RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ARHGAP27Q6ZUM4 889 aa22.6■■□□□ 1.21
IRF3-208ENST00000594387 ZNF784Q8NCA9 323 aaPredicted RBP22.6■■□□□ 1.21
IRF3-208ENST00000594387 DLEC1Q9Y238 1755 aa22.6■■□□□ 1.21
IRF3-208ENST00000594387 NBPF5PQ86XG9 351 aaPredicted RBP22.59■■□□□ 1.21
IRF3-208ENST00000594387 C2CD5Q86YS7 1000 aa22.59■■□□□ 1.21
IRF3-208ENST00000594387 CFAP44Q96MT7 982 aa22.59■■□□□ 1.21
IRF3-208ENST00000594387 NIP7Q9Y221 180 aaKnown RBP eCLIP22.59■■□□□ 1.21
IRF3-208ENST00000594387 ERVV-1B6SEH8 477 aa22.58■■□□□ 1.21
IRF3-208ENST00000594387 KCNA3P22001 575 aa22.58■■□□□ 1.21
IRF3-208ENST00000594387 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.21
IRF3-208ENST00000594387 GNAI1P63096 354 aa22.58■■□□□ 1.21
IRF3-208ENST00000594387 TPTE2Q6XPS3 522 aa22.58■■□□□ 1.21
IRF3-208ENST00000594387 BRIP1Q9BX63 1249 aa22.58■■□□□ 1.21
IRF3-208ENST00000594387 ANKRD31Q8N7Z5 1873 aa22.58■■□□□ 1.2
IRF3-208ENST00000594387 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
IRF3-208ENST00000594387 PRR5LQ6MZQ0 368 aa22.57■■□□□ 1.2
IRF3-208ENST00000594387 MAP3K15Q6ZN16 1313 aa22.56■■□□□ 1.2
IRF3-208ENST00000594387 TTLL6Q8N841 843 aa22.55■■□□□ 1.2
IRF3-208ENST00000594387 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.2
IRF3-208ENST00000594387 CACNA1SQ13698 1873 aa22.55■■□□□ 1.2
IRF3-208ENST00000594387 NECTIN2Q92692 538 aa22.54■■□□□ 1.2
IRF3-208ENST00000594387 IFT57Q9NWB7 429 aa22.54■■□□□ 1.2
IRF3-208ENST00000594387 FAM177BA6PVY3 158 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 HOXB7P09629 217 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 HLFQ16534 295 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 CCDC24Q8N4L8 307 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 ZBTB3Q9H5J0 574 aa22.53■■□□□ 1.2
IRF3-208ENST00000594387 TTLL7Q6ZT98 887 aa22.52■■□□□ 1.2
IRF3-208ENST00000594387 MBIPQ9NS73 344 aa22.52■■□□□ 1.2
IRF3-208ENST00000594387 CCDC88AQ3V6T2 1871 aa22.51■■□□□ 1.19
IRF3-208ENST00000594387 HDGFL1Q5TGJ6 251 aa22.51■■□□□ 1.19
IRF3-208ENST00000594387 SBF1O95248 1867 aa22.5■■□□□ 1.19
IRF3-208ENST00000594387 CNKSR1Q969H4 720 aa22.5■■□□□ 1.19
IRF3-208ENST00000594387 DDX21Q9NR30 783 aaKnown RBP eCLIP22.5■■□□□ 1.19
IRF3-208ENST00000594387 AIMP1Q12904 312 aaKnown RBP22.49■■□□□ 1.19
IRF3-208ENST00000594387 DUSP27Q5VZP5 1158 aa22.49■■□□□ 1.19
IRF3-208ENST00000594387 GIGYF2Q6Y7W6 1299 aaKnown RBP22.49■■□□□ 1.19
IRF3-208ENST00000594387 DBF4Q9UBU7 674 aaPredicted RBP22.49■■□□□ 1.19
IRF3-208ENST00000594387 ANKRD36CQ5JPF3 1778 aa22.48■■□□□ 1.19
IRF3-208ENST00000594387 ZNF853P0CG23 659 aa22.48■■□□□ 1.19
IRF3-208ENST00000594387 KRT24Q2M2I5 525 aa22.48■■□□□ 1.19
IRF3-208ENST00000594387 HSP90AB3PQ58FF7 597 aa22.48■■□□□ 1.19
IRF3-208ENST00000594387 PPP1R42Q7Z4L9 355 aa22.48■■□□□ 1.19
IRF3-208ENST00000594387 MASTLQ96GX5 879 aa22.48■■□□□ 1.19
IRF3-208ENST00000594387 ANXA1P04083 346 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 PDIA6Q15084 440 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 STYK1Q6J9G0 422 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 FAM9BQ8IZU0 186 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 GPBP1L1Q9HC44 474 aaPredicted RBP22.47■■□□□ 1.19
IRF3-208ENST00000594387 COL11A2P13942 1736 aaPredicted RBP22.47■■□□□ 1.19
IRF3-208ENST00000594387 ATP10DQ9P241 1426 aa22.47■■□□□ 1.19
IRF3-208ENST00000594387 ARFGEF2Q9Y6D5 1785 aa22.46■■□□□ 1.19
IRF3-208ENST00000594387 GPTP24298 496 aa22.46■■□□□ 1.19
IRF3-208ENST00000594387 XAGE3Q8WTP9 111 aa22.46■■□□□ 1.19
IRF3-208ENST00000594387 CHPF2Q9P2E5 772 aa22.46■■□□□ 1.19
IRF3-208ENST00000594387 SRGNP10124 158 aa22.45■■□□□ 1.18
IRF3-208ENST00000594387 PROSER3Q2NL68 480 aa22.45■■□□□ 1.18
IRF3-208ENST00000594387 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
IRF3-208ENST00000594387 PARP10Q53GL7 1025 aa22.45■■□□□ 1.18
IRF3-208ENST00000594387 HYPKQ9NX55 129 aa22.45■■□□□ 1.18
IRF3-208ENST00000594387 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
IRF3-208ENST00000594387 NPR1P16066 1061 aa22.44■■□□□ 1.18
IRF3-208ENST00000594387 WWC1Q8IX03 1113 aa22.44■■□□□ 1.18
IRF3-208ENST00000594387 ZNF34Q8IZ26 560 aa22.44■■□□□ 1.18
IRF3-208ENST00000594387 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
IRF3-208ENST00000594387 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
IRF3-208ENST00000594387 C9orf131Q5VYM1 1079 aa22.43■■□□□ 1.18
IRF3-208ENST00000594387 ZNF526Q8TF50 670 aaPredicted RBP22.43■■□□□ 1.18
IRF3-208ENST00000594387 ZNF219Q9P2Y4 722 aaPredicted RBP22.43■■□□□ 1.18
IRF3-208ENST00000594387 SLX4Q8IY92 1834 aa22.43■■□□□ 1.18
IRF3-208ENST00000594387 ALDH1B1P30837 517 aa22.42■■□□□ 1.18
IRF3-208ENST00000594387 RNF181Q9P0P0 153 aa22.42■■□□□ 1.18
IRF3-208ENST00000594387 SALL2Q9Y467 1007 aaPredicted RBP22.42■■□□□ 1.18
IRF3-208ENST00000594387 ADCY9O60503 1353 aa22.41■■□□□ 1.18
IRF3-208ENST00000594387 IBTKQ9P2D0 1353 aaPredicted RBP22.41■■□□□ 1.18
IRF3-208ENST00000594387 C21orf2O43822 256 aa22.41■■□□□ 1.18
IRF3-208ENST00000594387 SUSD4Q5VX71 490 aa22.41■■□□□ 1.18
IRF3-208ENST00000594387 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
IRF3-208ENST00000594387 LRP10Q7Z4F1 713 aa22.41■■□□□ 1.18
IRF3-208ENST00000594387 NUTM1Q86Y26 1132 aa22.41■■□□□ 1.18
IRF3-208ENST00000594387 UTP14AQ9BVJ6 771 aaKnown RBP22.41■■□□□ 1.18
IRF3-208ENST00000594387 ERFEQ4G0M1 354 aa22.4■■□□□ 1.18
IRF3-208ENST00000594387 CCDC30Q5VVM6 783 aa22.4■■□□□ 1.18
IRF3-208ENST00000594387 PLBD2Q8NHP8 589 aa22.4■■□□□ 1.18
IRF3-208ENST00000594387 FER1L6Q2WGJ9 1857 aa22.4■■□□□ 1.18
IRF3-208ENST00000594387 CACNA1FO60840 1977 aa22.39■■□□□ 1.18
IRF3-208ENST00000594387 IL16Q14005 1332 aa22.39■■□□□ 1.18
IRF3-208ENST00000594387 TCIRG1Q13488 830 aa22.39■■□□□ 1.17
IRF3-208ENST00000594387 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.17
IRF3-208ENST00000594387 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.17
IRF3-208ENST00000594387 DICER1Q9UPY3 1922 aaKnown RBP22.39■■□□□ 1.17
IRF3-208ENST00000594387 UBN2Q6ZU65 1347 aa22.38■■□□□ 1.17
IRF3-208ENST00000594387 KLRG2A4D1S0 409 aaPredicted RBP22.38■■□□□ 1.17
IRF3-208ENST00000594387 LMNB1P20700 586 aa22.38■■□□□ 1.17
IRF3-208ENST00000594387 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
IRF3-208ENST00000594387 GOLGA2Q08379 1002 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms