RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 TUBB4BP68371 445 aa24.35■■□□□ 1.49
SH3D19-211ENST00000604030 IFIT5Q13325 482 aaKnown RBP24.35■■□□□ 1.49
SH3D19-211ENST00000604030 CEP135Q66GS9 1140 aa24.35■■□□□ 1.49
SH3D19-211ENST00000604030 MYD88Q99836 296 aa24.35■■□□□ 1.49
SH3D19-211ENST00000604030 DNAI2Q9GZS0 605 aa24.35■■□□□ 1.49
SH3D19-211ENST00000604030 SMC1AQ14683 1233 aaKnown RBP24.35■■□□□ 1.49
SH3D19-211ENST00000604030 CCDC12Q8WUD4 166 aaPredicted RBP24.35■■□□□ 1.49
SH3D19-211ENST00000604030 SLC5A1P13866 664 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 CCDC102BQ68D86 513 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 KLHL10Q6JEL2 608 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 DYDC1Q8WWB3 177 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 NEK1Q96PY6 1258 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 TAOK3Q9H2K8 898 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 LRRC27Q9C0I9 530 aa24.34■■□□□ 1.49
SH3D19-211ENST00000604030 SRRTQ9BXP5 876 aaKnown RBP24.33■■□□□ 1.49
SH3D19-211ENST00000604030 WASLO00401 505 aaPredicted RBP24.33■■□□□ 1.49
SH3D19-211ENST00000604030 FAM200AQ8TCP9 573 aa24.33■■□□□ 1.49
SH3D19-211ENST00000604030 TMX3Q96JJ7 454 aa24.33■■□□□ 1.49
SH3D19-211ENST00000604030 CCDC194A0A1B0GVG4 234 aa24.32■■□□□ 1.48
SH3D19-211ENST00000604030 GOLIM4O00461 696 aa24.32■■□□□ 1.48
SH3D19-211ENST00000604030 MIS18AQ9NYP9 233 aa24.32■■□□□ 1.48
SH3D19-211ENST00000604030 IARSP41252 1262 aaKnown RBP24.32■■□□□ 1.48
SH3D19-211ENST00000604030 PPP4R3BQ5MIZ7 849 aa24.32■■□□□ 1.48
SH3D19-211ENST00000604030 IFFO1Q0D2I5 559 aa24.32■■□□□ 1.48
SH3D19-211ENST00000604030 CATIPQ7Z7H3 387 aa24.32■■□□□ 1.48
SH3D19-211ENST00000604030 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
SH3D19-211ENST00000604030 CCDC8Q9H0W5 538 aaPredicted RBP24.31■■□□□ 1.48
SH3D19-211ENST00000604030 TRIM21P19474 475 aaKnown RBP24.31■■□□□ 1.48
SH3D19-211ENST00000604030 GOLGA6L10A0A0M3HER8 536 aa24.31■■□□□ 1.48
SH3D19-211ENST00000604030 IFIT3O14879 490 aaKnown RBP24.31■■□□□ 1.48
SH3D19-211ENST00000604030 KRT222Q8N1A0 295 aa24.31■■□□□ 1.48
SH3D19-211ENST00000604030 C14orf93Q9H972 538 aaKnown RBP24.31■■□□□ 1.48
SH3D19-211ENST00000604030 ABCF2Q9UG63 623 aa24.31■■□□□ 1.48
SH3D19-211ENST00000604030 F6X3S4 739 aa24.31■■□□□ 1.48
SH3D19-211ENST00000604030 CKAP4Q07065 602 aaKnown RBP24.3■■□□□ 1.48
SH3D19-211ENST00000604030 NESP48681 1621 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 SPAG1Q07617 926 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 NME9Q86XW9 330 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 KCNG4Q8TDN1 519 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 CTAGE1Q96RT6 745 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 RMND1Q9NWS8 449 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 MKNK2Q9HBH9 465 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 TRMT1Q9NXH9 659 aaKnown RBP24.3■■□□□ 1.48
SH3D19-211ENST00000604030 THOC2Q8NI27 1593 aaKnown RBP24.3■■□□□ 1.48
SH3D19-211ENST00000604030 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 USP16Q9Y5T5 823 aa24.3■■□□□ 1.48
SH3D19-211ENST00000604030 ZKSCAN5Q9Y2L8 839 aa24.29■■□□□ 1.48
SH3D19-211ENST00000604030 KIF5BP33176 963 aa24.29■■□□□ 1.48
SH3D19-211ENST00000604030 EMILIN1Q9Y6C2 1016 aa24.29■■□□□ 1.48
SH3D19-211ENST00000604030 MBIPQ9NS73 344 aa24.29■■□□□ 1.48
SH3D19-211ENST00000604030 ORC3Q9UBD5 711 aaPredicted RBP24.29■■□□□ 1.48
SH3D19-211ENST00000604030 USP5P45974 858 aa24.29■■□□□ 1.48
SH3D19-211ENST00000604030 NCOA7Q8NI08 942 aa24.29■■□□□ 1.48
SH3D19-211ENST00000604030 SLF2Q8IX21 1173 aa24.28■■□□□ 1.48
SH3D19-211ENST00000604030 ANKRD44Q8N8A2 993 aa24.28■■□□□ 1.48
SH3D19-211ENST00000604030 ANKRD18BA2A2Z9 1011 aa24.28■■□□□ 1.48
SH3D19-211ENST00000604030 DISP3Q9P2K9 1392 aa24.28■■□□□ 1.48
SH3D19-211ENST00000604030 TCP11L1Q9NUJ3 509 aa24.28■■□□□ 1.48
SH3D19-211ENST00000604030 ZFYP08048 801 aaPredicted RBP24.28■■□□□ 1.48
SH3D19-211ENST00000604030 IFI16Q16666 785 aaKnown RBP24.28■■□□□ 1.48
SH3D19-211ENST00000604030 SMC5Q8IY18 1101 aa24.28■■□□□ 1.48
SH3D19-211ENST00000604030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.28■■□□□ 1.48
SH3D19-211ENST00000604030 NOLC1Q14978 699 aaKnown RBP eCLIP24.28■■□□□ 1.48
SH3D19-211ENST00000604030 TEX13AQ9BXU3 409 aaPredicted RBP24.28■■□□□ 1.48
SH3D19-211ENST00000604030 MINDY4BA8MYZ0 360 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 CETN1Q12798 172 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 TMOD2Q9NZR1 351 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 ADGRF5Q8IZF2 1346 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 NLRP5P59047 1200 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 GIGYF2Q6Y7W6 1299 aaKnown RBP24.27■■□□□ 1.48
SH3D19-211ENST00000604030 SKAP1Q86WV1 359 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 PAF1Q8N7H5 531 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 CALML4Q96GE6 196 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 PARD3Q8TEW0 1356 aa24.27■■□□□ 1.48
SH3D19-211ENST00000604030 MTIF2P46199 727 aaKnown RBP24.27■■□□□ 1.48
SH3D19-211ENST00000604030 POLR3DP05423 398 aaPredicted RBP24.26■■□□□ 1.47
SH3D19-211ENST00000604030 CTR9Q6PD62 1173 aa24.26■■□□□ 1.47
SH3D19-211ENST00000604030 TFIP11Q9UBB9 837 aaKnown RBP24.26■■□□□ 1.47
SH3D19-211ENST00000604030 XRCC6P12956 609 aaKnown RBP eCLIP24.26■■□□□ 1.47
SH3D19-211ENST00000604030 HCLS1P14317 486 aaPredicted RBP24.26■■□□□ 1.47
SH3D19-211ENST00000604030 PUS7Q96PZ0 661 aaKnown RBP24.26■■□□□ 1.47
SH3D19-211ENST00000604030 GUCY1B3Q02153 619 aa24.26■■□□□ 1.47
SH3D19-211ENST00000604030 TMOD3Q9NYL9 352 aa24.26■■□□□ 1.47
SH3D19-211ENST00000604030 CCDC175P0C221 793 aa24.26■■□□□ 1.47
SH3D19-211ENST00000604030 TDRD12Q587J7 1177 aaKnown RBP24.26■■□□□ 1.47
SH3D19-211ENST00000604030 CCDC178Q5BJE1 867 aa24.26■■□□□ 1.47
SH3D19-211ENST00000604030 SDSP20132 328 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 PPP1R42Q7Z4L9 355 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 EHMT1Q9H9B1 1298 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 GDPD2Q9HCC8 539 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 DDX12PQ92771 950 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 POLR3AO14802 1390 aaPredicted RBP24.25■■□□□ 1.47
SH3D19-211ENST00000604030 POLR3GO15318 223 aaPredicted RBP24.25■■□□□ 1.47
SH3D19-211ENST00000604030 ZNF444Q8N0Y2 327 aaPredicted RBP24.25■■□□□ 1.47
SH3D19-211ENST00000604030 RHPN1Q8TCX5 695 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 RAPGEF3O95398 923 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 ESYT1Q9BSJ8 1104 aa24.25■■□□□ 1.47
SH3D19-211ENST00000604030 ADGRL1O94910 1474 aa24.24■■□□□ 1.47
SH3D19-211ENST00000604030 IVLP07476 585 aa24.24■■□□□ 1.47
SH3D19-211ENST00000604030 GNG11P61952 73 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms