RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 TOPAZ1Q8N9V7 1692 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 CRYBG1Q9Y4K1 1723 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 PTH1RQ03431 593 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 FAM200AQ8TCP9 573 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 KCNB2Q92953 911 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 ZSWIM6Q9HCJ5 1215 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 FLT4P35916 1363 aa18.21■□□□□ 0.51
LYSMD4-211ENST00000604213 FMN2Q9NZ56 1722 aa18.21■□□□□ 0.5
LYSMD4-211ENST00000604213 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
LYSMD4-211ENST00000604213 TM6SF1Q9BZW5 370 aa18.2■□□□□ 0.5
LYSMD4-211ENST00000604213 VPS37CA5D8V6 355 aaPredicted RBP18.2■□□□□ 0.5
LYSMD4-211ENST00000604213 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
LYSMD4-211ENST00000604213 PTGS1P23219 599 aa18.2■□□□□ 0.5
LYSMD4-211ENST00000604213 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
LYSMD4-211ENST00000604213 TTC6Q86TZ1 520 aa18.19■□□□□ 0.5
LYSMD4-211ENST00000604213 PHAXQ9H814 394 aaKnown RBP18.19■□□□□ 0.5
LYSMD4-211ENST00000604213 NUTM2FA1L443 756 aa18.19■□□□□ 0.5
LYSMD4-211ENST00000604213 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
LYSMD4-211ENST00000604213 IL17REQ8NFR9 667 aa18.19■□□□□ 0.5
LYSMD4-211ENST00000604213 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
LYSMD4-211ENST00000604213 TYRO3Q06418 890 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 MAP3K11Q16584 847 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 ME3Q16798 604 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 AGLP35573 1532 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 LIG1P18858 919 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 RUFY2Q8WXA3 655 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 NUP62CLQ9H1M0 184 aa18.18■□□□□ 0.5
LYSMD4-211ENST00000604213 TTC41PQ6P2S7 1318 aa18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 ELP1O95163 1332 aa18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 HDGFL1Q5TGJ6 251 aa18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 LUZP1Q86V48 1076 aa18.17■□□□□ 0.5
LYSMD4-211ENST00000604213 KRT85P78386 507 aa18.16■□□□□ 0.5
LYSMD4-211ENST00000604213 AMPHP49418 695 aa18.16■□□□□ 0.5
LYSMD4-211ENST00000604213 CAMK4Q16566 473 aa18.16■□□□□ 0.5
LYSMD4-211ENST00000604213 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
LYSMD4-211ENST00000604213 TTC21AQ8NDW8 1320 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 CCDC186Q7Z3E2 898 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 TPCN1Q9ULQ1 816 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 CDC37L1Q7L3B6 337 aa18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-211ENST00000604213 KIF20AO95235 890 aa18.14■□□□□ 0.49
LYSMD4-211ENST00000604213 LRMPQ12912 555 aa18.14■□□□□ 0.49
LYSMD4-211ENST00000604213 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
LYSMD4-211ENST00000604213 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 SYCP1Q15431 976 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 BEND3Q5T5X7 828 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 FAM173BQ6P4H8 233 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 ANO6Q4KMQ2 910 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 PLA2G4DQ86XP0 818 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 CKAP2LQ8IYA6 745 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 FEZ1Q99689 392 aa18.13■□□□□ 0.49
LYSMD4-211ENST00000604213 ZNF75DP51815 510 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 RBM43Q6ZSC3 357 aaKnown RBP18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 TNMDQ9H2S6 317 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 NRBP1Q9UHY1 535 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 SMTNL1A8MU46 457 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 CREB3L3Q68CJ9 461 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 ECHDC1Q9NTX5 307 aa18.12■□□□□ 0.49
LYSMD4-211ENST00000604213 ZKSCAN1P17029 563 aaPredicted RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 MLECQ14165 292 aa18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 PDCP20941 246 aa18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 OS9Q13438 667 aaPredicted RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 TDRD7Q8NHU6 1098 aaKnown RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 C16orf45Q96MC5 204 aaPredicted RBP18.11■□□□□ 0.49
LYSMD4-211ENST00000604213 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 DRC7Q8IY82 874 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 DNAAF4Q8WXU2 420 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 CLSTN2Q9H4D0 955 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 DDX19AQ9NUU7 478 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 ADAMTS13Q76LX8 1427 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 EVI5LQ96CN4 794 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 SCAND2PQ9GZW5 306 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms