RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 RIPK4P57078 832 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 NBPF10Q6P3W6 841 aaKnown RBP24.29■■□□□ 1.48
IRF3-209ENST00000595034 KIF6Q6ZMV9 814 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 CCDC24Q8N4L8 307 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 NBPF15Q8N660 670 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 NMRK2Q9NPI5 230 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 BCORQ6W2J9 1755 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 EIF4A1P60842 406 aaKnown RBP24.28■■□□□ 1.48
IRF3-209ENST00000595034 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
IRF3-209ENST00000595034 TSPYL4Q9UJ04 414 aa24.28■■□□□ 1.48
IRF3-209ENST00000595034 THUMPD2Q9BTF0 503 aaKnown RBP24.27■■□□□ 1.48
IRF3-209ENST00000595034 C21orf2O43822 256 aa24.26■■□□□ 1.47
IRF3-209ENST00000595034 RBM46Q8TBY0 533 aaKnown RBP24.26■■□□□ 1.47
IRF3-209ENST00000595034 BABAM1Q9NWV8 329 aa24.26■■□□□ 1.47
IRF3-209ENST00000595034 RRP7AQ9Y3A4 280 aaKnown RBP24.26■■□□□ 1.47
IRF3-209ENST00000595034 LAMB4A4D0S4 1761 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 ERVV-1B6SEH8 477 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 SRGNP10124 158 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 APLP1P51693 650 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 NYXQ9GZU5 481 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 ZNF219Q9P2Y4 722 aaPredicted RBP24.25■■□□□ 1.47
IRF3-209ENST00000595034 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
IRF3-209ENST00000595034 DPY19L2Q6NUT2 758 aa24.24■■□□□ 1.47
IRF3-209ENST00000595034 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
IRF3-209ENST00000595034 NPR1P16066 1061 aa24.23■■□□□ 1.47
IRF3-209ENST00000595034 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
IRF3-209ENST00000595034 RRAGCQ9HB90 399 aa24.23■■□□□ 1.47
IRF3-209ENST00000595034 KDM3BQ7LBC6 1761 aa24.23■■□□□ 1.47
IRF3-209ENST00000595034 FAM177BA6PVY3 158 aa24.22■■□□□ 1.47
IRF3-209ENST00000595034 MYL6BP14649 208 aa24.22■■□□□ 1.47
IRF3-209ENST00000595034 TMPOP42166 694 aaKnown RBP24.22■■□□□ 1.47
IRF3-209ENST00000595034 TAOK3Q9H2K8 898 aa24.22■■□□□ 1.47
IRF3-209ENST00000595034 MAP3K15Q6ZN16 1313 aa24.21■■□□□ 1.47
IRF3-209ENST00000595034 GLTPD2A6NH11 291 aa24.21■■□□□ 1.47
IRF3-209ENST00000595034 NFKBIEO00221 500 aa24.21■■□□□ 1.47
IRF3-209ENST00000595034 FSTL1Q12841 308 aa24.21■■□□□ 1.47
IRF3-209ENST00000595034 ANKRD31Q8N7Z5 1873 aa24.21■■□□□ 1.47
IRF3-209ENST00000595034 LTBP3Q9NS15 1303 aa24.2■■□□□ 1.46
IRF3-209ENST00000595034 ERFEQ4G0M1 354 aa24.2■■□□□ 1.46
IRF3-209ENST00000595034 RUNDC1Q96C34 613 aa24.2■■□□□ 1.46
IRF3-209ENST00000595034 ALDH1B1P30837 517 aa24.19■■□□□ 1.46
IRF3-209ENST00000595034 HLFQ16534 295 aa24.19■■□□□ 1.46
IRF3-209ENST00000595034 TNRC6CQ9HCJ0 1690 aaKnown RBP24.18■■□□□ 1.46
IRF3-209ENST00000595034 VEGFAP15692 232 aaPredicted RBP24.18■■□□□ 1.46
IRF3-209ENST00000595034 NEUROD2Q15784 382 aa24.18■■□□□ 1.46
IRF3-209ENST00000595034 CCDC93Q567U6 631 aa24.18■■□□□ 1.46
IRF3-209ENST00000595034 SBF1O95248 1867 aa24.17■■□□□ 1.46
IRF3-209ENST00000595034 COL11A2P13942 1736 aaPredicted RBP24.17■■□□□ 1.46
IRF3-209ENST00000595034 KLRG2A4D1S0 409 aaPredicted RBP24.16■■□□□ 1.46
IRF3-209ENST00000595034 EIF2S2P20042 333 aaKnown RBP24.16■■□□□ 1.46
IRF3-209ENST00000595034 CCDC146Q8IYE0 955 aa24.16■■□□□ 1.46
IRF3-209ENST00000595034 SMC1BQ8NDV3 1235 aa24.16■■□□□ 1.46
IRF3-209ENST00000595034 ZBTB3Q9H5J0 574 aa24.16■■□□□ 1.46
IRF3-209ENST00000595034 IBTKQ9P2D0 1353 aaPredicted RBP24.15■■□□□ 1.46
IRF3-209ENST00000595034 TTLL7Q6ZT98 887 aa24.14■■□□□ 1.45
IRF3-209ENST00000595034 PPP1R42Q7Z4L9 355 aa24.14■■□□□ 1.45
IRF3-209ENST00000595034 RTKN2Q8IZC4 609 aa24.14■■□□□ 1.45
IRF3-209ENST00000595034 PRELPP51888 382 aa24.13■■□□□ 1.45
IRF3-209ENST00000595034 GIGYF2Q6Y7W6 1299 aaKnown RBP24.13■■□□□ 1.45
IRF3-209ENST00000595034 RPGRQ92834 1020 aaKnown RBP24.13■■□□□ 1.45
IRF3-209ENST00000595034 LAS1LQ9Y4W2 734 aaKnown RBP24.13■■□□□ 1.45
IRF3-209ENST00000595034 GPTP24298 496 aa24.12■■□□□ 1.45
IRF3-209ENST00000595034 PARP10Q53GL7 1025 aa24.12■■□□□ 1.45
IRF3-209ENST00000595034 TIAM2Q8IVF5 1701 aa24.12■■□□□ 1.45
IRF3-209ENST00000595034 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
IRF3-209ENST00000595034 FKBP4Q02790 459 aaKnown RBP eCLIP24.1■■□□□ 1.45
IRF3-209ENST00000595034 HSP90AB3PQ58FF7 597 aa24.1■■□□□ 1.45
IRF3-209ENST00000595034 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
IRF3-209ENST00000595034 TMX4Q9H1E5 349 aaPredicted RBP24.1■■□□□ 1.45
IRF3-209ENST00000595034 ADAMTS8Q9UP79 889 aa24.1■■□□□ 1.45
IRF3-209ENST00000595034 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
IRF3-209ENST00000595034 GRIPAP1Q4V328 841 aa24.09■■□□□ 1.45
IRF3-209ENST00000595034 CC2D2BQ6DHV5 1058 aa24.09■■□□□ 1.45
IRF3-209ENST00000595034 ZNF34Q8IZ26 560 aa24.09■■□□□ 1.45
IRF3-209ENST00000595034 CHL1O00533 1208 aa24.08■■□□□ 1.45
IRF3-209ENST00000595034 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
IRF3-209ENST00000595034 RBM17Q96I25 401 aaKnown RBP24.08■■□□□ 1.45
IRF3-209ENST00000595034 FER1L6Q2WGJ9 1857 aa24.08■■□□□ 1.45
IRF3-209ENST00000595034 RIC1Q4ADV7 1423 aa24.08■■□□□ 1.44
IRF3-209ENST00000595034 SLX4Q8IY92 1834 aa24.07■■□□□ 1.44
IRF3-209ENST00000595034 CALD1Q05682 793 aaKnown RBP24.07■■□□□ 1.44
IRF3-209ENST00000595034 CRY2Q49AN0 593 aa24.07■■□□□ 1.44
IRF3-209ENST00000595034 SUSD4Q5VX71 490 aa24.07■■□□□ 1.44
IRF3-209ENST00000595034 HOXB7P09629 217 aa24.06■■□□□ 1.44
IRF3-209ENST00000595034 NLRP3Q96P20 1036 aa24.06■■□□□ 1.44
IRF3-209ENST00000595034 UTP14AQ9BVJ6 771 aaKnown RBP24.06■■□□□ 1.44
IRF3-209ENST00000595034 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
IRF3-209ENST00000595034 UBN2Q6ZU65 1347 aa24.06■■□□□ 1.44
IRF3-209ENST00000595034 ABCC12Q96J65 1359 aa24.05■■□□□ 1.44
IRF3-209ENST00000595034 IQCA1LA6NCM1 817 aa24.05■■□□□ 1.44
IRF3-209ENST00000595034 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
IRF3-209ENST00000595034 AIMP1Q12904 312 aaKnown RBP24.05■■□□□ 1.44
IRF3-209ENST00000595034 PDIA6Q15084 440 aa24.05■■□□□ 1.44
IRF3-209ENST00000595034 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
IRF3-209ENST00000595034 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
IRF3-209ENST00000595034 TRIM35Q9UPQ4 493 aa24.05■■□□□ 1.44
IRF3-209ENST00000595034 CACNA1SQ13698 1873 aa24.04■■□□□ 1.44
IRF3-209ENST00000595034 COPS6Q7L5N1 327 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms