RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 ARXQ96QS3 562 aa8.15□□□□□ -1.1
FOCAD-208ENST00000603648 ESYT1Q9BSJ8 1104 aa8.15□□□□□ -1.1
FOCAD-208ENST00000603648 GPC1P35052 558 aa8.14□□□□□ -1.11
FOCAD-208ENST00000603648 SLC27A3Q5K4L6 730 aa8.14□□□□□ -1.11
FOCAD-208ENST00000603648 ANKMY2Q8IV38 441 aa8.14□□□□□ -1.11
FOCAD-208ENST00000603648 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
FOCAD-208ENST00000603648 SLC4A9Q96Q91 983 aa8.14□□□□□ -1.11
FOCAD-208ENST00000603648 ZNF358Q9NW07 568 aa8.14□□□□□ -1.11
FOCAD-208ENST00000603648 M0R2N6 131 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 PAX4O43316 350 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 F11P03951 625 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 BMP4P12644 408 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 DPYDQ12882 1025 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.13□□□□□ -1.11
FOCAD-208ENST00000603648 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
FOCAD-208ENST00000603648 NOVA2Q9UNW9 492 aaKnown RBP8.13□□□□□ -1.11
FOCAD-208ENST00000603648 BACH1O14867 736 aa8.12□□□□□ -1.11
FOCAD-208ENST00000603648 EPXP11678 715 aa8.12□□□□□ -1.11
FOCAD-208ENST00000603648 SEC13P55735 322 aa8.12□□□□□ -1.11
FOCAD-208ENST00000603648 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
FOCAD-208ENST00000603648 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
FOCAD-208ENST00000603648 FHDC1Q9C0D6 1143 aaPredicted RBP8.12□□□□□ -1.11
FOCAD-208ENST00000603648 TIMMDC1Q9NPL8 285 aa8.12□□□□□ -1.11
FOCAD-208ENST00000603648 SFI1A8K8P3 1242 aa8.11□□□□□ -1.11
FOCAD-208ENST00000603648 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
FOCAD-208ENST00000603648 CENPCQ03188 943 aa8.11□□□□□ -1.11
FOCAD-208ENST00000603648 MTFR1Q15390 333 aa8.11□□□□□ -1.11
FOCAD-208ENST00000603648 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
FOCAD-208ENST00000603648 ACIN1Q9UKV3 1341 aaKnown RBP8.1□□□□□ -1.11
FOCAD-208ENST00000603648 SMTNP53814 917 aa8.1□□□□□ -1.11
FOCAD-208ENST00000603648 FAM200AQ8TCP9 573 aa8.1□□□□□ -1.11
FOCAD-208ENST00000603648 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
FOCAD-208ENST00000603648 KRTAP4-2Q9BYR5 136 aa8.1□□□□□ -1.11
FOCAD-208ENST00000603648 GRIP2Q9C0E4 1043 aa8.1□□□□□ -1.11
FOCAD-208ENST00000603648 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
FOCAD-208ENST00000603648 C2CD2LO14523 706 aa8.09□□□□□ -1.11
FOCAD-208ENST00000603648 THBS1P07996 1170 aa8.09□□□□□ -1.11
FOCAD-208ENST00000603648 EPHA4P54764 986 aa8.09□□□□□ -1.11
FOCAD-208ENST00000603648 TLR1Q15399 786 aa8.09□□□□□ -1.11
FOCAD-208ENST00000603648 PLVAPQ9BX97 442 aa8.09□□□□□ -1.11
FOCAD-208ENST00000603648 A6NJY4 79 aa8.08□□□□□ -1.12
FOCAD-208ENST00000603648 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
FOCAD-208ENST00000603648 GPAMQ9HCL2 828 aa8.08□□□□□ -1.12
FOCAD-208ENST00000603648 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
FOCAD-208ENST00000603648 SWI5Q1ZZU3 235 aa8.07□□□□□ -1.12
FOCAD-208ENST00000603648 CHSY3Q70JA7 882 aa8.07□□□□□ -1.12
FOCAD-208ENST00000603648 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
FOCAD-208ENST00000603648 ZSCAN10Q96SZ4 725 aaPredicted RBP8.07□□□□□ -1.12
FOCAD-208ENST00000603648 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
FOCAD-208ENST00000603648 IQSEC3Q9UPP2 1182 aaPredicted RBP8.07□□□□□ -1.12
FOCAD-208ENST00000603648 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
FOCAD-208ENST00000603648 CDK2AP1O14519 115 aa8.06□□□□□ -1.12
FOCAD-208ENST00000603648 APBA3O96018 575 aa8.06□□□□□ -1.12
FOCAD-208ENST00000603648 FZD5Q13467 585 aa8.06□□□□□ -1.12
FOCAD-208ENST00000603648 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
FOCAD-208ENST00000603648 TNS4Q8IZW8 715 aa8.06□□□□□ -1.12
FOCAD-208ENST00000603648 TRIM11Q96F44 468 aa8.06□□□□□ -1.12
FOCAD-208ENST00000603648 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
FOCAD-208ENST00000603648 NEURL1BA8MQ27 555 aa8.05□□□□□ -1.12
FOCAD-208ENST00000603648 CSB-PGBD3P0DP91 1061 aa8.05□□□□□ -1.12
FOCAD-208ENST00000603648 WDR44Q5JSH3 913 aa8.05□□□□□ -1.12
FOCAD-208ENST00000603648 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
FOCAD-208ENST00000603648 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
FOCAD-208ENST00000603648 TAS1R3Q7RTX0 852 aa8.04□□□□□ -1.12
FOCAD-208ENST00000603648 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
FOCAD-208ENST00000603648 ATXN7L1Q9ULK2 861 aaPredicted RBP8.04□□□□□ -1.12
FOCAD-208ENST00000603648 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
FOCAD-208ENST00000603648 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
FOCAD-208ENST00000603648 FGFR3P22607 806 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
FOCAD-208ENST00000603648 CTBSQ01459 385 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 SLC9A9Q8IVB4 645 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 RETREG2Q8NC44 543 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 CLP1Q92989 425 aaKnown RBP8.03□□□□□ -1.12
FOCAD-208ENST00000603648 ABHD17AQ96GS6 310 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 HINFPQ9BQA5 517 aa8.03□□□□□ -1.12
FOCAD-208ENST00000603648 TSPAN10Q9H1Z9 355 aaPredicted RBP8.03□□□□□ -1.12
FOCAD-208ENST00000603648 ARAFP10398 606 aa8.02□□□□□ -1.13
FOCAD-208ENST00000603648 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.13
FOCAD-208ENST00000603648 COL17A1Q9UMD9 1497 aaPredicted RBP8.01□□□□□ -1.13
FOCAD-208ENST00000603648 C21orf2O43822 256 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 IGFBP4P22692 258 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 WEE1P30291 646 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 C4orf17Q53FE4 359 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 GAS2L2Q8NHY3 880 aa8.01□□□□□ -1.13
FOCAD-208ENST00000603648 NIFKQ9BYG3 293 aaKnown RBP8.01□□□□□ -1.13
FOCAD-208ENST00000603648 ATAD2Q6PL18 1390 aa8□□□□□ -1.13
FOCAD-208ENST00000603648 PSMA6P60900 246 aaKnown RBP8□□□□□ -1.13
FOCAD-208ENST00000603648 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
FOCAD-208ENST00000603648 TEAD4Q15561 434 aa8□□□□□ -1.13
FOCAD-208ENST00000603648 OCLNQ16625 522 aa8□□□□□ -1.13
FOCAD-208ENST00000603648 TBCELQ5QJ74 424 aa8□□□□□ -1.13
FOCAD-208ENST00000603648 STAG2Q8N3U4 1231 aa8□□□□□ -1.13
FOCAD-208ENST00000603648 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
FOCAD-208ENST00000603648 SLAIN2Q9P270 581 aa8□□□□□ -1.13
FOCAD-208ENST00000603648 LGR5O75473 907 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms