RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ADAMTS8Q9UP79 889 aa29.79■■■□□ 2.36
SSBP4-209ENST00000601357 RRP7AQ9Y3A4 280 aaKnown RBP29.78■■■□□ 2.36
SSBP4-209ENST00000601357 NUP98P52948 1817 aa29.76■■■□□ 2.35
SSBP4-209ENST00000601357 ST5P78524 1137 aa29.76■■■□□ 2.35
SSBP4-209ENST00000601357 HLFQ16534 295 aa29.76■■■□□ 2.35
SSBP4-209ENST00000601357 ERBB4Q15303 1308 aa29.75■■■□□ 2.35
SSBP4-209ENST00000601357 ARFGEF2Q9Y6D5 1785 aa29.75■■■□□ 2.35
SSBP4-209ENST00000601357 KIF3CO14782 793 aa29.75■■■□□ 2.35
SSBP4-209ENST00000601357 ZEB1P37275 1124 aaPredicted RBP29.75■■■□□ 2.35
SSBP4-209ENST00000601357 NBPF5PQ86XG9 351 aaPredicted RBP29.75■■■□□ 2.35
SSBP4-209ENST00000601357 TRIM35Q9UPQ4 493 aa29.75■■■□□ 2.35
SSBP4-209ENST00000601357 NIP7Q9Y221 180 aaKnown RBP eCLIP29.75■■■□□ 2.35
SSBP4-209ENST00000601357 ERVV-1B6SEH8 477 aa29.74■■■□□ 2.35
SSBP4-209ENST00000601357 RNF181Q9P0P0 153 aa29.74■■■□□ 2.35
SSBP4-209ENST00000601357 NPHP1O15259 732 aa29.73■■■□□ 2.35
SSBP4-209ENST00000601357 SRGNP10124 158 aa29.73■■■□□ 2.35
SSBP4-209ENST00000601357 NEUROD2Q15784 382 aa29.73■■■□□ 2.35
SSBP4-209ENST00000601357 ZNF622Q969S3 477 aaKnown RBP eCLIP29.73■■■□□ 2.35
SSBP4-209ENST00000601357 MAP3K15Q6ZN16 1313 aa29.72■■■□□ 2.35
SSBP4-209ENST00000601357 RASSF7Q02833 373 aa29.72■■■□□ 2.35
SSBP4-209ENST00000601357 SENP3-EIF4A1A0A087X0R7 540 aa29.71■■■□□ 2.35
SSBP4-209ENST00000601357 MYL6BP14649 208 aa29.71■■■□□ 2.35
SSBP4-209ENST00000601357 STYK1Q6J9G0 422 aa29.71■■■□□ 2.35
SSBP4-209ENST00000601357 TPTE2Q6XPS3 522 aa29.71■■■□□ 2.35
SSBP4-209ENST00000601357 TTLL7Q6ZT98 887 aa29.71■■■□□ 2.35
SSBP4-209ENST00000601357 NGEFQ8N5V2 710 aa29.71■■■□□ 2.35
SSBP4-209ENST00000601357 CACNA1SQ13698 1873 aa29.7■■■□□ 2.35
SSBP4-209ENST00000601357 FER1L6Q2WGJ9 1857 aa29.7■■■□□ 2.35
SSBP4-209ENST00000601357 CHL1O00533 1208 aa29.7■■■□□ 2.35
SSBP4-209ENST00000601357 PRELPP51888 382 aa29.7■■■□□ 2.35
SSBP4-209ENST00000601357 LRP10Q7Z4F1 713 aa29.7■■■□□ 2.35
SSBP4-209ENST00000601357 SLX4Q8IY92 1834 aa29.7■■■□□ 2.34
SSBP4-209ENST00000601357 KLRG2A4D1S0 409 aaPredicted RBP29.69■■■□□ 2.34
SSBP4-209ENST00000601357 NFKBIEO00221 500 aa29.69■■■□□ 2.34
SSBP4-209ENST00000601357 PDIA6Q15084 440 aa29.69■■■□□ 2.34
SSBP4-209ENST00000601357 KIF6Q6ZMV9 814 aa29.68■■■□□ 2.34
SSBP4-209ENST00000601357 MASTLQ96GX5 879 aa29.68■■■□□ 2.34
SSBP4-209ENST00000601357 CCDC88AQ3V6T2 1871 aa29.68■■■□□ 2.34
SSBP4-209ENST00000601357 LMNB1P20700 586 aa29.67■■■□□ 2.34
SSBP4-209ENST00000601357 CNKSR1Q969H4 720 aa29.67■■■□□ 2.34
SSBP4-209ENST00000601357 ZC3H4Q9UPT8 1303 aaKnown RBP29.67■■■□□ 2.34
SSBP4-209ENST00000601357 TIAM2Q8IVF5 1701 aa29.66■■■□□ 2.34
SSBP4-209ENST00000601357 C21orf2O43822 256 aa29.66■■■□□ 2.34
SSBP4-209ENST00000601357 NMRK2Q9NPI5 230 aa29.66■■■□□ 2.34
SSBP4-209ENST00000601357 CEP350Q5VT06 3117 aa29.65■■■□□ 2.34
SSBP4-209ENST00000601357 PRPF40BQ6NWY9 871 aaKnown RBP29.65■■■□□ 2.34
SSBP4-209ENST00000601357 ZBTB3Q9H5J0 574 aa29.65■■■□□ 2.34
SSBP4-209ENST00000601357 TNRC6CQ9HCJ0 1690 aaKnown RBP29.65■■■□□ 2.34
SSBP4-209ENST00000601357 EIF2S2P20042 333 aaKnown RBP29.64■■■□□ 2.34
SSBP4-209ENST00000601357 IBTKQ9P2D0 1353 aaPredicted RBP29.64■■■□□ 2.33
SSBP4-209ENST00000601357 FAM177BA6PVY3 158 aa29.63■■■□□ 2.33
SSBP4-209ENST00000601357 PROSER3Q2NL68 480 aa29.63■■■□□ 2.33
SSBP4-209ENST00000601357 UBN2Q6ZU65 1347 aa29.63■■■□□ 2.33
SSBP4-209ENST00000601357 NPR1P16066 1061 aa29.62■■■□□ 2.33
SSBP4-209ENST00000601357 KRT24Q2M2I5 525 aa29.62■■■□□ 2.33
SSBP4-209ENST00000601357 GIGYF2Q6Y7W6 1299 aaKnown RBP29.62■■■□□ 2.33
SSBP4-209ENST00000601357 NYXQ9GZU5 481 aa29.62■■■□□ 2.33
SSBP4-209ENST00000601357 KDM2BQ8NHM5 1336 aa29.62■■■□□ 2.33
SSBP4-209ENST00000601357 DICER1Q9UPY3 1922 aaKnown RBP29.61■■■□□ 2.33
SSBP4-209ENST00000601357 ZNF34Q8IZ26 560 aa29.61■■■□□ 2.33
SSBP4-209ENST00000601357 ZNF219Q9P2Y4 722 aaPredicted RBP29.61■■■□□ 2.33
SSBP4-209ENST00000601357 LTBP3Q9NS15 1303 aa29.61■■■□□ 2.33
SSBP4-209ENST00000601357 ABCC12Q96J65 1359 aa29.61■■■□□ 2.33
SSBP4-209ENST00000601357 C7orf43Q8WVR3 580 aa29.6■■■□□ 2.33
SSBP4-209ENST00000601357 LAS1LQ9Y4W2 734 aaKnown RBP29.6■■■□□ 2.33
SSBP4-209ENST00000601357 RIC1Q4ADV7 1423 aa29.6■■■□□ 2.33
SSBP4-209ENST00000601357 TOMM70O94826 608 aa29.59■■■□□ 2.33
SSBP4-209ENST00000601357 ANXA1P04083 346 aa29.59■■■□□ 2.33
SSBP4-209ENST00000601357 CFAP44Q96MT7 982 aa29.59■■■□□ 2.33
SSBP4-209ENST00000601357 APAF1O14727 1248 aa29.58■■■□□ 2.33
SSBP4-209ENST00000601357 GPTP24298 496 aa29.58■■■□□ 2.33
SSBP4-209ENST00000601357 CRY2Q49AN0 593 aa29.58■■■□□ 2.33
SSBP4-209ENST00000601357 SOGA3Q5TF21 947 aa29.58■■■□□ 2.33
SSBP4-209ENST00000601357 ANKRD36CQ5JPF3 1778 aa29.57■■■□□ 2.32
SSBP4-209ENST00000601357 GTF2E1P29083 439 aaPredicted RBP29.57■■■□□ 2.32
SSBP4-209ENST00000601357 SUSD4Q5VX71 490 aa29.57■■■□□ 2.32
SSBP4-209ENST00000601357 NUTM1Q86Y26 1132 aa29.57■■■□□ 2.32
SSBP4-209ENST00000601357 HOXB7P09629 217 aa29.56■■■□□ 2.32
SSBP4-209ENST00000601357 HSPA6P17066 643 aa29.56■■■□□ 2.32
SSBP4-209ENST00000601357 ERFEQ4G0M1 354 aa29.56■■■□□ 2.32
SSBP4-209ENST00000601357 CCDC184Q52MB2 194 aa29.56■■■□□ 2.32
SSBP4-209ENST00000601357 NECTIN2Q92692 538 aa29.56■■■□□ 2.32
SSBP4-209ENST00000601357 DDX21Q9NR30 783 aaKnown RBP eCLIP29.56■■■□□ 2.32
SSBP4-209ENST00000601357 NTSR2O95665 410 aa29.55■■■□□ 2.32
SSBP4-209ENST00000601357 ZNF853P0CG23 659 aa29.55■■■□□ 2.32
SSBP4-209ENST00000601357 TAOK3Q9H2K8 898 aa29.55■■■□□ 2.32
SSBP4-209ENST00000601357 GLTPD2A6NH11 291 aa29.54■■■□□ 2.32
SSBP4-209ENST00000601357 PARP10Q53GL7 1025 aa29.53■■■□□ 2.32
SSBP4-209ENST00000601357 COPS6Q7L5N1 327 aa29.53■■■□□ 2.32
SSBP4-209ENST00000601357 MBIPQ9NS73 344 aa29.53■■■□□ 2.32
SSBP4-209ENST00000601357 ZNF316A6NFI3 1004 aaPredicted RBP29.52■■■□□ 2.32
SSBP4-209ENST00000601357 XAGE3Q8WTP9 111 aa29.52■■■□□ 2.32
SSBP4-209ENST00000601357 RRAGCQ9HB90 399 aa29.52■■■□□ 2.32
SSBP4-209ENST00000601357 ALDH1B1P30837 517 aa29.51■■■□□ 2.31
SSBP4-209ENST00000601357 CCDC93Q567U6 631 aa29.51■■■□□ 2.31
SSBP4-209ENST00000601357 CHPF2Q9P2E5 772 aa29.51■■■□□ 2.31
SSBP4-209ENST00000601357 HDGFL1Q5TGJ6 251 aa29.5■■■□□ 2.31
SSBP4-209ENST00000601357 PPP1R42Q7Z4L9 355 aa29.5■■■□□ 2.31
SSBP4-209ENST00000601357 RBM46Q8TBY0 533 aaKnown RBP29.5■■■□□ 2.31
SSBP4-209ENST00000601357 IFT57Q9NWB7 429 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms