RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PROSER3Q2NL68 480 aa36.55■■■■□ 3.44
SSBP4-206ENST00000599699 MAP3K15Q6ZN16 1313 aa36.55■■■■□ 3.44
SSBP4-206ENST00000599699 RGL2O15211 777 aa36.54■■■■□ 3.44
SSBP4-206ENST00000599699 GRIN3BO60391 1043 aa36.54■■■■□ 3.44
SSBP4-206ENST00000599699 HLFQ16534 295 aa36.54■■■■□ 3.44
SSBP4-206ENST00000599699 ERVV-1B6SEH8 477 aa36.53■■■■□ 3.44
SSBP4-206ENST00000599699 ELL2O00472 640 aaPredicted RBP36.53■■■■□ 3.44
SSBP4-206ENST00000599699 DIEXFQ68CQ4 756 aaKnown RBP36.53■■■■□ 3.44
SSBP4-206ENST00000599699 TSR2Q969E8 191 aaKnown RBP36.53■■■■□ 3.44
SSBP4-206ENST00000599699 ZBTB3Q9H5J0 574 aa36.53■■■■□ 3.44
SSBP4-206ENST00000599699 NIP7Q9Y221 180 aaKnown RBP eCLIP36.53■■■■□ 3.44
SSBP4-206ENST00000599699 CCER2I3L3R5 266 aa36.52■■■■□ 3.44
SSBP4-206ENST00000599699 DDX21Q9NR30 783 aaKnown RBP eCLIP36.52■■■■□ 3.44
SSBP4-206ENST00000599699 AFDNP55196 1824 aaKnown RBP36.51■■■■□ 3.44
SSBP4-206ENST00000599699 CHPF2Q9P2E5 772 aa36.51■■■■□ 3.44
SSBP4-206ENST00000599699 IL16Q14005 1332 aa36.51■■■■□ 3.43
SSBP4-206ENST00000599699 GOLGB1Q14789 3259 aaKnown RBP36.51■■■■□ 3.43
SSBP4-206ENST00000599699 NBPF5PQ86XG9 351 aaPredicted RBP36.5■■■■□ 3.43
SSBP4-206ENST00000599699 CNBD1Q8NA66 436 aa36.5■■■■□ 3.43
SSBP4-206ENST00000599699 N4BP2Q86UW6 1770 aaPredicted RBP36.5■■■■□ 3.43
SSBP4-206ENST00000599699 CHRNA5P30532 468 aa36.49■■■■□ 3.43
SSBP4-206ENST00000599699 AIMP1Q12904 312 aaKnown RBP36.49■■■■□ 3.43
SSBP4-206ENST00000599699 PRR5LQ6MZQ0 368 aa36.49■■■■□ 3.43
SSBP4-206ENST00000599699 LRP10Q7Z4F1 713 aa36.49■■■■□ 3.43
SSBP4-206ENST00000599699 CCDC24Q8N4L8 307 aa36.49■■■■□ 3.43
SSBP4-206ENST00000599699 NRXN2Q9P2S2 1712 aa36.48■■■■□ 3.43
SSBP4-206ENST00000599699 WDR63Q8IWG1 891 aa36.48■■■■□ 3.43
SSBP4-206ENST00000599699 C8orf58Q8NAV2 365 aa36.48■■■■□ 3.43
SSBP4-206ENST00000599699 BCS1LQ9Y276 419 aa36.48■■■■□ 3.43
SSBP4-206ENST00000599699 FAM177BA6PVY3 158 aa36.47■■■■□ 3.43
SSBP4-206ENST00000599699 YY1P25490 414 aa36.47■■■■□ 3.43
SSBP4-206ENST00000599699 COPS6Q7L5N1 327 aa36.47■■■■□ 3.43
SSBP4-206ENST00000599699 XAGE3Q8WTP9 111 aa36.47■■■■□ 3.43
SSBP4-206ENST00000599699 DBF4Q9UBU7 674 aaPredicted RBP36.47■■■■□ 3.43
SSBP4-206ENST00000599699 KIAA1551Q9HCM1 1747 aa36.46■■■■□ 3.43
SSBP4-206ENST00000599699 ST5P78524 1137 aa36.46■■■■□ 3.43
SSBP4-206ENST00000599699 PIM2Q9P1W9 311 aa36.46■■■■□ 3.43
SSBP4-206ENST00000599699 UTRNP46939 3433 aa36.45■■■■□ 3.43
SSBP4-206ENST00000599699 KCNA3P22001 575 aa36.45■■■■□ 3.43
SSBP4-206ENST00000599699 C2CD5Q86YS7 1000 aa36.43■■■■□ 3.42
SSBP4-206ENST00000599699 BRIP1Q9BX63 1249 aa36.43■■■■□ 3.42
SSBP4-206ENST00000599699 GPTP24298 496 aa36.42■■■■□ 3.42
SSBP4-206ENST00000599699 PDE6BP35913 854 aa36.42■■■■□ 3.42
SSBP4-206ENST00000599699 TPTE2Q6XPS3 522 aa36.42■■■■□ 3.42
SSBP4-206ENST00000599699 GIGYF2Q6Y7W6 1299 aaKnown RBP36.42■■■■□ 3.42
SSBP4-206ENST00000599699 CHMP4AQ9BY43 222 aa36.42■■■■□ 3.42
SSBP4-206ENST00000599699 HYPKQ9NX55 129 aa36.42■■■■□ 3.42
SSBP4-206ENST00000599699 H0YIN7 160 aa36.41■■■■□ 3.42
SSBP4-206ENST00000599699 TSPYL6Q8N831 410 aa36.41■■■■□ 3.42
SSBP4-206ENST00000599699 GTF2E1P29083 439 aaPredicted RBP36.4■■■■□ 3.42
SSBP4-206ENST00000599699 DALRD3Q5D0E6 543 aaKnown RBP36.4■■■■□ 3.42
SSBP4-206ENST00000599699 ATP10DQ9P241 1426 aa36.4■■■■□ 3.42
SSBP4-206ENST00000599699 FANCIQ9NVI1 1328 aa36.38■■■■□ 3.41
SSBP4-206ENST00000599699 CCDC30Q5VVM6 783 aa36.37■■■■□ 3.41
SSBP4-206ENST00000599699 NYXQ9GZU5 481 aa36.37■■■■□ 3.41
SSBP4-206ENST00000599699 PDZRN3Q9UPQ7 1066 aa36.36■■■■□ 3.41
SSBP4-206ENST00000599699 NUP98P52948 1817 aa36.36■■■■□ 3.41
SSBP4-206ENST00000599699 TWISTNBQ3B726 338 aaPredicted RBP36.35■■■■□ 3.41
SSBP4-206ENST00000599699 ZNF34Q8IZ26 560 aa36.35■■■■□ 3.41
SSBP4-206ENST00000599699 MIER1Q8N108 512 aa36.35■■■■□ 3.41
SSBP4-206ENST00000599699 GOLGA2Q08379 1002 aa36.34■■■■□ 3.41
SSBP4-206ENST00000599699 HSP90AB3PQ58FF7 597 aa36.34■■■■□ 3.41
SSBP4-206ENST00000599699 ZNF622Q969S3 477 aaKnown RBP eCLIP36.34■■■■□ 3.41
SSBP4-206ENST00000599699 MYH16Q9H6N6 1097 aa36.34■■■■□ 3.41
SSBP4-206ENST00000599699 UBN2Q6ZU65 1347 aa36.34■■■■□ 3.41
SSBP4-206ENST00000599699 ANKRD13DQ6ZTN6 518 aa36.33■■■■□ 3.41
SSBP4-206ENST00000599699 PLBD2Q8NHP8 589 aa36.32■■■■□ 3.4
SSBP4-206ENST00000599699 SPINK5Q9NQ38 1064 aaPredicted RBP36.32■■■■□ 3.4
SSBP4-206ENST00000599699 PARP10Q53GL7 1025 aa36.31■■■■□ 3.4
SSBP4-206ENST00000599699 SUSD4Q5VX71 490 aa36.31■■■■□ 3.4
SSBP4-206ENST00000599699 ARHGAP27Q6ZUM4 889 aa36.31■■■■□ 3.4
SSBP4-206ENST00000599699 NUTM1Q86Y26 1132 aa36.31■■■■□ 3.4
SSBP4-206ENST00000599699 TTLL6Q8N841 843 aa36.31■■■■□ 3.4
SSBP4-206ENST00000599699 PPP1R42Q7Z4L9 355 aa36.3■■■■□ 3.4
SSBP4-206ENST00000599699 STK31Q9BXU1 1019 aa36.3■■■■□ 3.4
SSBP4-206ENST00000599699 ANKRD31Q8N7Z5 1873 aa36.3■■■■□ 3.4
SSBP4-206ENST00000599699 CHD4Q14839 1912 aa36.3■■■■□ 3.4
SSBP4-206ENST00000599699 BRCA1P38398 1863 aaKnown RBP36.29■■■■□ 3.4
SSBP4-206ENST00000599699 TCERG1O14776 1098 aaKnown RBP36.29■■■■□ 3.4
SSBP4-206ENST00000599699 PHAXQ9H814 394 aaKnown RBP36.29■■■■□ 3.4
SSBP4-206ENST00000599699 EXOSC9Q06265 439 aaKnown RBP36.28■■■■□ 3.4
SSBP4-206ENST00000599699 TCIRG1Q13488 830 aa36.28■■■■□ 3.4
SSBP4-206ENST00000599699 ERFEQ4G0M1 354 aa36.28■■■■□ 3.4
SSBP4-206ENST00000599699 RIC3Q7Z5B4 369 aa36.26■■■■□ 3.4
SSBP4-206ENST00000599699 UTP14AQ9BVJ6 771 aaKnown RBP36.26■■■■□ 3.4
SSBP4-206ENST00000599699 ZNF521Q96K83 1311 aa36.26■■■■□ 3.39
SSBP4-206ENST00000599699 IBTKQ9P2D0 1353 aaPredicted RBP36.26■■■■□ 3.39
SSBP4-206ENST00000599699 NTSR2O95665 410 aa36.24■■■■□ 3.39
SSBP4-206ENST00000599699 SRGNP10124 158 aa36.24■■■■□ 3.39
SSBP4-206ENST00000599699 MASTLQ96GX5 879 aa36.24■■■■□ 3.39
SSBP4-206ENST00000599699 STYK1Q6J9G0 422 aa36.23■■■■□ 3.39
SSBP4-206ENST00000599699 NLRP10Q86W26 655 aa36.23■■■■□ 3.39
SSBP4-206ENST00000599699 ABCC12Q96J65 1359 aa36.23■■■■□ 3.39
SSBP4-206ENST00000599699 DDX58O95786 925 aaKnown RBP36.22■■■■□ 3.39
SSBP4-206ENST00000599699 CNKSR1Q969H4 720 aa36.22■■■■□ 3.39
SSBP4-206ENST00000599699 DLEC1Q9Y238 1755 aa36.22■■■■□ 3.39
SSBP4-206ENST00000599699 COL11A2P13942 1736 aaPredicted RBP36.2■■■■□ 3.39
SSBP4-206ENST00000599699 VAMP4O75379 141 aa36.2■■■■□ 3.39
SSBP4-206ENST00000599699 NPR1P16066 1061 aa36.2■■■■□ 3.39
SSBP4-206ENST00000599699 ZNF219Q9P2Y4 722 aaPredicted RBP36.2■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms