD-214ENST00000604828 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
FOCAD-214ENST00000604828 ARXQ96QS3 562 aa12.45□□□□□ -0.42
FOCAD-214ENST00000604828 DDX49Q9Y6V7 483 aaKnown RBP12.45□□□□□ -0.42
FOCAD-214ENST00000604828 EXOC5O00471 708 aa12.45□□□□□ -0.42
FOCAD-214ENST00000604828 LMBRD1Q9NUN5 540 aa12.45□□□□□ -0.42
FOCAD-214ENST00000604828 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
FOCAD-214ENST00000604828 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
FOCAD-214ENST00000604828 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
FOCAD-214ENST00000604828 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
FOCAD-214ENST00000604828 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
FOCAD-214ENST00000604828 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
FOCAD-214ENST00000604828 NEK4P51957 841 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 HSP90AB4PQ58FF6 505 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 BEND3Q5T5X7 828 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
FOCAD-214ENST00000604828 ZDHHC9Q9Y397 364 aa12.43□□□□□ -0.42
FOCAD-214ENST00000604828 TRIM6-TRIM34B2RNG4 842 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
FOCAD-214ENST00000604828 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 FAM196AQ6ZSG2 479 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 PPP1R9BQ96SB3 815 aa12.42□□□□□ -0.42
FOCAD-214ENST00000604828 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
FOCAD-214ENST00000604828 MTX1Q13505 466 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 PKP1Q13835 747 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 PLEKHO1Q53GL0 409 aaPredicted RBP12.41□□□□□ -0.42
FOCAD-214ENST00000604828 RHPN1Q8TCX5 695 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
FOCAD-214ENST00000604828 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
FOCAD-214ENST00000604828 ANO2Q9NQ90 1003 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 ADCY9O60503 1353 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 HEG1Q9ULI3 1381 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 TRIM37O94972 964 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 HSPA4P34932 840 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 PALD1Q9ULE6 856 aa12.41□□□□□ -0.42
FOCAD-214ENST00000604828 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
FOCAD-214ENST00000604828 ALDH1L1O75891 902 aa12.4□□□□□ -0.42
FOCAD-214ENST00000604828 BRD1O95696 1058 aa12.4□□□□□ -0.42
FOCAD-214ENST00000604828 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
FOCAD-214ENST00000604828 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
FOCAD-214ENST00000604828 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
FOCAD-214ENST00000604828 CHPF2Q9P2E5 772 aa12.4□□□□□ -0.42
FOCAD-214ENST00000604828 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
FOCAD-214ENST00000604828 TTC41PQ6P2S7 1318 aa12.4□□□□□ -0.42
FOCAD-214ENST00000604828 TEFQ10587 303 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
FOCAD-214ENST00000604828 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 RAD50Q92878 1312 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 ESPNB1AK53 854 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 MBD3O95983 291 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
FOCAD-214ENST00000604828 ZSCAN23Q3MJ62 389 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
FOCAD-214ENST00000604828 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
FOCAD-214ENST00000604828 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 CYP27B1O15528 508 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 SGSM2O43147 1006 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
FOCAD-214ENST00000604828 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
FOCAD-214ENST00000604828 BCL9O00512 1426 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 KCNQ2O43526 872 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
FOCAD-214ENST00000604828 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
FOCAD-214ENST00000604828 CAVIN1Q6NZI2 390 aaKnown RBP12.38□□□□□ -0.43
FOCAD-214ENST00000604828 NUTM1Q86Y26 1132 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
FOCAD-214ENST00000604828 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms