RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
ARHGEF1-221ENST00000600387 PDRG1Q9NUG6 133 aa22.24■■□□□ 1.15
ARHGEF1-221ENST00000600387 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
ARHGEF1-221ENST00000600387 USP42Q9H9J4 1324 aaKnown RBP22.24■■□□□ 1.15
ARHGEF1-221ENST00000600387 KIF20AO95235 890 aa22.23■■□□□ 1.15
ARHGEF1-221ENST00000600387 TTC41PQ6P2S7 1318 aa22.23■■□□□ 1.15
ARHGEF1-221ENST00000600387 HSP90AB4PQ58FF6 505 aa22.23■■□□□ 1.15
ARHGEF1-221ENST00000600387 NECTIN2Q92692 538 aa22.23■■□□□ 1.15
ARHGEF1-221ENST00000600387 HDGFP51858 240 aaKnown RBP22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 MAP3K11Q16584 847 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 CYP46A1Q9Y6A2 500 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 ELP1O95163 1332 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 CEP170BQ9Y4F5 1589 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 GNAT3A8MTJ3 354 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 KCNB2Q92953 911 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 ZSWIM6Q9HCJ5 1215 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
ARHGEF1-221ENST00000600387 GLRX3O76003 335 aaKnown RBP22.21■■□□□ 1.15
ARHGEF1-221ENST00000600387 KRT85P78386 507 aa22.21■■□□□ 1.15
ARHGEF1-221ENST00000600387 SYCP1Q15431 976 aa22.21■■□□□ 1.15
ARHGEF1-221ENST00000600387 NUP62CLQ9H1M0 184 aa22.21■■□□□ 1.15
ARHGEF1-221ENST00000600387 CCDC171Q6TFL3 1326 aa22.21■■□□□ 1.15
ARHGEF1-221ENST00000600387 SRGAP3O43295 1099 aa22.2■■□□□ 1.15
ARHGEF1-221ENST00000600387 JAKMIP1Q96N16 626 aaKnown RBP22.2■■□□□ 1.15
ARHGEF1-221ENST00000600387 FEZ1Q99689 392 aa22.2■■□□□ 1.15
ARHGEF1-221ENST00000600387 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF1-221ENST00000600387 VPS37CA5D8V6 355 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF1-221ENST00000600387 CPA1P15085 419 aa22.2■■□□□ 1.14
ARHGEF1-221ENST00000600387 EYA1Q99502 592 aa22.2■■□□□ 1.14
ARHGEF1-221ENST00000600387 TTC21AQ8NDW8 1320 aa22.19■■□□□ 1.14
ARHGEF1-221ENST00000600387 SOX12O15370 315 aa22.19■■□□□ 1.14
ARHGEF1-221ENST00000600387 TYRO3Q06418 890 aa22.19■■□□□ 1.14
ARHGEF1-221ENST00000600387 MRVI1Q9Y6F6 885 aa22.19■■□□□ 1.14
ARHGEF1-221ENST00000600387 PTGS1P23219 599 aa22.18■■□□□ 1.14
ARHGEF1-221ENST00000600387 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 TAF7Q15545 349 aaPredicted RBP22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 PRPF40BQ6NWY9 871 aaKnown RBP22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 TTC6Q86TZ1 520 aa22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 PDCP20941 246 aa22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 ADCK5Q3MIX3 580 aa22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 LARP1BQ659C4 914 aaKnown RBP22.17■■□□□ 1.14
ARHGEF1-221ENST00000600387 ZKSCAN1P17029 563 aaPredicted RBP22.16■■□□□ 1.14
ARHGEF1-221ENST00000600387 PTH1RQ03431 593 aa22.16■■□□□ 1.14
ARHGEF1-221ENST00000600387 ST3GAL1Q11201 340 aa22.16■■□□□ 1.14
ARHGEF1-221ENST00000600387 ME3Q16798 604 aa22.16■■□□□ 1.14
ARHGEF1-221ENST00000600387 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
ARHGEF1-221ENST00000600387 SMTNL1A8MU46 457 aa22.15■■□□□ 1.14
ARHGEF1-221ENST00000600387 AMPHP49418 695 aa22.15■■□□□ 1.14
ARHGEF1-221ENST00000600387 SPDYE4A6NLX3 237 aa22.15■■□□□ 1.14
ARHGEF1-221ENST00000600387 U2AF2P26368 475 aaKnown RBP eCLIP22.15■■□□□ 1.14
ARHGEF1-221ENST00000600387 SCAND2PQ9GZW5 306 aaPredicted RBP22.15■■□□□ 1.14
ARHGEF1-221ENST00000600387 TNMDQ9H2S6 317 aa22.15■■□□□ 1.14
ARHGEF1-221ENST00000600387 NECTIN1Q15223 517 aa22.14■■□□□ 1.14
ARHGEF1-221ENST00000600387 CCDC186Q7Z3E2 898 aa22.14■■□□□ 1.14
ARHGEF1-221ENST00000600387 LUZP1Q86V48 1076 aa22.14■■□□□ 1.14
ARHGEF1-221ENST00000600387 PHAXQ9H814 394 aaKnown RBP22.14■■□□□ 1.14
ARHGEF1-221ENST00000600387 DDX19AQ9NUU7 478 aaKnown RBP22.14■■□□□ 1.14
ARHGEF1-221ENST00000600387 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.13
ARHGEF1-221ENST00000600387 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
ARHGEF1-221ENST00000600387 LIG1P18858 919 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 GPATCH3Q96I76 525 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 OGFRQ9NZT2 677 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 PAXBP1Q9Y5B6 917 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 PTPRUQ92729 1446 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 NCBP1Q09161 790 aaKnown RBP22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 RBM43Q6ZSC3 357 aaKnown RBP22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 PLA2G4DQ86XP0 818 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 DRC7Q8IY82 874 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 CLASRPQ8N2M8 674 aaKnown RBP22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 IL17REQ8NFR9 667 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 CBX8Q9HC52 389 aa22.13■■□□□ 1.13
ARHGEF1-221ENST00000600387 NPHP3Q7Z494 1330 aa22.12■■□□□ 1.13
ARHGEF1-221ENST00000600387 GOLGA6L4A6NEF3 574 aa22.12■■□□□ 1.13
ARHGEF1-221ENST00000600387 NBPF7P0C2Y1 421 aaPredicted RBP22.12■■□□□ 1.13
ARHGEF1-221ENST00000600387 CAMK4Q16566 473 aa22.12■■□□□ 1.13
ARHGEF1-221ENST00000600387 ANO6Q4KMQ2 910 aa22.12■■□□□ 1.13
ARHGEF1-221ENST00000600387 ECHDC1Q9NTX5 307 aa22.12■■□□□ 1.13
ARHGEF1-221ENST00000600387 PSMA5P28066 241 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 OS9Q13438 667 aaPredicted RBP22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 NECAB1Q8N987 351 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 TDRD7Q8NHU6 1098 aaKnown RBP22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 TPCN1Q9ULQ1 816 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 ZNF75DP51815 510 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 CDC37L1Q7L3B6 337 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 EVI5LQ96CN4 794 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 CHMP4AQ9BY43 222 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 TRIM5Q9C035 493 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 DACT1Q9NYF0 836 aa22.11■■□□□ 1.13
ARHGEF1-221ENST00000600387 ANKRD1Q15327 319 aa22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 ZSCAN25Q6NSZ9 544 aa22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 HIP1O00291 1037 aa22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 CLSTN2Q9H4D0 955 aa22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 CGNQ9P2M7 1197 aaKnown RBP22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 CHMP3Q9Y3E7 222 aa22.1■■□□□ 1.13
ARHGEF1-221ENST00000600387 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 CAVIN2O95810 425 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 TNNT1P13805 278 aa22.09■■□□□ 1.13
ARHGEF1-221ENST00000600387 CREB3L3Q68CJ9 461 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms