RNA–Protein interactions for RNA: ENST00000600813.1

LINC01872-203, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-203ENST00000600813 CCDC24Q8N4L8 307 aa18.04■□□□□ 0.48
LINC01872-203ENST00000600813 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC01872-203ENST00000600813 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
LINC01872-203ENST00000600813 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
LINC01872-203ENST00000600813 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
LINC01872-203ENST00000600813 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
LINC01872-203ENST00000600813 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
LINC01872-203ENST00000600813 A0A0G2JLW4 131 aa18.02■□□□□ 0.48
LINC01872-203ENST00000600813 KCNA3P22001 575 aa18.02■□□□□ 0.48
LINC01872-203ENST00000600813 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.48
LINC01872-203ENST00000600813 C10orf71Q711Q0 1435 aa18.02■□□□□ 0.48
LINC01872-203ENST00000600813 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
LINC01872-203ENST00000600813 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
LINC01872-203ENST00000600813 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
LINC01872-203ENST00000600813 TCERG1O14776 1098 aaKnown RBP18.01■□□□□ 0.47
LINC01872-203ENST00000600813 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
LINC01872-203ENST00000600813 BCORQ6W2J9 1755 aa18■□□□□ 0.47
LINC01872-203ENST00000600813 DPEP1P16444 411 aa18■□□□□ 0.47
LINC01872-203ENST00000600813 YBX3P16989 372 aaKnown RBP eCLIP18■□□□□ 0.47
LINC01872-203ENST00000600813 EXOSC9Q06265 439 aaKnown RBP18■□□□□ 0.47
LINC01872-203ENST00000600813 PRR5LQ6MZQ0 368 aa18■□□□□ 0.47
LINC01872-203ENST00000600813 PHAXQ9H814 394 aaKnown RBP18■□□□□ 0.47
LINC01872-203ENST00000600813 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
LINC01872-203ENST00000600813 NIP7Q9Y221 180 aaKnown RBP eCLIP18■□□□□ 0.47
LINC01872-203ENST00000600813 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
LINC01872-203ENST00000600813 AFDNP55196 1824 aaKnown RBP18■□□□□ 0.47
LINC01872-203ENST00000600813 RGL2O15211 777 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 VAMP4O75379 141 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 CHRNA5P30532 468 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 TGFB2P61812 414 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
LINC01872-203ENST00000600813 KIF6Q6ZMV9 814 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 KIF13BQ9NQT8 1826 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
LINC01872-203ENST00000600813 NRXN2Q9P2S2 1712 aa17.98■□□□□ 0.47
LINC01872-203ENST00000600813 GIGYF2Q6Y7W6 1299 aaKnown RBP17.98■□□□□ 0.47
LINC01872-203ENST00000600813 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
LINC01872-203ENST00000600813 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
LINC01872-203ENST00000600813 UBN2Q6ZU65 1347 aa17.98■□□□□ 0.47
LINC01872-203ENST00000600813 FAM177BA6PVY3 158 aa17.97■□□□□ 0.47
LINC01872-203ENST00000600813 GPTP24298 496 aa17.97■□□□□ 0.47
LINC01872-203ENST00000600813 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
LINC01872-203ENST00000600813 ZNF34Q8IZ26 560 aa17.97■□□□□ 0.47
LINC01872-203ENST00000600813 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
LINC01872-203ENST00000600813 SLFN5Q08AF3 891 aa17.96■□□□□ 0.47
LINC01872-203ENST00000600813 GPR162Q16538 588 aa17.96■□□□□ 0.47
LINC01872-203ENST00000600813 CCDC30Q5VVM6 783 aa17.96■□□□□ 0.47
LINC01872-203ENST00000600813 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
LINC01872-203ENST00000600813 G2E3Q7L622 706 aa17.96■□□□□ 0.47
LINC01872-203ENST00000600813 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
LINC01872-203ENST00000600813 N4BP2Q86UW6 1770 aaPredicted RBP17.96■□□□□ 0.47
LINC01872-203ENST00000600813 NUP98P52948 1817 aa17.95■□□□□ 0.46
LINC01872-203ENST00000600813 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
LINC01872-203ENST00000600813 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
LINC01872-203ENST00000600813 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
LINC01872-203ENST00000600813 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
LINC01872-203ENST00000600813 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
LINC01872-203ENST00000600813 ATP10DQ9P241 1426 aa17.93■□□□□ 0.46
LINC01872-203ENST00000600813 NUTM1Q86Y26 1132 aa17.93■□□□□ 0.46
LINC01872-203ENST00000600813 TRMT2AQ8IZ69 625 aaKnown RBP17.93■□□□□ 0.46
LINC01872-203ENST00000600813 CNBD1Q8NA66 436 aa17.93■□□□□ 0.46
LINC01872-203ENST00000600813 BRIP1Q9BX63 1249 aa17.93■□□□□ 0.46
LINC01872-203ENST00000600813 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
LINC01872-203ENST00000600813 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
LINC01872-203ENST00000600813 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
LINC01872-203ENST00000600813 ANKRD31Q8N7Z5 1873 aa17.91■□□□□ 0.46
LINC01872-203ENST00000600813 E9PSI1 815 aa17.91■□□□□ 0.46
LINC01872-203ENST00000600813 ERFEQ4G0M1 354 aa17.91■□□□□ 0.46
LINC01872-203ENST00000600813 C2CD5Q86YS7 1000 aa17.91■□□□□ 0.46
LINC01872-203ENST00000600813 SYNE4Q8N205 404 aa17.91■□□□□ 0.46
LINC01872-203ENST00000600813 ATP5J2-PTCD1G3V325 749 aa17.9■□□□□ 0.46
LINC01872-203ENST00000600813 NTSR2O95665 410 aa17.9■□□□□ 0.46
LINC01872-203ENST00000600813 NLRP10Q86W26 655 aa17.9■□□□□ 0.46
LINC01872-203ENST00000600813 ISCA1Q9BUE6 129 aa17.9■□□□□ 0.46
LINC01872-203ENST00000600813 PIM2Q9P1W9 311 aa17.9■□□□□ 0.46
LINC01872-203ENST00000600813 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
LINC01872-203ENST00000600813 DCAF8L1A6NGE4 600 aa17.89■□□□□ 0.45
LINC01872-203ENST00000600813 ABCC12Q96J65 1359 aa17.89■□□□□ 0.45
LINC01872-203ENST00000600813 KLRG2A4D1S0 409 aaPredicted RBP17.88■□□□□ 0.45
LINC01872-203ENST00000600813 PDE6BP35913 854 aa17.88■□□□□ 0.45
LINC01872-203ENST00000600813 ST5P78524 1137 aa17.88■□□□□ 0.45
LINC01872-203ENST00000600813 C3orf67Q6ZVT6 689 aa17.88■□□□□ 0.45
LINC01872-203ENST00000600813 RIC3Q7Z5B4 369 aa17.88■□□□□ 0.45
LINC01872-203ENST00000600813 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 H0YIN7 160 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 NPHP1O15259 732 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 SRGNP10124 158 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 HSP90AB3PQ58FF7 597 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
LINC01872-203ENST00000600813 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
LINC01872-203ENST00000600813 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
LINC01872-203ENST00000600813 GRIN3BO60391 1043 aa17.86■□□□□ 0.45
LINC01872-203ENST00000600813 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC01872-203ENST00000600813 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
LINC01872-203ENST00000600813 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC01872-203ENST00000600813 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
LINC01872-203ENST00000600813 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms