RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 NFKBIEO00221 500 aa30.22■■■□□ 2.43
CCDC61-207ENST00000599044 RIPK4P57078 832 aa30.22■■■□□ 2.43
CCDC61-207ENST00000599044 NGEFQ8N5V2 710 aa30.22■■■□□ 2.43
CCDC61-207ENST00000599044 TNRC6CQ9HCJ0 1690 aaKnown RBP30.22■■■□□ 2.43
CCDC61-207ENST00000599044 NPHP1O15259 732 aa30.21■■■□□ 2.43
CCDC61-207ENST00000599044 ST5P78524 1137 aa30.2■■■□□ 2.43
CCDC61-207ENST00000599044 NBPF5PQ86XG9 351 aaPredicted RBP30.2■■■□□ 2.43
CCDC61-207ENST00000599044 NIP7Q9Y221 180 aaKnown RBP eCLIP30.2■■■□□ 2.43
CCDC61-207ENST00000599044 ZNF652Q9Y2D9 606 aa30.2■■■□□ 2.43
CCDC61-207ENST00000599044 LAMB4A4D0S4 1761 aa30.2■■■□□ 2.42
CCDC61-207ENST00000599044 C21orf2O43822 256 aa30.19■■■□□ 2.42
CCDC61-207ENST00000599044 TMPOP42166 694 aaKnown RBP30.19■■■□□ 2.42
CCDC61-207ENST00000599044 CCDC146Q8IYE0 955 aa30.19■■■□□ 2.42
CCDC61-207ENST00000599044 PDZRN3Q9UPQ7 1066 aa30.19■■■□□ 2.42
CCDC61-207ENST00000599044 RRP7AQ9Y3A4 280 aaKnown RBP30.19■■■□□ 2.42
CCDC61-207ENST00000599044 FAM177BA6PVY3 158 aa30.18■■■□□ 2.42
CCDC61-207ENST00000599044 SRGNP10124 158 aa30.18■■■□□ 2.42
CCDC61-207ENST00000599044 LMNB1P20700 586 aa30.17■■■□□ 2.42
CCDC61-207ENST00000599044 TTLL7Q6ZT98 887 aa30.17■■■□□ 2.42
CCDC61-207ENST00000599044 TOMM70O94826 608 aa30.16■■■□□ 2.42
CCDC61-207ENST00000599044 MYL6BP14649 208 aa30.16■■■□□ 2.42
CCDC61-207ENST00000599044 TSPYL4Q9UJ04 414 aa30.16■■■□□ 2.42
CCDC61-207ENST00000599044 TIAM2Q8IVF5 1701 aa30.16■■■□□ 2.42
CCDC61-207ENST00000599044 RGL2O15211 777 aa30.15■■■□□ 2.42
CCDC61-207ENST00000599044 STYK1Q6J9G0 422 aa30.15■■■□□ 2.42
CCDC61-207ENST00000599044 RRAGCQ9HB90 399 aa30.15■■■□□ 2.42
CCDC61-207ENST00000599044 WDR90Q96KV7 1748 aa30.15■■■□□ 2.42
CCDC61-207ENST00000599044 NEUROD2Q15784 382 aa30.13■■■□□ 2.41
CCDC61-207ENST00000599044 TPTE2Q6XPS3 522 aa30.13■■■□□ 2.41
CCDC61-207ENST00000599044 MASTLQ96GX5 879 aa30.13■■■□□ 2.41
CCDC61-207ENST00000599044 KDM2BQ8NHM5 1336 aa30.13■■■□□ 2.41
CCDC61-207ENST00000599044 CACNA1SQ13698 1873 aa30.12■■■□□ 2.41
CCDC61-207ENST00000599044 PRPF40BQ6NWY9 871 aaKnown RBP30.12■■■□□ 2.41
CCDC61-207ENST00000599044 CNKSR1Q969H4 720 aa30.12■■■□□ 2.41
CCDC61-207ENST00000599044 DICER1Q9UPY3 1922 aaKnown RBP30.12■■■□□ 2.41
CCDC61-207ENST00000599044 SLX4Q8IY92 1834 aa30.11■■■□□ 2.41
CCDC61-207ENST00000599044 KLRG2A4D1S0 409 aaPredicted RBP30.11■■■□□ 2.41
CCDC61-207ENST00000599044 ADAMTS8Q9UP79 889 aa30.11■■■□□ 2.41
CCDC61-207ENST00000599044 MAP3K15Q6ZN16 1313 aa30.11■■■□□ 2.41
CCDC61-207ENST00000599044 ERVV-1B6SEH8 477 aa30.1■■■□□ 2.41
CCDC61-207ENST00000599044 FER1L6Q2WGJ9 1857 aa30.1■■■□□ 2.41
CCDC61-207ENST00000599044 PDIA6Q15084 440 aa30.09■■■□□ 2.41
CCDC61-207ENST00000599044 ZBTB3Q9H5J0 574 aa30.09■■■□□ 2.41
CCDC61-207ENST00000599044 PRKRIP1Q9H875 184 aaPredicted RBP30.09■■■□□ 2.41
CCDC61-207ENST00000599044 TRIM35Q9UPQ4 493 aa30.09■■■□□ 2.41
CCDC61-207ENST00000599044 ARFGEF2Q9Y6D5 1785 aa30.09■■■□□ 2.41
CCDC61-207ENST00000599044 APLP1P51693 650 aa30.08■■■□□ 2.41
CCDC61-207ENST00000599044 LRP10Q7Z4F1 713 aa30.08■■■□□ 2.41
CCDC61-207ENST00000599044 C7orf43Q8WVR3 580 aa30.08■■■□□ 2.41
CCDC61-207ENST00000599044 ZC3H4Q9UPT8 1303 aaKnown RBP30.07■■■□□ 2.4
CCDC61-207ENST00000599044 EIF2S2P20042 333 aaKnown RBP30.07■■■□□ 2.4
CCDC61-207ENST00000599044 RBM46Q8TBY0 533 aaKnown RBP30.07■■■□□ 2.4
CCDC61-207ENST00000599044 RUNDC1Q96C34 613 aa30.07■■■□□ 2.4
CCDC61-207ENST00000599044 GLTPD2A6NH11 291 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 ANXA1P04083 346 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 NPR1P16066 1061 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 GPTP24298 496 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 LMOD3Q0VAK6 560 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 WDR43Q15061 677 aaKnown RBP eCLIP30.06■■■□□ 2.4
CCDC61-207ENST00000599044 PROSER3Q2NL68 480 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 KIF6Q6ZMV9 814 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 NUTM1Q86Y26 1132 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 BABAM1Q9NWV8 329 aa30.06■■■□□ 2.4
CCDC61-207ENST00000599044 UBN2Q6ZU65 1347 aa30.05■■■□□ 2.4
CCDC61-207ENST00000599044 KRT24Q2M2I5 525 aa30.05■■■□□ 2.4
CCDC61-207ENST00000599044 ABCC12Q96J65 1359 aa30.04■■■□□ 2.4
CCDC61-207ENST00000599044 ERFEQ4G0M1 354 aa30.04■■■□□ 2.4
CCDC61-207ENST00000599044 OLFM4Q6UX06 510 aa30.04■■■□□ 2.4
CCDC61-207ENST00000599044 C16orf71Q8IYS4 520 aaPredicted RBP30.04■■■□□ 2.4
CCDC61-207ENST00000599044 ERBB4Q15303 1308 aa30.03■■■□□ 2.4
CCDC61-207ENST00000599044 GTF2E1P29083 439 aaPredicted RBP30.03■■■□□ 2.4
CCDC61-207ENST00000599044 NECTIN2Q92692 538 aa30.03■■■□□ 2.4
CCDC61-207ENST00000599044 TAOK3Q9H2K8 898 aa30.03■■■□□ 2.4
CCDC61-207ENST00000599044 NUP98P52948 1817 aa30.03■■■□□ 2.4
CCDC61-207ENST00000599044 LTBP3Q9NS15 1303 aa30.02■■■□□ 2.4
CCDC61-207ENST00000599044 CHL1O00533 1208 aa30.02■■■□□ 2.4
CCDC61-207ENST00000599044 SUSD4Q5VX71 490 aa30.02■■■□□ 2.4
CCDC61-207ENST00000599044 ZNF34Q8IZ26 560 aa30.02■■■□□ 2.4
CCDC61-207ENST00000599044 LAS1LQ9Y4W2 734 aaKnown RBP30.01■■■□□ 2.39
CCDC61-207ENST00000599044 POTECB2RU33 542 aa30■■■□□ 2.39
CCDC61-207ENST00000599044 GIGYF2Q6Y7W6 1299 aaKnown RBP30■■■□□ 2.39
CCDC61-207ENST00000599044 NYXQ9GZU5 481 aa29.99■■■□□ 2.39
CCDC61-207ENST00000599044 SOGA3Q5TF21 947 aa29.98■■■□□ 2.39
CCDC61-207ENST00000599044 DNAJC5GQ8N7S2 189 aa29.98■■■□□ 2.39
CCDC61-207ENST00000599044 VEGFAP15692 232 aaPredicted RBP29.97■■■□□ 2.39
CCDC61-207ENST00000599044 FSTL1Q12841 308 aa29.97■■■□□ 2.39
CCDC61-207ENST00000599044 CRY2Q49AN0 593 aa29.97■■■□□ 2.39
CCDC61-207ENST00000599044 IFFO2Q5TF58 517 aa29.97■■■□□ 2.39
CCDC61-207ENST00000599044 NTSR2O95665 410 aa29.96■■■□□ 2.39
CCDC61-207ENST00000599044 CCDC93Q567U6 631 aa29.96■■■□□ 2.39
CCDC61-207ENST00000599044 HTRA3P83110 453 aa29.95■■■□□ 2.39
CCDC61-207ENST00000599044 C3orf67Q6ZVT6 689 aa29.95■■■□□ 2.39
CCDC61-207ENST00000599044 DPY19L2Q6NUT2 758 aa29.94■■■□□ 2.38
CCDC61-207ENST00000599044 COPS6Q7L5N1 327 aa29.94■■■□□ 2.38
CCDC61-207ENST00000599044 ALDH1B1P30837 517 aa29.93■■■□□ 2.38
CCDC61-207ENST00000599044 AIMP1Q12904 312 aaKnown RBP29.93■■■□□ 2.38
CCDC61-207ENST00000599044 SLC51AQ86UW1 340 aa29.93■■■□□ 2.38
CCDC61-207ENST00000599044 XAGE3Q8WTP9 111 aa29.93■■■□□ 2.38
CCDC61-207ENST00000599044 IBTKQ9P2D0 1353 aaPredicted RBP29.92■■■□□ 2.38
CCDC61-207ENST00000599044 DDNO94850 711 aaPredicted RBP29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms