RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	MSX1	P28360	303 aa		11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	C11orf91	Q3C1V1	193 aa		11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	RHPN1	Q8TCX5	695 aa		11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	KLK14	Q9P0G3	267 aa		11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	STIM2	Q9P246	746 aa		11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	BIN2	Q9UBW5	565 aa	Predicted RBP	11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	MPST	P25325	297 aa		11.38	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	MFAP1	P55081	439 aa	Known RBP	11.38	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	CCDC27	Q2M243	656 aa		11.38	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	FAM26D	Q5JW98	314 aa		11.38	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	KLRG1	Q96E93	195 aa		11.38	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	SENP2	Q9HC62	589 aa		11.38	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	SENP3-EIF4A1	A0A087X0R7	540 aa		11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	TERT	O14746	1132 aa	Known RBP	11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	FAM13A	O94988	1023 aa		11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	BRD2	P25440	801 aa	Known RBP	11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	ARHGAP4	P98171	946 aa		11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	KIFC2	Q96AC6	838 aa		11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	TRIM47	Q96LD4	638 aa		11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	DYRK1B	Q9Y463	629 aa		11.37	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	SNRPB	P14678	240 aa	Known RBP	11.36	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	BCS1L	Q9Y276	419 aa		11.36	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	GPC6	Q9Y625	555 aa	Predicted RBP	11.36	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	IFT43	Q96FT9	208 aa		11.35	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	ZIC5	Q96T25	663 aa		11.35	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	ZBTB39	O15060	712 aa		11.34	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	PTS	Q03393	145 aa		11.34	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	BICDL1	Q6ZP65	573 aa		11.34	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	ETFBKMT	Q8IXQ9	262 aa		11.34	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	ABTB2	Q8N961	1025 aa		11.34	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	GPAM	Q9HCL2	828 aa		11.34	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	F11	P03951	625 aa		11.33	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.33	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	ZNF280C	Q8ND82	737 aa		11.33	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	HSH2D	Q96JZ2	352 aa		11.33	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	SUSD3	Q96L08	255 aa		11.33	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	GAS2L1	Q99501	681 aa	Predicted RBP	11.33	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	SLC35F4	A4IF30	521 aa		11.32	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	EIF1AX	P47813	144 aa	Known RBP	11.32	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	HIF1A	Q16665	826 aa		11.32	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	NOM1	Q5C9Z4	860 aa	Known RBP	11.32	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	CRISPLD1	Q9H336	500 aa		11.32	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	RUBCNL	Q9H714	662 aa		11.32	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	LOC100996750	A0A140TA64	210 aa		11.31	□□□□□ -0.6
SOX2-OT-231	ENST00000599082		A0A1W2PNR3	127 aa		11.31	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	TGFBR3L	H3BV60	316 aa		11.31	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	KRTAP4-6	Q9BYQ5	205 aa		11.31	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	MARS	P56192	900 aa	Known RBP	11.3	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	ALKBH2	Q6NS38	261 aa		11.3	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	ANKIB1	Q9P2G1	1089 aa		11.3	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	DMGDH	Q9UI17	866 aa	Known RBP	11.3	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	IER5	Q5VY09	327 aa		11.29	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	LRRC69	Q6ZNQ3	347 aa		11.29	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	ATCAY	Q86WG3	371 aa		11.29	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	TREML1	Q86YW5	311 aa		11.29	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	FZD6	O60353	706 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	MICAL2	O94851	1124 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	ZAP70	P43403	619 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	PGBD3	Q8N328	593 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	CCDC155	Q8N6L0	562 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	RGS22	Q8NE09	1264 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	NEUROD4	Q9HD90	331 aa		11.28	□□□□□ -0.6
SOX2-OT-231	ENST00000599082	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.27	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	CCDC87	Q9NVE4	849 aa		11.27	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	DCTN4	Q9UJW0	460 aa		11.27	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	THBS1	P07996	1170 aa		11.26	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	MAPK1	P28482	360 aa		11.26	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	AAMP	Q13685	434 aa		11.26	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	RIPOR1	Q6ZS17	1223 aa		11.26	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	NLRP8	Q86W28	1048 aa		11.26	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	GJA3	Q9Y6H8	435 aa		11.26	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	OPLAH	O14841	1288 aa		11.25	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	BTLA	Q7Z6A9	289 aa		11.25	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	FAM181B	A6NEQ2	426 aa		11.24	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	IDH3A	P50213	366 aa		11.24	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	LBR	Q14739	615 aa	Known RBP	11.24	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	EFHC2	Q5JST6	749 aa		11.24	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.24	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	BRPF3	Q9ULD4	1205 aa		11.24	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	NDUFB5	O43674	189 aa		11.23	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	EDEM1	Q92611	657 aa		11.23	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	MZF1	P28698	734 aa	Predicted RBP	11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	INPP5B	P32019	993 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	TYRO3	Q06418	890 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	DBN1	Q16643	649 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	SAMD5	Q5TGI4	173 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	GPR152	Q8TDT2	470 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	RBCK1	Q9BYM8	510 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	NUCKS1	Q9H1E3	243 aa	Known RBP	11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	POLI	Q9UNA4	740 aa		11.22	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	PDGFA	P04085	211 aa		11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	ITGA6	P23229	1130 aa		11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	ARSD	P51689	593 aa		11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	DNM1	Q05193	864 aa	Known RBP	11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	UBAP2L	Q14157	1087 aa	Known RBP	11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	TRIM22	Q8IYM9	498 aa		11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	ASB16	Q96NS5	453 aa		11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082	FAM13B	Q9NYF5	915 aa		11.21	□□□□□ -0.61
SOX2-OT-231	ENST00000599082		H7C1W4	665 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms