RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 BRCA1P38398 1863 aaKnown RBP28.51■■■□□ 2.15
PPFIA3-208ENST00000602726 HLFQ16534 295 aa28.5■■■□□ 2.15
PPFIA3-208ENST00000602726 KRT24Q2M2I5 525 aa28.5■■■□□ 2.15
PPFIA3-208ENST00000602726 C2CD5Q86YS7 1000 aa28.5■■■□□ 2.15
PPFIA3-208ENST00000602726 CCDC24Q8N4L8 307 aa28.5■■■□□ 2.15
PPFIA3-208ENST00000602726 BRIP1Q9BX63 1249 aa28.5■■■□□ 2.15
PPFIA3-208ENST00000602726 NIP7Q9Y221 180 aaKnown RBP eCLIP28.5■■■□□ 2.15
PPFIA3-208ENST00000602726 MAP3K15Q6ZN16 1313 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 ERVV-1B6SEH8 477 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 H0YIN7 160 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 ST5P78524 1137 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 TTLL7Q6ZT98 887 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 NBPF5PQ86XG9 351 aaPredicted RBP28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 NECTIN2Q92692 538 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 IFT57Q9NWB7 429 aa28.49■■■□□ 2.15
PPFIA3-208ENST00000602726 PDE6BP35913 854 aa28.48■■■□□ 2.15
PPFIA3-208ENST00000602726 ARHGAP27Q6ZUM4 889 aa28.48■■■□□ 2.15
PPFIA3-208ENST00000602726 MBIPQ9NS73 344 aa28.48■■■□□ 2.15
PPFIA3-208ENST00000602726 ZNF853P0CG23 659 aa28.47■■■□□ 2.15
PPFIA3-208ENST00000602726 GNAI1P63096 354 aa28.47■■■□□ 2.15
PPFIA3-208ENST00000602726 PDIA6Q15084 440 aa28.47■■■□□ 2.15
PPFIA3-208ENST00000602726 ZBTB3Q9H5J0 574 aa28.46■■■□□ 2.15
PPFIA3-208ENST00000602726 PDZRN3Q9UPQ7 1066 aa28.46■■■□□ 2.15
PPFIA3-208ENST00000602726 TPTE2Q6XPS3 522 aa28.45■■■□□ 2.14
PPFIA3-208ENST00000602726 SENP3-EIF4A1A0A087X0R7 540 aa28.44■■■□□ 2.14
PPFIA3-208ENST00000602726 FAM177BA6PVY3 158 aa28.44■■■□□ 2.14
PPFIA3-208ENST00000602726 ANXA1P04083 346 aa28.44■■■□□ 2.14
PPFIA3-208ENST00000602726 HOXB7P09629 217 aa28.44■■■□□ 2.14
PPFIA3-208ENST00000602726 PROSER3Q2NL68 480 aa28.44■■■□□ 2.14
PPFIA3-208ENST00000602726 ARFGEF1Q9Y6D6 1849 aa28.43■■■□□ 2.14
PPFIA3-208ENST00000602726 HDGFL1Q5TGJ6 251 aa28.43■■■□□ 2.14
PPFIA3-208ENST00000602726 LRP10Q7Z4F1 713 aa28.43■■■□□ 2.14
PPFIA3-208ENST00000602726 TTLL6Q8N841 843 aa28.43■■■□□ 2.14
PPFIA3-208ENST00000602726 ANKRD31Q8N7Z5 1873 aa28.42■■■□□ 2.14
PPFIA3-208ENST00000602726 CCDC27Q2M243 656 aa28.42■■■□□ 2.14
PPFIA3-208ENST00000602726 DUSP27Q5VZP5 1158 aa28.42■■■□□ 2.14
PPFIA3-208ENST00000602726 ZNF622Q969S3 477 aaKnown RBP eCLIP28.42■■■□□ 2.14
PPFIA3-208ENST00000602726 DDX21Q9NR30 783 aaKnown RBP eCLIP28.42■■■□□ 2.14
PPFIA3-208ENST00000602726 NUP98P52948 1817 aa28.41■■■□□ 2.14
PPFIA3-208ENST00000602726 DLEC1Q9Y238 1755 aa28.4■■■□□ 2.14
PPFIA3-208ENST00000602726 GTF2E1P29083 439 aaPredicted RBP28.4■■■□□ 2.14
PPFIA3-208ENST00000602726 GIGYF2Q6Y7W6 1299 aaKnown RBP28.4■■■□□ 2.14
PPFIA3-208ENST00000602726 ATP10DQ9P241 1426 aa28.4■■■□□ 2.14
PPFIA3-208ENST00000602726 GPTP24298 496 aa28.39■■■□□ 2.14
PPFIA3-208ENST00000602726 AIMP1Q12904 312 aaKnown RBP28.39■■■□□ 2.14
PPFIA3-208ENST00000602726 COPS6Q7L5N1 327 aa28.39■■■□□ 2.14
PPFIA3-208ENST00000602726 CHPF2Q9P2E5 772 aa28.39■■■□□ 2.14
PPFIA3-208ENST00000602726 WWC1Q8IX03 1113 aa28.38■■■□□ 2.13
PPFIA3-208ENST00000602726 FAM9BQ8IZU0 186 aa28.38■■■□□ 2.13
PPFIA3-208ENST00000602726 XAGE3Q8WTP9 111 aa28.38■■■□□ 2.13
PPFIA3-208ENST00000602726 NYXQ9GZU5 481 aa28.38■■■□□ 2.13
PPFIA3-208ENST00000602726 NCBP3Q53F19 620 aaKnown RBP28.37■■■□□ 2.13
PPFIA3-208ENST00000602726 DBF4Q9UBU7 674 aaPredicted RBP28.37■■■□□ 2.13
PPFIA3-208ENST00000602726 ELL2O00472 640 aaPredicted RBP28.35■■■□□ 2.13
PPFIA3-208ENST00000602726 SRGNP10124 158 aa28.35■■■□□ 2.13
PPFIA3-208ENST00000602726 STYK1Q6J9G0 422 aa28.35■■■□□ 2.13
PPFIA3-208ENST00000602726 ZNF34Q8IZ26 560 aa28.35■■■□□ 2.13
PPFIA3-208ENST00000602726 ADCY9O60503 1353 aa28.35■■■□□ 2.13
PPFIA3-208ENST00000602726 CNKSR1Q969H4 720 aa28.34■■■□□ 2.13
PPFIA3-208ENST00000602726 MASTLQ96GX5 879 aa28.34■■■□□ 2.13
PPFIA3-208ENST00000602726 COL11A2P13942 1736 aaPredicted RBP28.33■■■□□ 2.13
PPFIA3-208ENST00000602726 HYPKQ9NX55 129 aa28.33■■■□□ 2.13
PPFIA3-208ENST00000602726 SALL2Q9Y467 1007 aaPredicted RBP28.33■■■□□ 2.13
PPFIA3-208ENST00000602726 UBN2Q6ZU65 1347 aa28.33■■■□□ 2.13
PPFIA3-208ENST00000602726 PARP10Q53GL7 1025 aa28.32■■■□□ 2.12
PPFIA3-208ENST00000602726 HSP90AB3PQ58FF7 597 aa28.32■■■□□ 2.12
PPFIA3-208ENST00000602726 SUSD4Q5VX71 490 aa28.32■■■□□ 2.12
PPFIA3-208ENST00000602726 NUTM1Q86Y26 1132 aa28.32■■■□□ 2.12
PPFIA3-208ENST00000602726 C8orf58Q8NAV2 365 aa28.32■■■□□ 2.12
PPFIA3-208ENST00000602726 C9orf131Q5VYM1 1079 aa28.31■■■□□ 2.12
PPFIA3-208ENST00000602726 PPP1R42Q7Z4L9 355 aa28.31■■■□□ 2.12
PPFIA3-208ENST00000602726 TSR2Q969E8 191 aaKnown RBP28.31■■■□□ 2.12
PPFIA3-208ENST00000602726 IBTKQ9P2D0 1353 aaPredicted RBP28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 IL16Q14005 1332 aa28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 KLRG2A4D1S0 409 aaPredicted RBP28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 NPR1P16066 1061 aa28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 ERFEQ4G0M1 354 aa28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 CHMP4AQ9BY43 222 aa28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 ZNF219Q9P2Y4 722 aaPredicted RBP28.3■■■□□ 2.12
PPFIA3-208ENST00000602726 ZNF526Q8TF50 670 aaPredicted RBP28.29■■■□□ 2.12
PPFIA3-208ENST00000602726 C21orf2O43822 256 aa28.28■■■□□ 2.12
PPFIA3-208ENST00000602726 PRPF40BQ6NWY9 871 aaKnown RBP28.28■■■□□ 2.12
PPFIA3-208ENST00000602726 GPBP1L1Q9HC44 474 aaPredicted RBP28.28■■■□□ 2.12
PPFIA3-208ENST00000602726 ABCC12Q96J65 1359 aa28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 NTSR2O95665 410 aa28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 TCIRG1Q13488 830 aa28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 ANKRD13DQ6ZTN6 518 aa28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 PLBD2Q8NHP8 589 aa28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 UTP14AQ9BVJ6 771 aaKnown RBP28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 RNF181Q9P0P0 153 aa28.27■■■□□ 2.12
PPFIA3-208ENST00000602726 RASSF7Q02833 373 aa28.26■■■□□ 2.11
PPFIA3-208ENST00000602726 WDR63Q8IWG1 891 aa28.26■■■□□ 2.11
PPFIA3-208ENST00000602726 CCDC30Q5VVM6 783 aa28.25■■■□□ 2.11
PPFIA3-208ENST00000602726 TSPYL6Q8N831 410 aa28.25■■■□□ 2.11
PPFIA3-208ENST00000602726 NLRP10Q86W26 655 aa28.24■■■□□ 2.11
PPFIA3-208ENST00000602726 SLX4Q8IY92 1834 aa28.23■■■□□ 2.11
PPFIA3-208ENST00000602726 LMNB1P20700 586 aa28.22■■■□□ 2.11
PPFIA3-208ENST00000602726 ALDH1B1P30837 517 aa28.22■■■□□ 2.11
PPFIA3-208ENST00000602726 GOLGA2Q08379 1002 aa28.22■■■□□ 2.11
PPFIA3-208ENST00000602726 CACNA1SQ13698 1873 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms