RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 ZNF622Q969S3 477 aaKnown RBP eCLIP34.45■■■■□ 3.11
PPFIA3-205ENST00000602509 C9orf131Q5VYM1 1079 aa34.44■■■■□ 3.1
PPFIA3-205ENST00000602509 NIP7Q9Y221 180 aaKnown RBP eCLIP34.44■■■■□ 3.1
PPFIA3-205ENST00000602509 MYL6BP14649 208 aa34.43■■■■□ 3.1
PPFIA3-205ENST00000602509 ARFGEF1Q9Y6D6 1849 aa34.41■■■■□ 3.1
PPFIA3-205ENST00000602509 KIF6Q6ZMV9 814 aa34.41■■■■□ 3.1
PPFIA3-205ENST00000602509 LAMB4A4D0S4 1761 aa34.41■■■■□ 3.1
PPFIA3-205ENST00000602509 BCORQ6W2J9 1755 aa34.41■■■■□ 3.1
PPFIA3-205ENST00000602509 HLFQ16534 295 aa34.4■■■■□ 3.1
PPFIA3-205ENST00000602509 ERBB4Q15303 1308 aa34.39■■■■□ 3.1
PPFIA3-205ENST00000602509 TPTE2Q6XPS3 522 aa34.39■■■■□ 3.1
PPFIA3-205ENST00000602509 TRIM35Q9UPQ4 493 aa34.39■■■■□ 3.1
PPFIA3-205ENST00000602509 LAS1LQ9Y4W2 734 aaKnown RBP34.39■■■■□ 3.1
PPFIA3-205ENST00000602509 ERVV-1B6SEH8 477 aa34.38■■■■□ 3.09
PPFIA3-205ENST00000602509 EIF2S2P20042 333 aaKnown RBP34.38■■■■□ 3.09
PPFIA3-205ENST00000602509 RNF181Q9P0P0 153 aa34.38■■■■□ 3.09
PPFIA3-205ENST00000602509 MAP3K15Q6ZN16 1313 aa34.37■■■■□ 3.09
PPFIA3-205ENST00000602509 FAM177BA6PVY3 158 aa34.36■■■■□ 3.09
PPFIA3-205ENST00000602509 TTLL7Q6ZT98 887 aa34.35■■■■□ 3.09
PPFIA3-205ENST00000602509 CHL1O00533 1208 aa34.34■■■■□ 3.09
PPFIA3-205ENST00000602509 GTF2E1P29083 439 aaPredicted RBP34.34■■■■□ 3.09
PPFIA3-205ENST00000602509 CNKSR1Q969H4 720 aa34.34■■■■□ 3.09
PPFIA3-205ENST00000602509 SENP3-EIF4A1A0A087X0R7 540 aa34.33■■■■□ 3.09
PPFIA3-205ENST00000602509 SRGNP10124 158 aa34.33■■■■□ 3.09
PPFIA3-205ENST00000602509 RASSF7Q02833 373 aa34.33■■■■□ 3.09
PPFIA3-205ENST00000602509 STYK1Q6J9G0 422 aa34.33■■■■□ 3.09
PPFIA3-205ENST00000602509 ZBTB3Q9H5J0 574 aa34.33■■■■□ 3.09
PPFIA3-205ENST00000602509 ZNF316A6NFI3 1004 aaPredicted RBP34.32■■■■□ 3.08
PPFIA3-205ENST00000602509 MASTLQ96GX5 879 aa34.32■■■■□ 3.08
PPFIA3-205ENST00000602509 ZNF219Q9P2Y4 722 aaPredicted RBP34.32■■■■□ 3.08
PPFIA3-205ENST00000602509 DLEC1Q9Y238 1755 aa34.31■■■■□ 3.08
PPFIA3-205ENST00000602509 C21orf2O43822 256 aa34.3■■■■□ 3.08
PPFIA3-205ENST00000602509 LMNB1P20700 586 aa34.3■■■■□ 3.08
PPFIA3-205ENST00000602509 NYXQ9GZU5 481 aa34.3■■■■□ 3.08
PPFIA3-205ENST00000602509 ANKRD31Q8N7Z5 1873 aa34.3■■■■□ 3.08
PPFIA3-205ENST00000602509 APAF1O14727 1248 aa34.28■■■■□ 3.08
PPFIA3-205ENST00000602509 NECTIN2Q92692 538 aa34.28■■■■□ 3.08
PPFIA3-205ENST00000602509 PDIA6Q15084 440 aa34.27■■■■□ 3.08
PPFIA3-205ENST00000602509 KIF3CO14782 793 aa34.26■■■■□ 3.08
PPFIA3-205ENST00000602509 NPR1P16066 1061 aa34.26■■■■□ 3.08
PPFIA3-205ENST00000602509 GPTP24298 496 aa34.26■■■■□ 3.08
PPFIA3-205ENST00000602509 PRPF40BQ6NWY9 871 aaKnown RBP34.26■■■■□ 3.08
PPFIA3-205ENST00000602509 KRT24Q2M2I5 525 aa34.25■■■■□ 3.07
PPFIA3-205ENST00000602509 GIGYF2Q6Y7W6 1299 aaKnown RBP34.25■■■■□ 3.07
PPFIA3-205ENST00000602509 CFAP44Q96MT7 982 aa34.25■■■■□ 3.07
PPFIA3-205ENST00000602509 NFKBIEO00221 500 aa34.24■■■■□ 3.07
PPFIA3-205ENST00000602509 ANXA1P04083 346 aa34.24■■■■□ 3.07
PPFIA3-205ENST00000602509 PROSER3Q2NL68 480 aa34.24■■■■□ 3.07
PPFIA3-205ENST00000602509 KDM2BQ8NHM5 1336 aa34.24■■■■□ 3.07
PPFIA3-205ENST00000602509 KLRG2A4D1S0 409 aaPredicted RBP34.23■■■■□ 3.07
PPFIA3-205ENST00000602509 CALD1Q05682 793 aaKnown RBP34.23■■■■□ 3.07
PPFIA3-205ENST00000602509 SOGA3Q5TF21 947 aa34.23■■■■□ 3.07
PPFIA3-205ENST00000602509 LRP10Q7Z4F1 713 aa34.23■■■■□ 3.07
PPFIA3-205ENST00000602509 COL11A2P13942 1736 aaPredicted RBP34.23■■■■□ 3.07
PPFIA3-205ENST00000602509 NMRK2Q9NPI5 230 aa34.22■■■■□ 3.07
PPFIA3-205ENST00000602509 ZC3H4Q9UPT8 1303 aaKnown RBP34.22■■■■□ 3.07
PPFIA3-205ENST00000602509 NUTM1Q86Y26 1132 aa34.21■■■■□ 3.07
PPFIA3-205ENST00000602509 ANP32CO43423 234 aa34.2■■■■□ 3.07
PPFIA3-205ENST00000602509 AIMP1Q12904 312 aaKnown RBP34.2■■■■□ 3.07
PPFIA3-205ENST00000602509 ZNF34Q8IZ26 560 aa34.2■■■■□ 3.07
PPFIA3-205ENST00000602509 DDX21Q9NR30 783 aaKnown RBP eCLIP34.2■■■■□ 3.07
PPFIA3-205ENST00000602509 UBN2Q6ZU65 1347 aa34.2■■■■□ 3.07
PPFIA3-205ENST00000602509 HOXB7P09629 217 aa34.19■■■■□ 3.06
PPFIA3-205ENST00000602509 PRELPP51888 382 aa34.19■■■■□ 3.06
PPFIA3-205ENST00000602509 ERFEQ4G0M1 354 aa34.19■■■■□ 3.06
PPFIA3-205ENST00000602509 HDGFL1Q5TGJ6 251 aa34.19■■■■□ 3.06
PPFIA3-205ENST00000602509 COPS6Q7L5N1 327 aa34.19■■■■□ 3.06
PPFIA3-205ENST00000602509 CCDC184Q52MB2 194 aa34.18■■■■□ 3.06
PPFIA3-205ENST00000602509 SUSD4Q5VX71 490 aa34.18■■■■□ 3.06
PPFIA3-205ENST00000602509 PPP1R42Q7Z4L9 355 aa34.18■■■■□ 3.06
PPFIA3-205ENST00000602509 XAGE3Q8WTP9 111 aa34.18■■■■□ 3.06
PPFIA3-205ENST00000602509 MBIPQ9NS73 344 aa34.18■■■■□ 3.06
PPFIA3-205ENST00000602509 PARP10Q53GL7 1025 aa34.17■■■■□ 3.06
PPFIA3-205ENST00000602509 TAOK3Q9H2K8 898 aa34.17■■■■□ 3.06
PPFIA3-205ENST00000602509 IBTKQ9P2D0 1353 aaPredicted RBP34.17■■■■□ 3.06
PPFIA3-205ENST00000602509 ALDH1B1P30837 517 aa34.16■■■■□ 3.06
PPFIA3-205ENST00000602509 GNAI1P63096 354 aa34.16■■■■□ 3.06
PPFIA3-205ENST00000602509 C16orf71Q8IYS4 520 aaPredicted RBP34.16■■■■□ 3.06
PPFIA3-205ENST00000602509 IFT57Q9NWB7 429 aa34.16■■■■□ 3.06
PPFIA3-205ENST00000602509 ABCC12Q96J65 1359 aa34.15■■■■□ 3.06
PPFIA3-205ENST00000602509 CHPF2Q9P2E5 772 aa34.15■■■■□ 3.06
PPFIA3-205ENST00000602509 LTBP3Q9NS15 1303 aa34.14■■■■□ 3.06
PPFIA3-205ENST00000602509 TOMM70O94826 608 aa34.14■■■■□ 3.06
PPFIA3-205ENST00000602509 ZNF853P0CG23 659 aa34.14■■■■□ 3.06
PPFIA3-205ENST00000602509 HSP90AB3PQ58FF7 597 aa34.14■■■■□ 3.06
PPFIA3-205ENST00000602509 DUSP27Q5VZP5 1158 aa34.14■■■■□ 3.06
PPFIA3-205ENST00000602509 NTSR2O95665 410 aa34.13■■■■□ 3.05
PPFIA3-205ENST00000602509 CCDC93Q567U6 631 aa34.13■■■■□ 3.05
PPFIA3-205ENST00000602509 DBF4Q9UBU7 674 aaPredicted RBP34.13■■■■□ 3.05
PPFIA3-205ENST00000602509 SBF1O95248 1867 aa34.13■■■■□ 3.05
PPFIA3-205ENST00000602509 NUP98P52948 1817 aa34.13■■■■□ 3.05
PPFIA3-205ENST00000602509 CRY2Q49AN0 593 aa34.12■■■■□ 3.05
PPFIA3-205ENST00000602509 C7orf43Q8WVR3 580 aa34.12■■■■□ 3.05
PPFIA3-205ENST00000602509 RPGRQ92834 1020 aaKnown RBP34.12■■■■□ 3.05
PPFIA3-205ENST00000602509 UTP14AQ9BVJ6 771 aaKnown RBP34.12■■■■□ 3.05
PPFIA3-205ENST00000602509 RRAGCQ9HB90 399 aa34.12■■■■□ 3.05
PPFIA3-205ENST00000602509 MRS2Q9HD23 443 aa34.12■■■■□ 3.05
PPFIA3-205ENST00000602509 SLX4Q8IY92 1834 aa34.11■■■■□ 3.05
PPFIA3-205ENST00000602509 GLTPD2A6NH11 291 aa34.1■■■■□ 3.05
PPFIA3-205ENST00000602509 CEP350Q5VT06 3117 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms