RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-215	ENST00000593098	EGFL7	Q9UHF1	273 aa		3.4	□□□□□ -1.86
PIK3C3-215	ENST00000593098	PHLPP1	O60346	1717 aa		3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	XRN1	Q8IZH2	1706 aa	Known RBP	3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TNFRSF10B	O14763	440 aa		3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SLC19A1	P41440	591 aa		3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	FOXD4L5	Q5VV16	416 aa	Predicted RBP	3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ZDHHC1	Q8WTX9	485 aa		3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	KCTD15	Q96SI1	283 aa	Predicted RBP	3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	IQGAP3	Q86VI3	1631 aa		3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NCOA3	Q9Y6Q9	1424 aa		3.4	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ATP5J2-PTCD1	G3V325	749 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SHANK2	Q9UPX8	1470 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	RGPD1	P0DJD0	1748 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	GRN	P28799	593 aa	Known RBP	3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NEXMIF	Q5QGS0	1516 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	UHRF1BP1	Q6BDS2	1440 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	DISP3	Q9P2K9	1392 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SOS2	Q07890	1332 aa	Predicted RBP	3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NWD2	Q9ULI1	1742 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	CDK2AP1	O14519	115 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	GNRH1	P01148	92 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	INHA	P05111	366 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PRM3	Q9NNZ6	103 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ZNF358	Q9NW07	568 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ZNF518A	Q6AHZ1	1483 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PLCH2	O75038	1416 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	FAM135B	Q49AJ0	1406 aa		3.39	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NRAP	Q86VF7	1730 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	GPC1	P35052	558 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NCOA4	Q13772	614 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	HOMEZ	Q8IX15	550 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	MYO19	Q96H55	970 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PURB	Q96QR8	312 aa	Known RBP	3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ETNK1	Q9HBU6	452 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	RGS17	Q9UGC6	210 aa	Predicted RBP	3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	LDLRAD1	Q5T700	205 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ZNF784	Q8NCA9	323 aa	Predicted RBP	3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PNMA1	Q8ND90	353 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	C2orf49	Q9BVC5	232 aa	Predicted RBP	3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	VRTN	Q9H8Y1	702 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NDFIP2	Q9NV92	336 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	CXXC1	Q9P0U4	656 aa	Predicted RBP	3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	WNK3	Q9BYP7	1800 aa		3.38	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NUP188	Q5SRE5	1749 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	RAD21	O60216	631 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	WDR44	Q5JSH3	913 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ANKMY2	Q8IV38	441 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	MEIOB	Q8N635	442 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	GAS2L2	Q8NHY3	880 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	CALR3	Q96L12	384 aa	Known RBP	3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	DNAAF2	Q9NVR5	837 aa	Known RBP	3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	LMTK2	Q8IWU2	1503 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	IGFBP4	P22692	258 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SEMA3F	Q13275	785 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TEAD4	Q15561	434 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	USP3	Q9Y6I4	520 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	BRWD3	Q6RI45	1802 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PZP	P20742	1482 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NKTR	P30414	1462 aa	Known RBP	3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ARHGAP4	P98171	946 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TRIM26	Q12899	539 aa	Predicted RBP	3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	RNF20	Q5VTR2	975 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	CC2D2B	Q6DHV5	1058 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SCHIP1	Q9P0W5	487 aa	Predicted RBP	3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NOVA2	Q9UNW9	492 aa	Known RBP	3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TLL2	Q9Y6L7	1015 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NLRP1	Q9C000	1473 aa		3.37	□□□□□ -1.87
PIK3C3-215	ENST00000593098	RNF40	O75150	1001 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	CD2BP2	O95400	341 aa	Known RBP	3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	KLRG1	Q96E93	195 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	BCS1L	Q9Y276	419 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NALCN	Q8IZF0	1738 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SENP3-EIF4A1	A0A087X0R7	540 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098		J3QL48	77 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	NRG2	O14511	850 aa	Predicted RBP	3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	MYT1	Q01538	1121 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TRIM46	Q7Z4K8	759 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	QTRT2	Q9H974	415 aa	Known RBP	3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ARHGEF5	Q12774	1597 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TM4SF5	O14894	197 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	MKRN1	Q9UHC7	482 aa	Known RBP	3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ADGRB3	O60242	1522 aa		3.36	□□□□□ -1.87
PIK3C3-215	ENST00000593098	THSD7A	Q9UPZ6	1657 aa		3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	HPS1	Q92902	700 aa		3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	TMPRSS4	Q9NRS4	437 aa		3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SPINT1	O43278	529 aa		3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	HOXD8	P13378	290 aa	Predicted RBP	3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PPARGC1B	Q86YN6	1023 aa	Known RBP	3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	GPC6	Q9Y625	555 aa	Predicted RBP	3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	PRDM15	P57071	1507 aa	Predicted RBP	3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	KIF27	Q86VH2	1401 aa		3.35	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ADH1A	P07327	375 aa		3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	SMTN	P53814	917 aa		3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	EML3	Q32P44	896 aa		3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	ZNF697	Q5TEC3	545 aa		3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	DGAT1	O75907	488 aa		3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	LMOD1	P29536	600 aa	Predicted RBP	3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	CLN3	Q13286	438 aa		3.34	□□□□□ -1.87
PIK3C3-215	ENST00000593098	LINC01559	Q495D7	138 aa		3.34	□□□□□ -1.87

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