RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 MYD88Q99836 296 aa26.4■■□□□ 1.82
GRAMD1A-212ENST00000600231 IL25Q9H293 177 aa26.4■■□□□ 1.82
GRAMD1A-212ENST00000600231 CLASRPQ8N2M8 674 aaKnown RBP26.4■■□□□ 1.82
GRAMD1A-212ENST00000600231 COL5A2P05997 1499 aaPredicted RBP26.4■■□□□ 1.82
GRAMD1A-212ENST00000600231 GCKRQ14397 625 aa26.39■■□□□ 1.81
GRAMD1A-212ENST00000600231 PCDH11XQ9BZA7 1347 aa26.38■■□□□ 1.81
GRAMD1A-212ENST00000600231 PCDH11YQ9BZA8 1340 aa26.38■■□□□ 1.81
GRAMD1A-212ENST00000600231 USP42Q9H9J4 1324 aaKnown RBP26.37■■□□□ 1.81
GRAMD1A-212ENST00000600231 ERC1Q8IUD2 1116 aa26.37■■□□□ 1.81
GRAMD1A-212ENST00000600231 PALD1Q9ULE6 856 aa26.37■■□□□ 1.81
GRAMD1A-212ENST00000600231 AK9Q5TCS8 1911 aa26.36■■□□□ 1.81
GRAMD1A-212ENST00000600231 TTC41PQ6P2S7 1318 aa26.36■■□□□ 1.81
GRAMD1A-212ENST00000600231 STRN4Q9NRL3 753 aa26.36■■□□□ 1.81
GRAMD1A-212ENST00000600231 CNTROBQ8N137 903 aa26.35■■□□□ 1.81
GRAMD1A-212ENST00000600231 MCCP23508 829 aa26.35■■□□□ 1.81
GRAMD1A-212ENST00000600231 CARD10Q9BWT7 1032 aa26.35■■□□□ 1.81
GRAMD1A-212ENST00000600231 PARP4Q9UKK3 1724 aaKnown RBP26.35■■□□□ 1.81
GRAMD1A-212ENST00000600231 GLRX3O76003 335 aaKnown RBP26.34■■□□□ 1.81
GRAMD1A-212ENST00000600231 IL2RBP14784 551 aa26.34■■□□□ 1.81
GRAMD1A-212ENST00000600231 NEK4P51957 841 aa26.34■■□□□ 1.81
GRAMD1A-212ENST00000600231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.34■■□□□ 1.81
GRAMD1A-212ENST00000600231 SASH1O94885 1247 aa26.34■■□□□ 1.81
GRAMD1A-212ENST00000600231 EPHA10Q5JZY3 1008 aa26.34■■□□□ 1.81
GRAMD1A-212ENST00000600231 DDX54Q8TDD1 881 aaKnown RBP26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 DDX11L8A8MPP1 907 aa26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 TRAK2O60296 914 aa26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 IFIT2P09913 472 aaKnown RBP26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 G3BP1Q13283 466 aaKnown RBP eCLIP26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 JARID2Q92833 1246 aaPredicted RBP26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 ECHDC1Q9NTX5 307 aa26.33■■□□□ 1.81
GRAMD1A-212ENST00000600231 GLI3P10071 1580 aa26.32■■□□□ 1.8
GRAMD1A-212ENST00000600231 ERVV-2B6SEH9 535 aa26.32■■□□□ 1.8
GRAMD1A-212ENST00000600231 ANAPC15P60006 121 aa26.32■■□□□ 1.8
GRAMD1A-212ENST00000600231 AACSQ86V21 672 aa26.32■■□□□ 1.8
GRAMD1A-212ENST00000600231 KLHDC4Q8TBB5 520 aa26.32■■□□□ 1.8
GRAMD1A-212ENST00000600231 SSFA2P28290 1259 aa26.31■■□□□ 1.8
GRAMD1A-212ENST00000600231 EVA1CP58658 441 aa26.31■■□□□ 1.8
GRAMD1A-212ENST00000600231 SIL1Q9H173 461 aa26.31■■□□□ 1.8
GRAMD1A-212ENST00000600231 SGSM2O43147 1006 aa26.31■■□□□ 1.8
GRAMD1A-212ENST00000600231 NKX1-1Q15270 411 aaPredicted RBP26.31■■□□□ 1.8
GRAMD1A-212ENST00000600231 GBP4Q96PP9 640 aa26.31■■□□□ 1.8
GRAMD1A-212ENST00000600231 NBPF26B4DH59 902 aa26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 ATP5J2-PTCD1G3V325 749 aa26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 NBPF14Q5TI25 921 aa26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 NBPF10Q6P3W6 841 aaKnown RBP26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 NBPF15Q8N660 670 aa26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 ABCA3Q99758 1704 aa26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 EAF2Q96CJ1 260 aaPredicted RBP26.3■■□□□ 1.8
GRAMD1A-212ENST00000600231 EPB41L2O43491 1005 aaKnown RBP26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 ZGPATQ8N5A5 531 aaKnown RBP26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 PLBD2Q8NHP8 589 aa26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 GPATCH3Q96I76 525 aa26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 CWC27Q6UX04 472 aaKnown RBP26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 UBE3BQ7Z3V4 1068 aa26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 GZF1Q9H116 711 aaPredicted RBP26.28■■□□□ 1.8
GRAMD1A-212ENST00000600231 CCDC8Q9H0W5 538 aaPredicted RBP26.27■■□□□ 1.8
GRAMD1A-212ENST00000600231 HSPA4P34932 840 aa26.27■■□□□ 1.8
GRAMD1A-212ENST00000600231 IL17RAQ96F46 866 aa26.27■■□□□ 1.8
GRAMD1A-212ENST00000600231 LAMB4A4D0S4 1761 aa26.26■■□□□ 1.79
GRAMD1A-212ENST00000600231 ARFGEF2Q9Y6D5 1785 aa26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 A0A087WZG4 1122 aa26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 CWC22Q9HCG8 908 aaKnown RBP26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 RAD50Q92878 1312 aa26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 A1BGP04217 495 aa26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 TMX3Q96JJ7 454 aa26.25■■□□□ 1.79
GRAMD1A-212ENST00000600231 AFDNP55196 1824 aaKnown RBP26.24■■□□□ 1.79
GRAMD1A-212ENST00000600231 UPF3BQ9BZI7 483 aaKnown RBP26.24■■□□□ 1.79
GRAMD1A-212ENST00000600231 LSG1Q9H089 658 aaKnown RBP26.24■■□□□ 1.79
GRAMD1A-212ENST00000600231 TLR7Q9NYK1 1049 aaKnown RBP26.24■■□□□ 1.79
GRAMD1A-212ENST00000600231 PKP1Q13835 747 aa26.24■■□□□ 1.79
GRAMD1A-212ENST00000600231 TTLL7Q6ZT98 887 aa26.24■■□□□ 1.79
GRAMD1A-212ENST00000600231 MCM2P49736 904 aa26.23■■□□□ 1.79
GRAMD1A-212ENST00000600231 NUCB2P80303 420 aa26.23■■□□□ 1.79
GRAMD1A-212ENST00000600231 DIAPH3Q9NSV4 1193 aa26.23■■□□□ 1.79
GRAMD1A-212ENST00000600231 NHSL1Q5SYE7 1610 aa26.23■■□□□ 1.79
GRAMD1A-212ENST00000600231 SHANK3Q9BYB0 1731 aa26.23■■□□□ 1.79
GRAMD1A-212ENST00000600231 KCPQ6ZWJ8 1503 aa26.23■■□□□ 1.79
GRAMD1A-212ENST00000600231 UBR2Q8IWV8 1755 aa26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 RFX5P48382 616 aaPredicted RBP26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 RABL6Q3YEC7 729 aaPredicted RBP26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 CLEC17AQ6ZS10 378 aa26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 COPRSQ9NQ92 184 aa26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 CYP2E1P05181 493 aaPredicted RBP26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 EVI5LQ96CN4 794 aa26.22■■□□□ 1.79
GRAMD1A-212ENST00000600231 CASP7P55210 303 aa26.21■■□□□ 1.79
GRAMD1A-212ENST00000600231 PTPN12Q05209 780 aaKnown RBP26.21■■□□□ 1.79
GRAMD1A-212ENST00000600231 KIAA1211Q6ZU35 1233 aa26.21■■□□□ 1.79
GRAMD1A-212ENST00000600231 BAG4O95429 457 aaKnown RBP26.2■■□□□ 1.78
GRAMD1A-212ENST00000600231 NOL8Q76FK4 1167 aaKnown RBP26.2■■□□□ 1.78
GRAMD1A-212ENST00000600231 COL15A1P39059 1388 aa26.19■■□□□ 1.78
GRAMD1A-212ENST00000600231 BTG4Q9NY30 223 aa26.19■■□□□ 1.78
GRAMD1A-212ENST00000600231 BRPF3Q9ULD4 1205 aa26.19■■□□□ 1.78
GRAMD1A-212ENST00000600231 RUFY2Q8WXA3 655 aa26.19■■□□□ 1.78
GRAMD1A-212ENST00000600231 BOLA2Q9H3K6 86 aa26.18■■□□□ 1.78
GRAMD1A-212ENST00000600231 SNX14Q9Y5W7 946 aa26.18■■□□□ 1.78
GRAMD1A-212ENST00000600231 RASEFQ8IZ41 740 aa26.18■■□□□ 1.78
GRAMD1A-212ENST00000600231 TNS2Q63HR2 1409 aa26.17■■□□□ 1.78
GRAMD1A-212ENST00000600231 CUL4AQ13619 759 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms