RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 NBPF5PQ86XG9 351 aaPredicted RBP27.6■■■□□ 2.01
SNRPA-211ENST00000601545 TTLL7Q6ZT98 887 aa27.58■■■□□ 2.01
SNRPA-211ENST00000601545 NRXN2Q9P2S2 1712 aa27.58■■■□□ 2.01
SNRPA-211ENST00000601545 KDM3BQ7LBC6 1761 aa27.58■■■□□ 2
SNRPA-211ENST00000601545 CHL1O00533 1208 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 APAF1O14727 1248 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 C1QTNF8P60827 252 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 CCDC184Q52MB2 194 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 C9orf131Q5VYM1 1079 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 KIF6Q6ZMV9 814 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 NECTIN2Q92692 538 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 ADCY9O60503 1353 aa27.57■■■□□ 2
SNRPA-211ENST00000601545 SCN7AQ01118 1682 aa27.56■■■□□ 2
SNRPA-211ENST00000601545 TPTE2Q6XPS3 522 aa27.56■■■□□ 2
SNRPA-211ENST00000601545 PDZRN3Q9UPQ7 1066 aa27.56■■■□□ 2
SNRPA-211ENST00000601545 ERVV-1B6SEH8 477 aa27.54■■■□□ 2
SNRPA-211ENST00000601545 RGL2O15211 777 aa27.54■■■□□ 2
SNRPA-211ENST00000601545 ZBTB3Q9H5J0 574 aa27.54■■■□□ 2
SNRPA-211ENST00000601545 ZNF219Q9P2Y4 722 aaPredicted RBP27.54■■■□□ 2
SNRPA-211ENST00000601545 MAP3K15Q6ZN16 1313 aa27.53■■■□□ 2
SNRPA-211ENST00000601545 ANXA1P04083 346 aa27.53■■■□□ 2
SNRPA-211ENST00000601545 KRT24Q2M2I5 525 aa27.53■■■□□ 2
SNRPA-211ENST00000601545 BRCA1P38398 1863 aaKnown RBP27.53■■■□□ 2
SNRPA-211ENST00000601545 ERBB4Q15303 1308 aa27.52■■■□□ 2
SNRPA-211ENST00000601545 GTF2E1P29083 439 aaPredicted RBP27.52■■■□□ 2
SNRPA-211ENST00000601545 RNF181Q9P0P0 153 aa27.52■■■□□ 2
SNRPA-211ENST00000601545 PDIA6Q15084 440 aa27.51■■□□□ 1.99
SNRPA-211ENST00000601545 ANP32CO43423 234 aa27.5■■□□□ 1.99
SNRPA-211ENST00000601545 RASSF7Q02833 373 aa27.5■■□□□ 1.99
SNRPA-211ENST00000601545 PROSER3Q2NL68 480 aa27.5■■□□□ 1.99
SNRPA-211ENST00000601545 C21orf2O43822 256 aa27.49■■□□□ 1.99
SNRPA-211ENST00000601545 SRGNP10124 158 aa27.49■■□□□ 1.99
SNRPA-211ENST00000601545 GPTP24298 496 aa27.49■■□□□ 1.99
SNRPA-211ENST00000601545 CFAP44Q96MT7 982 aa27.49■■□□□ 1.99
SNRPA-211ENST00000601545 BCORQ6W2J9 1755 aa27.48■■□□□ 1.99
SNRPA-211ENST00000601545 CNKSR1Q969H4 720 aa27.48■■□□□ 1.99
SNRPA-211ENST00000601545 MASTLQ96GX5 879 aa27.48■■□□□ 1.99
SNRPA-211ENST00000601545 LAMB4A4D0S4 1761 aa27.48■■□□□ 1.99
SNRPA-211ENST00000601545 SENP3-EIF4A1A0A087X0R7 540 aa27.47■■□□□ 1.99
SNRPA-211ENST00000601545 AIMP1Q12904 312 aaKnown RBP27.47■■□□□ 1.99
SNRPA-211ENST00000601545 STYK1Q6J9G0 422 aa27.47■■□□□ 1.99
SNRPA-211ENST00000601545 ARFGEF1Q9Y6D6 1849 aa27.46■■□□□ 1.99
SNRPA-211ENST00000601545 LRP10Q7Z4F1 713 aa27.46■■□□□ 1.99
SNRPA-211ENST00000601545 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
SNRPA-211ENST00000601545 GIGYF2Q6Y7W6 1299 aaKnown RBP27.45■■□□□ 1.98
SNRPA-211ENST00000601545 COPS6Q7L5N1 327 aa27.45■■□□□ 1.98
SNRPA-211ENST00000601545 NYXQ9GZU5 481 aa27.45■■□□□ 1.98
SNRPA-211ENST00000601545 MBIPQ9NS73 344 aa27.45■■□□□ 1.98
SNRPA-211ENST00000601545 SUSD4Q5VX71 490 aa27.44■■□□□ 1.98
SNRPA-211ENST00000601545 MRS2Q9HD23 443 aa27.44■■□□□ 1.98
SNRPA-211ENST00000601545 ANKRD31Q8N7Z5 1873 aa27.44■■□□□ 1.98
SNRPA-211ENST00000601545 LMNB1P20700 586 aa27.43■■□□□ 1.98
SNRPA-211ENST00000601545 ERFEQ4G0M1 354 aa27.43■■□□□ 1.98
SNRPA-211ENST00000601545 ZNF34Q8IZ26 560 aa27.43■■□□□ 1.98
SNRPA-211ENST00000601545 XAGE3Q8WTP9 111 aa27.43■■□□□ 1.98
SNRPA-211ENST00000601545 KLRG2A4D1S0 409 aaPredicted RBP27.42■■□□□ 1.98
SNRPA-211ENST00000601545 NPR1P16066 1061 aa27.42■■□□□ 1.98
SNRPA-211ENST00000601545 PRELPP51888 382 aa27.42■■□□□ 1.98
SNRPA-211ENST00000601545 CALD1Q05682 793 aaKnown RBP27.42■■□□□ 1.98
SNRPA-211ENST00000601545 HDGFL1Q5TGJ6 251 aa27.42■■□□□ 1.98
SNRPA-211ENST00000601545 DUSP27Q5VZP5 1158 aa27.42■■□□□ 1.98
SNRPA-211ENST00000601545 PRPF40BQ6NWY9 871 aaKnown RBP27.42■■□□□ 1.98
SNRPA-211ENST00000601545 DDX21Q9NR30 783 aaKnown RBP eCLIP27.42■■□□□ 1.98
SNRPA-211ENST00000601545 NFKBIEO00221 500 aa27.41■■□□□ 1.98
SNRPA-211ENST00000601545 KIF3CO14782 793 aa27.41■■□□□ 1.98
SNRPA-211ENST00000601545 ZNF853P0CG23 659 aa27.41■■□□□ 1.98
SNRPA-211ENST00000601545 GNAI1P63096 354 aa27.41■■□□□ 1.98
SNRPA-211ENST00000601545 CHPF2Q9P2E5 772 aa27.41■■□□□ 1.98
SNRPA-211ENST00000601545 UBN2Q6ZU65 1347 aa27.41■■□□□ 1.98
SNRPA-211ENST00000601545 NMRK2Q9NPI5 230 aa27.4■■□□□ 1.98
SNRPA-211ENST00000601545 IFT57Q9NWB7 429 aa27.4■■□□□ 1.98
SNRPA-211ENST00000601545 ELL2O00472 640 aaPredicted RBP27.39■■□□□ 1.98
SNRPA-211ENST00000601545 HOXB7P09629 217 aa27.38■■□□□ 1.97
SNRPA-211ENST00000601545 DLEC1Q9Y238 1755 aa27.37■■□□□ 1.97
SNRPA-211ENST00000601545 PPP1R42Q7Z4L9 355 aa27.37■■□□□ 1.97
SNRPA-211ENST00000601545 ALDH1B1P30837 517 aa27.36■■□□□ 1.97
SNRPA-211ENST00000601545 PARP10Q53GL7 1025 aa27.36■■□□□ 1.97
SNRPA-211ENST00000601545 DBF4Q9UBU7 674 aaPredicted RBP27.36■■□□□ 1.97
SNRPA-211ENST00000601545 ABCC12Q96J65 1359 aa27.35■■□□□ 1.97
SNRPA-211ENST00000601545 NTSR2O95665 410 aa27.35■■□□□ 1.97
SNRPA-211ENST00000601545 SOGA3Q5TF21 947 aa27.35■■□□□ 1.97
SNRPA-211ENST00000601545 UTP14AQ9BVJ6 771 aaKnown RBP27.35■■□□□ 1.97
SNRPA-211ENST00000601545 COL11A2P13942 1736 aaPredicted RBP27.35■■□□□ 1.97
SNRPA-211ENST00000601545 KDM2BQ8NHM5 1336 aa27.35■■□□□ 1.97
SNRPA-211ENST00000601545 HSP90AB3PQ58FF7 597 aa27.34■■□□□ 1.97
SNRPA-211ENST00000601545 C7orf43Q8WVR3 580 aa27.34■■□□□ 1.97
SNRPA-211ENST00000601545 TAOK3Q9H2K8 898 aa27.34■■□□□ 1.97
SNRPA-211ENST00000601545 RRAGCQ9HB90 399 aa27.34■■□□□ 1.97
SNRPA-211ENST00000601545 NUP98P52948 1817 aa27.33■■□□□ 1.97
SNRPA-211ENST00000601545 TCIRG1Q13488 830 aa27.33■■□□□ 1.97
SNRPA-211ENST00000601545 OLFM4Q6UX06 510 aa27.32■■□□□ 1.96
SNRPA-211ENST00000601545 ANKRD13DQ6ZTN6 518 aa27.32■■□□□ 1.96
SNRPA-211ENST00000601545 C8orf58Q8NAV2 365 aa27.32■■□□□ 1.96
SNRPA-211ENST00000601545 RPGRQ92834 1020 aaKnown RBP27.32■■□□□ 1.96
SNRPA-211ENST00000601545 ZNF428Q96B54 188 aa27.32■■□□□ 1.96
SNRPA-211ENST00000601545 CCDC93Q567U6 631 aa27.31■■□□□ 1.96
SNRPA-211ENST00000601545 HYPKQ9NX55 129 aa27.31■■□□□ 1.96
SNRPA-211ENST00000601545 SALL2Q9Y467 1007 aaPredicted RBP27.31■■□□□ 1.96
SNRPA-211ENST00000601545 SLX4Q8IY92 1834 aa27.31■■□□□ 1.96
SNRPA-211ENST00000601545 CRY2Q49AN0 593 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms