RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 POTEJP0CG39 1038 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 SRGNP10124 158 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
IRF3-225ENST00000600022 DDNO94850 711 aaPredicted RBP18.27■□□□□ 0.52
IRF3-225ENST00000600022 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
IRF3-225ENST00000600022 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
IRF3-225ENST00000600022 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.52
IRF3-225ENST00000600022 SLX4Q8IY92 1834 aa18.27■□□□□ 0.52
IRF3-225ENST00000600022 TIAM2Q8IVF5 1701 aa18.26■□□□□ 0.51
IRF3-225ENST00000600022 FAM177BA6PVY3 158 aa18.25■□□□□ 0.51
IRF3-225ENST00000600022 C7orf43Q8WVR3 580 aa18.25■□□□□ 0.51
IRF3-225ENST00000600022 NPHP1O15259 732 aa18.24■□□□□ 0.51
IRF3-225ENST00000600022 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
IRF3-225ENST00000600022 HLFQ16534 295 aa18.24■□□□□ 0.51
IRF3-225ENST00000600022 STYK1Q6J9G0 422 aa18.24■□□□□ 0.51
IRF3-225ENST00000600022 DPY19L2Q6NUT2 758 aa18.24■□□□□ 0.51
IRF3-225ENST00000600022 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
IRF3-225ENST00000600022 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
IRF3-225ENST00000600022 ST5P78524 1137 aa18.23■□□□□ 0.51
IRF3-225ENST00000600022 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
IRF3-225ENST00000600022 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
IRF3-225ENST00000600022 CNKSR1Q969H4 720 aa18.23■□□□□ 0.51
IRF3-225ENST00000600022 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
IRF3-225ENST00000600022 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
IRF3-225ENST00000600022 PDZRN3Q9UPQ7 1066 aa18.23■□□□□ 0.51
IRF3-225ENST00000600022 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
IRF3-225ENST00000600022 LTBP3Q9NS15 1303 aa18.22■□□□□ 0.51
IRF3-225ENST00000600022 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
IRF3-225ENST00000600022 CAPN15O75808 1086 aa18.2■□□□□ 0.5
IRF3-225ENST00000600022 CLEC4GQ6UXB4 293 aa18.2■□□□□ 0.5
IRF3-225ENST00000600022 SLC51AQ86UW1 340 aa18.2■□□□□ 0.5
IRF3-225ENST00000600022 NGEFQ8N5V2 710 aa18.2■□□□□ 0.5
IRF3-225ENST00000600022 NIP7Q9Y221 180 aaKnown RBP eCLIP18.2■□□□□ 0.5
IRF3-225ENST00000600022 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
IRF3-225ENST00000600022 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
IRF3-225ENST00000600022 KLRG2A4D1S0 409 aaPredicted RBP18.19■□□□□ 0.5
IRF3-225ENST00000600022 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
IRF3-225ENST00000600022 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
IRF3-225ENST00000600022 DICER1Q9UPY3 1922 aaKnown RBP18.18■□□□□ 0.5
IRF3-225ENST00000600022 HSPA1AP0DMV8 641 aaKnown RBP18.18■□□□□ 0.5
IRF3-225ENST00000600022 HSPA1BP0DMV9 641 aaKnown RBP18.18■□□□□ 0.5
IRF3-225ENST00000600022 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
IRF3-225ENST00000600022 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
IRF3-225ENST00000600022 NPR1P16066 1061 aa18.17■□□□□ 0.5
IRF3-225ENST00000600022 TPTE2Q6XPS3 522 aa18.17■□□□□ 0.5
IRF3-225ENST00000600022 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
IRF3-225ENST00000600022 ZNF541Q9H0D2 1346 aa18.17■□□□□ 0.5
IRF3-225ENST00000600022 ANP32CO43423 234 aa18.16■□□□□ 0.5
IRF3-225ENST00000600022 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
IRF3-225ENST00000600022 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
IRF3-225ENST00000600022 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
IRF3-225ENST00000600022 NUTM1Q86Y26 1132 aa18.15■□□□□ 0.5
IRF3-225ENST00000600022 TNS4Q8IZW8 715 aa18.15■□□□□ 0.5
IRF3-225ENST00000600022 MIER1Q8N108 512 aa18.15■□□□□ 0.5
IRF3-225ENST00000600022 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
IRF3-225ENST00000600022 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
IRF3-225ENST00000600022 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
IRF3-225ENST00000600022 FKBP4Q02790 459 aaKnown RBP eCLIP18.14■□□□□ 0.49
IRF3-225ENST00000600022 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
IRF3-225ENST00000600022 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
IRF3-225ENST00000600022 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
IRF3-225ENST00000600022 ABCC12Q96J65 1359 aa18.13■□□□□ 0.49
IRF3-225ENST00000600022 ITGBL1O95965 494 aaPredicted RBP18.12■□□□□ 0.49
IRF3-225ENST00000600022 MYL6BP14649 208 aa18.12■□□□□ 0.49
IRF3-225ENST00000600022 GPTP24298 496 aa18.12■□□□□ 0.49
IRF3-225ENST00000600022 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
IRF3-225ENST00000600022 L3MBTL3Q96JM7 780 aaPredicted RBP18.12■□□□□ 0.49
IRF3-225ENST00000600022 ARFGEF2Q9Y6D5 1785 aa18.12■□□□□ 0.49
IRF3-225ENST00000600022 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
IRF3-225ENST00000600022 EAPPQ56P03 285 aaPredicted RBP18.11■□□□□ 0.49
IRF3-225ENST00000600022 C3orf67Q6ZVT6 689 aa18.11■□□□□ 0.49
IRF3-225ENST00000600022 CREBZFQ9NS37 354 aa18.11■□□□□ 0.49
IRF3-225ENST00000600022 PASKQ96RG2 1323 aa18.11■□□□□ 0.49
IRF3-225ENST00000600022 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
IRF3-225ENST00000600022 ZBTB3Q9H5J0 574 aa18.1■□□□□ 0.49
IRF3-225ENST00000600022 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
IRF3-225ENST00000600022 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
IRF3-225ENST00000600022 IARSP41252 1262 aaKnown RBP18.09■□□□□ 0.49
IRF3-225ENST00000600022 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
IRF3-225ENST00000600022 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
IRF3-225ENST00000600022 LDHDQ86WU2 507 aa18.09■□□□□ 0.49
IRF3-225ENST00000600022 RTKN2Q8IZC4 609 aa18.09■□□□□ 0.49
IRF3-225ENST00000600022 COL4A5P29400 1685 aa18.09■□□□□ 0.49
IRF3-225ENST00000600022 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
IRF3-225ENST00000600022 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.49
IRF3-225ENST00000600022 FZD9O00144 591 aa18.08■□□□□ 0.48
IRF3-225ENST00000600022 RGL2O15211 777 aa18.08■□□□□ 0.48
IRF3-225ENST00000600022 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
IRF3-225ENST00000600022 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.48
IRF3-225ENST00000600022 IQCA1LA6NCM1 817 aa18.07■□□□□ 0.48
IRF3-225ENST00000600022 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
IRF3-225ENST00000600022 EPHX2P34913 555 aa18.07■□□□□ 0.48
IRF3-225ENST00000600022 FMR1Q06787 632 aaKnown RBP eCLIP18.07■□□□□ 0.48
IRF3-225ENST00000600022 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
IRF3-225ENST00000600022 MAP1SQ66K74 1059 aaPredicted RBP18.07■□□□□ 0.48
IRF3-225ENST00000600022 HACL1Q9UJ83 578 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms