RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 HOXB7P09629 217 aa18.56■□□□□ 0.56
USE1-210ENST00000601662 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
USE1-210ENST00000601662 SERPINB2P05120 415 aa18.55■□□□□ 0.56
USE1-210ENST00000601662 TWISTNBQ3B726 338 aaPredicted RBP18.55■□□□□ 0.56
USE1-210ENST00000601662 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
USE1-210ENST00000601662 VAMP4O75379 141 aa18.54■□□□□ 0.56
USE1-210ENST00000601662 ANXA1P04083 346 aa18.54■□□□□ 0.56
USE1-210ENST00000601662 SETDB2Q96T68 719 aa18.53■□□□□ 0.56
USE1-210ENST00000601662 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
USE1-210ENST00000601662 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
USE1-210ENST00000601662 NPHP1O15259 732 aa18.52■□□□□ 0.56
USE1-210ENST00000601662 DPEP1P16444 411 aa18.52■□□□□ 0.56
USE1-210ENST00000601662 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.56
USE1-210ENST00000601662 TTLL7Q6ZT98 887 aa18.52■□□□□ 0.56
USE1-210ENST00000601662 CCDC24Q8N4L8 307 aa18.52■□□□□ 0.56
USE1-210ENST00000601662 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
USE1-210ENST00000601662 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
USE1-210ENST00000601662 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
USE1-210ENST00000601662 TGFB2P61812 414 aa18.51■□□□□ 0.55
USE1-210ENST00000601662 HLFQ16534 295 aa18.51■□□□□ 0.55
USE1-210ENST00000601662 PROSER3Q2NL68 480 aa18.51■□□□□ 0.55
USE1-210ENST00000601662 TSPYL6Q8N831 410 aa18.51■□□□□ 0.55
USE1-210ENST00000601662 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
USE1-210ENST00000601662 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
USE1-210ENST00000601662 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
USE1-210ENST00000601662 KIF6Q6ZMV9 814 aa18.5■□□□□ 0.55
USE1-210ENST00000601662 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
USE1-210ENST00000601662 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
USE1-210ENST00000601662 CHRNA5P30532 468 aa18.49■□□□□ 0.55
USE1-210ENST00000601662 AIMP1Q12904 312 aaKnown RBP18.49■□□□□ 0.55
USE1-210ENST00000601662 PDIA6Q15084 440 aa18.49■□□□□ 0.55
USE1-210ENST00000601662 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
USE1-210ENST00000601662 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
USE1-210ENST00000601662 RARSP54136 660 aaKnown RBP18.48■□□□□ 0.55
USE1-210ENST00000601662 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
USE1-210ENST00000601662 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
USE1-210ENST00000601662 MAP3K15Q6ZN16 1313 aa18.48■□□□□ 0.55
USE1-210ENST00000601662 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
USE1-210ENST00000601662 GRIN3BO60391 1043 aa18.47■□□□□ 0.55
USE1-210ENST00000601662 YY1P25490 414 aa18.47■□□□□ 0.55
USE1-210ENST00000601662 NBPF5PQ86XG9 351 aaPredicted RBP18.47■□□□□ 0.55
USE1-210ENST00000601662 CHPF2Q9P2E5 772 aa18.47■□□□□ 0.55
USE1-210ENST00000601662 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
USE1-210ENST00000601662 SCN7AQ01118 1682 aa18.47■□□□□ 0.55
USE1-210ENST00000601662 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
USE1-210ENST00000601662 PRR5LQ6MZQ0 368 aa18.46■□□□□ 0.55
USE1-210ENST00000601662 COPS6Q7L5N1 327 aa18.46■□□□□ 0.55
USE1-210ENST00000601662 CNBD1Q8NA66 436 aa18.46■□□□□ 0.55
USE1-210ENST00000601662 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
USE1-210ENST00000601662 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
USE1-210ENST00000601662 DDX21Q9NR30 783 aaKnown RBP eCLIP18.46■□□□□ 0.55
USE1-210ENST00000601662 AFDNP55196 1824 aaKnown RBP18.46■□□□□ 0.55
USE1-210ENST00000601662 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
USE1-210ENST00000601662 GPTP24298 496 aa18.45■□□□□ 0.54
USE1-210ENST00000601662 BRPF1P55201 1214 aaPredicted RBP18.45■□□□□ 0.54
USE1-210ENST00000601662 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.45■□□□□ 0.54
USE1-210ENST00000601662 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
USE1-210ENST00000601662 KCNA3P22001 575 aa18.44■□□□□ 0.54
USE1-210ENST00000601662 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
USE1-210ENST00000601662 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
USE1-210ENST00000601662 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
USE1-210ENST00000601662 SMC4Q9NTJ3 1288 aa18.44■□□□□ 0.54
USE1-210ENST00000601662 GOLGB1Q14789 3259 aaKnown RBP18.44■□□□□ 0.54
USE1-210ENST00000601662 BCORQ6W2J9 1755 aa18.43■□□□□ 0.54
USE1-210ENST00000601662 UTRNP46939 3433 aa18.43■□□□□ 0.54
USE1-210ENST00000601662 GTF2E1P29083 439 aaPredicted RBP18.43■□□□□ 0.54
USE1-210ENST00000601662 ST5P78524 1137 aa18.43■□□□□ 0.54
USE1-210ENST00000601662 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
USE1-210ENST00000601662 KIF13BQ9NQT8 1826 aa18.43■□□□□ 0.54
USE1-210ENST00000601662 H0YIN7 160 aa18.42■□□□□ 0.54
USE1-210ENST00000601662 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
USE1-210ENST00000601662 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
USE1-210ENST00000601662 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
USE1-210ENST00000601662 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
USE1-210ENST00000601662 RGL2O15211 777 aa18.41■□□□□ 0.54
USE1-210ENST00000601662 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
USE1-210ENST00000601662 PDE6BP35913 854 aa18.41■□□□□ 0.54
USE1-210ENST00000601662 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
USE1-210ENST00000601662 MRPL50Q8N5N7 158 aaKnown RBP18.41■□□□□ 0.54
USE1-210ENST00000601662 BRIP1Q9BX63 1249 aa18.41■□□□□ 0.54
USE1-210ENST00000601662 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
USE1-210ENST00000601662 BCAR3O75815 825 aa18.4■□□□□ 0.54
USE1-210ENST00000601662 ARHGAP27Q6ZUM4 889 aa18.4■□□□□ 0.54
USE1-210ENST00000601662 ZNF622Q969S3 477 aaKnown RBP eCLIP18.4■□□□□ 0.54
USE1-210ENST00000601662 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
USE1-210ENST00000601662 KIF16BQ96L93 1317 aa18.4■□□□□ 0.54
USE1-210ENST00000601662 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
USE1-210ENST00000601662 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
USE1-210ENST00000601662 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
USE1-210ENST00000601662 NUTM1Q86Y26 1132 aa18.39■□□□□ 0.53
USE1-210ENST00000601662 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
USE1-210ENST00000601662 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
USE1-210ENST00000601662 NUP98P52948 1817 aa18.38■□□□□ 0.53
USE1-210ENST00000601662 MS4A1P11836 297 aa18.38■□□□□ 0.53
USE1-210ENST00000601662 ANKRD13DQ6ZTN6 518 aa18.38■□□□□ 0.53
USE1-210ENST00000601662 ZNF34Q8IZ26 560 aa18.38■□□□□ 0.53
USE1-210ENST00000601662 PHAXQ9H814 394 aaKnown RBP18.38■□□□□ 0.53
USE1-210ENST00000601662 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
USE1-210ENST00000601662 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
USE1-210ENST00000601662 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms