RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 GNAT3A8MTJ3 354 aa21.46■■□□□ 1.03
SPC24-206ENST00000592540 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
SPC24-206ENST00000592540 DTNBO60941 627 aa21.46■■□□□ 1.03
SPC24-206ENST00000592540 ZSCAN31Q96LW9 406 aaPredicted RBP21.46■■□□□ 1.03
SPC24-206ENST00000592540 AGLP35573 1532 aa21.46■■□□□ 1.03
SPC24-206ENST00000592540 SH2B1Q9NRF2 756 aaPredicted RBP21.46■■□□□ 1.03
SPC24-206ENST00000592540 VPS37CA5D8V6 355 aaPredicted RBP21.45■■□□□ 1.02
SPC24-206ENST00000592540 ANKRD7Q92527 254 aa21.45■■□□□ 1.02
SPC24-206ENST00000592540 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.02
SPC24-206ENST00000592540 ADCK5Q3MIX3 580 aa21.45■■□□□ 1.02
SPC24-206ENST00000592540 FAM200AQ8TCP9 573 aa21.45■■□□□ 1.02
SPC24-206ENST00000592540 GTPBP4Q9BZE4 634 aaKnown RBP21.45■■□□□ 1.02
SPC24-206ENST00000592540 PHAXQ9H814 394 aaKnown RBP21.45■■□□□ 1.02
SPC24-206ENST00000592540 CTIFO43310 598 aaKnown RBP21.44■■□□□ 1.02
SPC24-206ENST00000592540 PTH1RQ03431 593 aa21.44■■□□□ 1.02
SPC24-206ENST00000592540 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
SPC24-206ENST00000592540 ZSWIM6Q9HCJ5 1215 aa21.44■■□□□ 1.02
SPC24-206ENST00000592540 ST3GAL1Q11201 340 aa21.44■■□□□ 1.02
SPC24-206ENST00000592540 TM6SF1Q9BZW5 370 aa21.44■■□□□ 1.02
SPC24-206ENST00000592540 CYP46A1Q9Y6A2 500 aa21.44■■□□□ 1.02
SPC24-206ENST00000592540 USP42Q9H9J4 1324 aaKnown RBP21.43■■□□□ 1.02
SPC24-206ENST00000592540 CHD2O14647 1828 aaKnown RBP21.43■■□□□ 1.02
SPC24-206ENST00000592540 PTGS1P23219 599 aa21.43■■□□□ 1.02
SPC24-206ENST00000592540 PRPF40BQ6NWY9 871 aaKnown RBP21.43■■□□□ 1.02
SPC24-206ENST00000592540 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
SPC24-206ENST00000592540 RUFY2Q8WXA3 655 aa21.43■■□□□ 1.02
SPC24-206ENST00000592540 TTC41PQ6P2S7 1318 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
SPC24-206ENST00000592540 AMPHP49418 695 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 TAF7Q15545 349 aaPredicted RBP21.42■■□□□ 1.02
SPC24-206ENST00000592540 MAP3K11Q16584 847 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 ME3Q16798 604 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 HDGFL1Q5TGJ6 251 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 TTC6Q86TZ1 520 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 KCNB2Q92953 911 aa21.42■■□□□ 1.02
SPC24-206ENST00000592540 NBPF7P0C2Y1 421 aaPredicted RBP21.41■■□□□ 1.02
SPC24-206ENST00000592540 NUP62CLQ9H1M0 184 aa21.41■■□□□ 1.02
SPC24-206ENST00000592540 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
SPC24-206ENST00000592540 MRVI1Q9Y6F6 885 aa21.41■■□□□ 1.02
SPC24-206ENST00000592540 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
SPC24-206ENST00000592540 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
SPC24-206ENST00000592540 SPDYE4A6NLX3 237 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 KRT85P78386 507 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 TYRO3Q06418 890 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 HSP90AB4PQ58FF6 505 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 NECAB1Q8N987 351 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 LIG1P18858 919 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 ELP1O95163 1332 aa21.4■■□□□ 1.02
SPC24-206ENST00000592540 CAMK4Q16566 473 aa21.39■■□□□ 1.02
SPC24-206ENST00000592540 LARP1BQ659C4 914 aaKnown RBP21.39■■□□□ 1.02
SPC24-206ENST00000592540 LUZP1Q86V48 1076 aa21.39■■□□□ 1.02
SPC24-206ENST00000592540 CHMP3Q9Y3E7 222 aa21.39■■□□□ 1.02
SPC24-206ENST00000592540 MLECQ14165 292 aa21.39■■□□□ 1.01
SPC24-206ENST00000592540 U2AF2P26368 475 aaKnown RBP eCLIP21.38■■□□□ 1.012e-9■□□□□ 10.7
SPC24-206ENST00000592540 NECTIN1Q15223 517 aa21.38■■□□□ 1.01
SPC24-206ENST00000592540 CCDC186Q7Z3E2 898 aa21.38■■□□□ 1.01
SPC24-206ENST00000592540 DDX54Q8TDD1 881 aaKnown RBP21.38■■□□□ 1.01
SPC24-206ENST00000592540 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
SPC24-206ENST00000592540 OS9Q13438 667 aaPredicted RBP21.37■■□□□ 1.01
SPC24-206ENST00000592540 CDC37L1Q7L3B6 337 aa21.37■■□□□ 1.01
SPC24-206ENST00000592540 FERMT3Q86UX7 667 aa21.37■■□□□ 1.01
SPC24-206ENST00000592540 CCDC171Q6TFL3 1326 aa21.37■■□□□ 1.01
SPC24-206ENST00000592540 PDIA4P13667 645 aaKnown RBP21.37■■□□□ 1.01
SPC24-206ENST00000592540 CBX8Q9HC52 389 aa21.37■■□□□ 1.01
SPC24-206ENST00000592540 ZKSCAN1P17029 563 aaPredicted RBP21.36■■□□□ 1.01
SPC24-206ENST00000592540 BEND3Q5T5X7 828 aa21.36■■□□□ 1.01
SPC24-206ENST00000592540 FAM173BQ6P4H8 233 aa21.36■■□□□ 1.01
SPC24-206ENST00000592540 ANO6Q4KMQ2 910 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 CKAP2LQ8IYA6 745 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 TNMDQ9H2S6 317 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 KIF20AO95235 890 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 LRMPQ12912 555 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 CLASRPQ8N2M8 674 aaKnown RBP21.35■■□□□ 1.01
SPC24-206ENST00000592540 ECHDC1Q9NTX5 307 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 DACT1Q9NYF0 836 aa21.35■■□□□ 1.01
SPC24-206ENST00000592540 PTPRUQ92729 1446 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 NCBP1Q09161 790 aaKnown RBP21.34■■□□□ 1.01
SPC24-206ENST00000592540 CREB3L3Q68CJ9 461 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 DRC7Q8IY82 874 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 DNAAF4Q8WXU2 420 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 RBM8AQ9Y5S9 174 aaKnown RBP21.34■■□□□ 1.01
SPC24-206ENST00000592540 NWD1Q149M9 1564 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 ADAMTS13Q76LX8 1427 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
SPC24-206ENST00000592540 PDCP20941 246 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 FEZ1Q99689 392 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 NRBP1Q9UHY1 535 aa21.34■■□□□ 1.01
SPC24-206ENST00000592540 SYCP1Q15431 976 aa21.33■■□□□ 1.01
SPC24-206ENST00000592540 PLA2G4DQ86XP0 818 aa21.33■■□□□ 1.01
SPC24-206ENST00000592540 SCAND2PQ9GZW5 306 aaPredicted RBP21.33■■□□□ 1.01
SPC24-206ENST00000592540 PIK3C2AO00443 1686 aa21.33■■□□□ 1.01
SPC24-206ENST00000592540 PI4KAP2A4QPH2 592 aa21.33■■□□□ 1
SPC24-206ENST00000592540 SMTNL1A8MU46 457 aa21.33■■□□□ 1
SPC24-206ENST00000592540 ZNF75DP51815 510 aa21.33■■□□□ 1
SPC24-206ENST00000592540 RBM43Q6ZSC3 357 aaKnown RBP21.33■■□□□ 1
SPC24-206ENST00000592540 PI4KAP1Q8N8J0 262 aa21.33■■□□□ 1
SPC24-206ENST00000592540 C16orf45Q96MC5 204 aaPredicted RBP21.33■■□□□ 1
SPC24-206ENST00000592540 TRIM5Q9C035 493 aa21.33■■□□□ 1
SPC24-206ENST00000592540 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
SPC24-206ENST00000592540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms