RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 SRP68Q9UHB9 627 aaKnown RBP24.46■■□□□ 1.51
C19orf48-207ENST00000596655 USP42Q9H9J4 1324 aaKnown RBP24.45■■□□□ 1.51
C19orf48-207ENST00000596655 STARD3NLO95772 234 aa24.45■■□□□ 1.5
C19orf48-207ENST00000596655 FTSJ3Q8IY81 847 aaKnown RBP24.45■■□□□ 1.5
C19orf48-207ENST00000596655 NOB1Q9ULX3 412 aaKnown RBP24.45■■□□□ 1.5
C19orf48-207ENST00000596655 COL15A1P39059 1388 aa24.45■■□□□ 1.5
C19orf48-207ENST00000596655 CHL1O00533 1208 aa24.44■■□□□ 1.5
C19orf48-207ENST00000596655 PDE4AP27815 886 aa24.44■■□□□ 1.5
C19orf48-207ENST00000596655 TAF7Q15545 349 aaPredicted RBP24.43■■□□□ 1.5
C19orf48-207ENST00000596655 TEX13AQ9BXU3 409 aaPredicted RBP24.43■■□□□ 1.5
C19orf48-207ENST00000596655 DDX19BQ9UMR2 479 aa24.43■■□□□ 1.5
C19orf48-207ENST00000596655 LAS1LQ9Y4W2 734 aaKnown RBP24.43■■□□□ 1.5
C19orf48-207ENST00000596655 CD2APQ9Y5K6 639 aa24.43■■□□□ 1.5
C19orf48-207ENST00000596655 MRPL50Q8N5N7 158 aaKnown RBP24.43■■□□□ 1.5
C19orf48-207ENST00000596655 PCDHB15Q9Y5E8 787 aa24.43■■□□□ 1.5
C19orf48-207ENST00000596655 KIF13BQ9NQT8 1826 aa24.42■■□□□ 1.5
C19orf48-207ENST00000596655 TSPYL6Q8N831 410 aa24.42■■□□□ 1.5
C19orf48-207ENST00000596655 MIS18AQ9NYP9 233 aa24.41■■□□□ 1.5
C19orf48-207ENST00000596655 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
C19orf48-207ENST00000596655 LAMB4A4D0S4 1761 aa24.39■■□□□ 1.5
C19orf48-207ENST00000596655 ZPR1O75312 459 aa24.39■■□□□ 1.49
C19orf48-207ENST00000596655 GPR162Q16538 588 aa24.39■■□□□ 1.49
C19orf48-207ENST00000596655 C8orf58Q8NAV2 365 aa24.39■■□□□ 1.49
C19orf48-207ENST00000596655 CHD4Q14839 1912 aa24.38■■□□□ 1.49
C19orf48-207ENST00000596655 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
C19orf48-207ENST00000596655 USPL1Q5W0Q7 1092 aa24.38■■□□□ 1.49
C19orf48-207ENST00000596655 NARFQ9UHQ1 456 aa24.38■■□□□ 1.49
C19orf48-207ENST00000596655 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
C19orf48-207ENST00000596655 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
C19orf48-207ENST00000596655 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
C19orf48-207ENST00000596655 USP16Q9Y5T5 823 aa24.37■■□□□ 1.49
C19orf48-207ENST00000596655 KIAA1551Q9HCM1 1747 aa24.37■■□□□ 1.49
C19orf48-207ENST00000596655 SCN7AQ01118 1682 aa24.37■■□□□ 1.49
C19orf48-207ENST00000596655 A1BGP04217 495 aa24.36■■□□□ 1.49
C19orf48-207ENST00000596655 PARP3Q9Y6F1 533 aa24.36■■□□□ 1.49
C19orf48-207ENST00000596655 TMEM57Q8N5G2 664 aa24.35■■□□□ 1.49
C19orf48-207ENST00000596655 RWDD1Q9H446 243 aaPredicted RBP24.35■■□□□ 1.49
C19orf48-207ENST00000596655 ZNF330Q9Y3S2 320 aaPredicted RBP24.35■■□□□ 1.49
C19orf48-207ENST00000596655 C10orf71Q711Q0 1435 aa24.35■■□□□ 1.49
C19orf48-207ENST00000596655 N4BP2Q86UW6 1770 aaPredicted RBP24.35■■□□□ 1.49
C19orf48-207ENST00000596655 UTRNP46939 3433 aa24.35■■□□□ 1.49
C19orf48-207ENST00000596655 ZBTB40Q9NUA8 1239 aa24.35■■□□□ 1.49
C19orf48-207ENST00000596655 ABCC4O15439 1325 aa24.34■■□□□ 1.49
C19orf48-207ENST00000596655 IL6STP40189 918 aaPredicted RBP24.34■■□□□ 1.49
C19orf48-207ENST00000596655 DDR1Q08345 913 aa24.34■■□□□ 1.49
C19orf48-207ENST00000596655 HDAC1Q13547 482 aaPredicted RBP24.34■■□□□ 1.49
C19orf48-207ENST00000596655 AFDNP55196 1824 aaKnown RBP24.34■■□□□ 1.49
C19orf48-207ENST00000596655 GOLGB1Q14789 3259 aaKnown RBP24.34■■□□□ 1.49
C19orf48-207ENST00000596655 BCL2L12Q9HB09 334 aa24.33■■□□□ 1.49
C19orf48-207ENST00000596655 BCORQ6W2J9 1755 aa24.32■■□□□ 1.48
C19orf48-207ENST00000596655 A0A087WZG4 1122 aa24.32■■□□□ 1.48
C19orf48-207ENST00000596655 ITPRIPQ8IWB1 547 aa24.32■■□□□ 1.48
C19orf48-207ENST00000596655 YBX3P16989 372 aaKnown RBP eCLIP24.32■■□□□ 1.48not detected■□□□□ 10.4
C19orf48-207ENST00000596655 YY1P25490 414 aa24.32■■□□□ 1.48
C19orf48-207ENST00000596655 PIP4K2AP48426 406 aaPredicted RBP24.32■■□□□ 1.48
C19orf48-207ENST00000596655 CHMP4BQ9H444 224 aaKnown RBP24.32■■□□□ 1.48
C19orf48-207ENST00000596655 PXDNLA1KZ92 1463 aa24.31■■□□□ 1.48
C19orf48-207ENST00000596655 TM4SF1P30408 202 aa24.31■■□□□ 1.48
C19orf48-207ENST00000596655 POLRMTO00411 1230 aaKnown RBP24.3■■□□□ 1.48
C19orf48-207ENST00000596655 EIF4A1P60842 406 aaKnown RBP24.3■■□□□ 1.48
C19orf48-207ENST00000596655 BABAM1Q9NWV8 329 aa24.3■■□□□ 1.48
C19orf48-207ENST00000596655 NRXN2Q9P2S2 1712 aa24.29■■□□□ 1.48
C19orf48-207ENST00000596655 NFIXQ14938 502 aa24.29■■□□□ 1.48
C19orf48-207ENST00000596655 FAM161AQ3B820 660 aa24.29■■□□□ 1.48
C19orf48-207ENST00000596655 API5Q9BZZ5 524 aaKnown RBP24.29■■□□□ 1.48
C19orf48-207ENST00000596655 TBC1D2BQ9UPU7 963 aa24.29■■□□□ 1.48
C19orf48-207ENST00000596655 NPM2Q86SE8 214 aaKnown RBP24.28■■□□□ 1.48
C19orf48-207ENST00000596655 TSPYL4Q9UJ04 414 aa24.28■■□□□ 1.48
C19orf48-207ENST00000596655 WWC3Q9ULE0 1092 aa24.28■■□□□ 1.48
C19orf48-207ENST00000596655 BRCA1P38398 1863 aaKnown RBP24.28■■□□□ 1.48
C19orf48-207ENST00000596655 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
C19orf48-207ENST00000596655 ANP32AP39687 249 aaKnown RBP24.28■■□□□ 1.48
C19orf48-207ENST00000596655 ELL2O00472 640 aaPredicted RBP24.27■■□□□ 1.48
C19orf48-207ENST00000596655 C8orf34Q49A92 452 aa24.27■■□□□ 1.48
C19orf48-207ENST00000596655 NBPF26B4DH59 902 aa24.26■■□□□ 1.47
C19orf48-207ENST00000596655 NBPF10Q6P3W6 841 aaKnown RBP24.26■■□□□ 1.47
C19orf48-207ENST00000596655 NBPF15Q8N660 670 aa24.26■■□□□ 1.47
C19orf48-207ENST00000596655 ZBTB7BO15156 539 aaPredicted RBP24.25■■□□□ 1.47
C19orf48-207ENST00000596655 TGFB2P61812 414 aa24.25■■□□□ 1.47
C19orf48-207ENST00000596655 DZIP3Q86Y13 1208 aaKnown RBP24.25■■□□□ 1.47
C19orf48-207ENST00000596655 RGS3P49796 1198 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 SMC5Q8IY18 1101 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 CACNA1FO60840 1977 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 A0A0G2JLW4 131 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 BICDL1Q6ZP65 573 aa24.24■■□□□ 1.47
C19orf48-207ENST00000596655 TBC1D9BQ66K14 1250 aa24.23■■□□□ 1.47
C19orf48-207ENST00000596655 PDZRN3Q9UPQ7 1066 aa24.23■■□□□ 1.47
C19orf48-207ENST00000596655 PTPRCP08575 1304 aa24.23■■□□□ 1.47
C19orf48-207ENST00000596655 DPEP1P16444 411 aa24.22■■□□□ 1.47
C19orf48-207ENST00000596655 IPO9Q96P70 1041 aaKnown RBP24.22■■□□□ 1.47
C19orf48-207ENST00000596655 SERPINB2P05120 415 aa24.21■■□□□ 1.47
C19orf48-207ENST00000596655 KRT24Q2M2I5 525 aa24.21■■□□□ 1.47
C19orf48-207ENST00000596655 INTS3Q68E01 1043 aaKnown RBP24.21■■□□□ 1.47
C19orf48-207ENST00000596655 ANKRD31Q8N7Z5 1873 aa24.19■■□□□ 1.46
C19orf48-207ENST00000596655 ARFGEF1Q9Y6D6 1849 aa24.18■■□□□ 1.46
C19orf48-207ENST00000596655 DLEC1Q9Y238 1755 aa24.18■■□□□ 1.46
C19orf48-207ENST00000596655 CARMIL3Q8ND23 1372 aa24.18■■□□□ 1.46
C19orf48-207ENST00000596655 NUP98P52948 1817 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms