RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 IL16Q14005 1332 aa26.99■■□□□ 1.91
SH2D3A-204ENST00000595681 KIF13BQ9NQT8 1826 aa26.99■■□□□ 1.91
SH2D3A-204ENST00000595681 PELP1Q8IZL8 1130 aaKnown RBP26.99■■□□□ 1.91
SH2D3A-204ENST00000595681 A0A0G2JLW4 131 aa26.98■■□□□ 1.91
SH2D3A-204ENST00000595681 WDR63Q8IWG1 891 aa26.98■■□□□ 1.91
SH2D3A-204ENST00000595681 ZBTB3Q9H5J0 574 aa26.98■■□□□ 1.91
SH2D3A-204ENST00000595681 MAP3K15Q6ZN16 1313 aa26.98■■□□□ 1.91
SH2D3A-204ENST00000595681 CARMIL3Q8ND23 1372 aa26.98■■□□□ 1.91
SH2D3A-204ENST00000595681 YBX3P16989 372 aaKnown RBP eCLIP26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 CLEC4GQ6UXB4 293 aa26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 KIAA1551Q9HCM1 1747 aa26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 AFDNP55196 1824 aaKnown RBP26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 NRXN2Q9P2S2 1712 aa26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 GPR162Q16538 588 aa26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 CCDC24Q8N4L8 307 aa26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 SETDB2Q96T68 719 aa26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 DDX21Q9NR30 783 aaKnown RBP eCLIP26.97■■□□□ 1.91
SH2D3A-204ENST00000595681 KIF6Q6ZMV9 814 aa26.96■■□□□ 1.91
SH2D3A-204ENST00000595681 ZNF652Q9Y2D9 606 aa26.96■■□□□ 1.91
SH2D3A-204ENST00000595681 FANCIQ9NVI1 1328 aa26.96■■□□□ 1.91
SH2D3A-204ENST00000595681 DPEP1P16444 411 aa26.95■■□□□ 1.9
SH2D3A-204ENST00000595681 XAGE3Q8WTP9 111 aa26.95■■□□□ 1.9
SH2D3A-204ENST00000595681 ERVV-1B6SEH8 477 aa26.94■■□□□ 1.9
SH2D3A-204ENST00000595681 TGFB2P61812 414 aa26.94■■□□□ 1.9
SH2D3A-204ENST00000595681 AIMP1Q12904 312 aaKnown RBP26.94■■□□□ 1.9
SH2D3A-204ENST00000595681 COPS6Q7L5N1 327 aa26.94■■□□□ 1.9
SH2D3A-204ENST00000595681 ZNF521Q96K83 1311 aa26.94■■□□□ 1.9
SH2D3A-204ENST00000595681 NIP7Q9Y221 180 aaKnown RBP eCLIP26.94■■□□□ 1.9
SH2D3A-204ENST00000595681 DCAF8L1A6NGE4 600 aa26.93■■□□□ 1.9
SH2D3A-204ENST00000595681 KCNA3P22001 575 aa26.93■■□□□ 1.9
SH2D3A-204ENST00000595681 PRR5LQ6MZQ0 368 aa26.93■■□□□ 1.9
SH2D3A-204ENST00000595681 N4BP2Q86UW6 1770 aaPredicted RBP26.93■■□□□ 1.9
SH2D3A-204ENST00000595681 RGL2O15211 777 aa26.92■■□□□ 1.9
SH2D3A-204ENST00000595681 CHRNA5P30532 468 aa26.92■■□□□ 1.9
SH2D3A-204ENST00000595681 DBF4Q9UBU7 674 aaPredicted RBP26.92■■□□□ 1.9
SH2D3A-204ENST00000595681 FAM177BA6PVY3 158 aa26.9■■□□□ 1.9
SH2D3A-204ENST00000595681 TCERG1O14776 1098 aaKnown RBP26.89■■□□□ 1.9
SH2D3A-204ENST00000595681 GPTP24298 496 aa26.89■■□□□ 1.9
SH2D3A-204ENST00000595681 NUP98P52948 1817 aa26.89■■□□□ 1.9
SH2D3A-204ENST00000595681 GIGYF2Q6Y7W6 1299 aaKnown RBP26.89■■□□□ 1.89
SH2D3A-204ENST00000595681 CNBD1Q8NA66 436 aa26.89■■□□□ 1.89
SH2D3A-204ENST00000595681 UBN2Q6ZU65 1347 aa26.88■■□□□ 1.89
SH2D3A-204ENST00000595681 EXOSC9Q06265 439 aaKnown RBP26.88■■□□□ 1.89
SH2D3A-204ENST00000595681 TWISTNBQ3B726 338 aaPredicted RBP26.88■■□□□ 1.89
SH2D3A-204ENST00000595681 NBPF5PQ86XG9 351 aaPredicted RBP26.88■■□□□ 1.89
SH2D3A-204ENST00000595681 ATP10DQ9P241 1426 aa26.88■■□□□ 1.89
SH2D3A-204ENST00000595681 GOLGA2Q08379 1002 aa26.86■■□□□ 1.89
SH2D3A-204ENST00000595681 PHAXQ9H814 394 aaKnown RBP26.86■■□□□ 1.89
SH2D3A-204ENST00000595681 ZNF34Q8IZ26 560 aa26.86■■□□□ 1.89
SH2D3A-204ENST00000595681 HYPKQ9NX55 129 aa26.86■■□□□ 1.89
SH2D3A-204ENST00000595681 MYH16Q9H6N6 1097 aa26.85■■□□□ 1.89
SH2D3A-204ENST00000595681 ANKRD31Q8N7Z5 1873 aa26.85■■□□□ 1.89
SH2D3A-204ENST00000595681 NPHP1O15259 732 aa26.84■■□□□ 1.89
SH2D3A-204ENST00000595681 BRIP1Q9BX63 1249 aa26.84■■□□□ 1.89
SH2D3A-204ENST00000595681 CCDC30Q5VVM6 783 aa26.84■■□□□ 1.89
SH2D3A-204ENST00000595681 CDCA7LQ96GN5 454 aa26.84■■□□□ 1.89
SH2D3A-204ENST00000595681 BCS1LQ9Y276 419 aa26.84■■□□□ 1.89
SH2D3A-204ENST00000595681 SUSD4Q5VX71 490 aa26.83■■□□□ 1.89
SH2D3A-204ENST00000595681 C2CD5Q86YS7 1000 aa26.83■■□□□ 1.89
SH2D3A-204ENST00000595681 NUTM1Q86Y26 1132 aa26.82■■□□□ 1.88
SH2D3A-204ENST00000595681 VAMP4O75379 141 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 ST5P78524 1137 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 TPTE2Q6XPS3 522 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 ANKRD13DQ6ZTN6 518 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 ZNF428Q96B54 188 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 PIM2Q9P1W9 311 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 BRCA1P38398 1863 aaKnown RBP26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 PLBD2Q8NHP8 589 aa26.81■■□□□ 1.88
SH2D3A-204ENST00000595681 ABCC12Q96J65 1359 aa26.8■■□□□ 1.88
SH2D3A-204ENST00000595681 GRIN3BO60391 1043 aa26.79■■□□□ 1.88
SH2D3A-204ENST00000595681 TCIRG1Q13488 830 aa26.79■■□□□ 1.88
SH2D3A-204ENST00000595681 ERFEQ4G0M1 354 aa26.79■■□□□ 1.88
SH2D3A-204ENST00000595681 H0YIN7 160 aa26.78■■□□□ 1.88
SH2D3A-204ENST00000595681 NTSR2O95665 410 aa26.78■■□□□ 1.88
SH2D3A-204ENST00000595681 PDE6BP35913 854 aa26.78■■□□□ 1.88
SH2D3A-204ENST00000595681 HNRNPUQ00839 825 aaKnown RBP eCLIP26.78■■□□□ 1.88
SH2D3A-204ENST00000595681 SLFN5Q08AF3 891 aa26.78■■□□□ 1.88
SH2D3A-204ENST00000595681 COL11A2P13942 1736 aaPredicted RBP26.77■■□□□ 1.88
SH2D3A-204ENST00000595681 E9PSI1 815 aa26.77■■□□□ 1.88
SH2D3A-204ENST00000595681 DALRD3Q5D0E6 543 aaKnown RBP26.77■■□□□ 1.88
SH2D3A-204ENST00000595681 G2E3Q7L622 706 aa26.77■■□□□ 1.88
SH2D3A-204ENST00000595681 NLRP10Q86W26 655 aa26.76■■□□□ 1.88
SH2D3A-204ENST00000595681 STK31Q9BXU1 1019 aa26.76■■□□□ 1.88
SH2D3A-204ENST00000595681 ANKRD36CQ5JPF3 1778 aa26.76■■□□□ 1.87
SH2D3A-204ENST00000595681 GTF2E1P29083 439 aaPredicted RBP26.76■■□□□ 1.87
SH2D3A-204ENST00000595681 NYXQ9GZU5 481 aa26.76■■□□□ 1.87
SH2D3A-204ENST00000595681 ATP5J2-PTCD1G3V325 749 aa26.75■■□□□ 1.87
SH2D3A-204ENST00000595681 SLC4A2P04920 1241 aa26.75■■□□□ 1.87
SH2D3A-204ENST00000595681 PARP10Q53GL7 1025 aa26.75■■□□□ 1.87
SH2D3A-204ENST00000595681 HSP90AB3PQ58FF7 597 aa26.75■■□□□ 1.87
SH2D3A-204ENST00000595681 ARFGEF2Q9Y6D5 1785 aa26.75■■□□□ 1.87
SH2D3A-204ENST00000595681 SRGNP10124 158 aa26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 RIC3Q7Z5B4 369 aa26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 ZNF622Q969S3 477 aaKnown RBP eCLIP26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 CHMP4AQ9BY43 222 aa26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 IBTKQ9P2D0 1353 aaPredicted RBP26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 DLEC1Q9Y238 1755 aa26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 TNRC6CQ9HCJ0 1690 aaKnown RBP26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 YY1P25490 414 aa26.74■■□□□ 1.87
SH2D3A-204ENST00000595681 SYNE4Q8N205 404 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms