RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 ANTXR1Q9H6X2 564 aa16.83■□□□□ 0.28
GFAP-221ENST00000592065 HEG1Q9ULI3 1381 aa16.83■□□□□ 0.28
GFAP-221ENST00000592065 CCDC87Q9NVE4 849 aa16.83■□□□□ 0.28
GFAP-221ENST00000592065 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
GFAP-221ENST00000592065 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
GFAP-221ENST00000592065 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
GFAP-221ENST00000592065 POLD1P28340 1107 aa16.81■□□□□ 0.28
GFAP-221ENST00000592065 RFC4P35249 363 aa16.81■□□□□ 0.28
GFAP-221ENST00000592065 UPF2Q9HAU5 1272 aaKnown RBP16.81■□□□□ 0.28
GFAP-221ENST00000592065 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
GFAP-221ENST00000592065 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
GFAP-221ENST00000592065 GYS1P13807 737 aa16.8■□□□□ 0.28
GFAP-221ENST00000592065 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
GFAP-221ENST00000592065 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
GFAP-221ENST00000592065 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
GFAP-221ENST00000592065 MMP10P09238 476 aa16.8■□□□□ 0.28
GFAP-221ENST00000592065 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
GFAP-221ENST00000592065 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
GFAP-221ENST00000592065 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
GFAP-221ENST00000592065 NECTIN2Q92692 538 aa16.79■□□□□ 0.28
GFAP-221ENST00000592065 COL15A1P39059 1388 aa16.79■□□□□ 0.28
GFAP-221ENST00000592065 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
GFAP-221ENST00000592065 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
GFAP-221ENST00000592065 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
GFAP-221ENST00000592065 BICDL1Q6ZP65 573 aa16.77■□□□□ 0.28
GFAP-221ENST00000592065 TBC1D2Q9BYX2 928 aa16.77■□□□□ 0.28
GFAP-221ENST00000592065 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.28
GFAP-221ENST00000592065 HDAC1Q13547 482 aaPredicted RBP16.77■□□□□ 0.28
GFAP-221ENST00000592065 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
GFAP-221ENST00000592065 TSR2Q969E8 191 aaKnown RBP16.77■□□□□ 0.28
GFAP-221ENST00000592065 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.28
GFAP-221ENST00000592065 HTATSF1O43719 755 aaKnown RBP16.76■□□□□ 0.27
GFAP-221ENST00000592065 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
GFAP-221ENST00000592065 ANXA1P04083 346 aa16.76■□□□□ 0.27
GFAP-221ENST00000592065 CCDC24Q8N4L8 307 aa16.76■□□□□ 0.27
GFAP-221ENST00000592065 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
GFAP-221ENST00000592065 IL16Q14005 1332 aa16.76■□□□□ 0.27
GFAP-221ENST00000592065 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
GFAP-221ENST00000592065 CICQ96RK0 1608 aaPredicted RBP16.76■□□□□ 0.27
GFAP-221ENST00000592065 STARD3NLO95772 234 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 TRIM27P14373 513 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
GFAP-221ENST00000592065 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 DDR1Q08345 913 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
GFAP-221ENST00000592065 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 SMC4Q9NTJ3 1288 aa16.75■□□□□ 0.27
GFAP-221ENST00000592065 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
GFAP-221ENST00000592065 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
GFAP-221ENST00000592065 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
GFAP-221ENST00000592065 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
GFAP-221ENST00000592065 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
GFAP-221ENST00000592065 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
GFAP-221ENST00000592065 ZPR1O75312 459 aa16.73■□□□□ 0.27
GFAP-221ENST00000592065 MYL6BP14649 208 aa16.73■□□□□ 0.27
GFAP-221ENST00000592065 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
GFAP-221ENST00000592065 ATF7IPQ6VMQ6 1270 aa16.73■□□□□ 0.27
GFAP-221ENST00000592065 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
GFAP-221ENST00000592065 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
GFAP-221ENST00000592065 ADRA2BP18089 450 aa16.72■□□□□ 0.27
GFAP-221ENST00000592065 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
GFAP-221ENST00000592065 NFIXQ14938 502 aa16.7■□□□□ 0.26
GFAP-221ENST00000592065 PROSER3Q2NL68 480 aa16.7■□□□□ 0.26
GFAP-221ENST00000592065 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
GFAP-221ENST00000592065 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
GFAP-221ENST00000592065 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 ITPRIPQ8IWB1 547 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
GFAP-221ENST00000592065 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
GFAP-221ENST00000592065 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
GFAP-221ENST00000592065 GPR162Q16538 588 aa16.68■□□□□ 0.26
GFAP-221ENST00000592065 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
GFAP-221ENST00000592065 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
GFAP-221ENST00000592065 CARMIL3Q8ND23 1372 aa16.68■□□□□ 0.26
GFAP-221ENST00000592065 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
GFAP-221ENST00000592065 POLRMTO00411 1230 aaKnown RBP16.67■□□□□ 0.26
GFAP-221ENST00000592065 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
GFAP-221ENST00000592065 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
GFAP-221ENST00000592065 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
GFAP-221ENST00000592065 TMEM57Q8N5G2 664 aa16.67■□□□□ 0.26
GFAP-221ENST00000592065 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
GFAP-221ENST00000592065 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
GFAP-221ENST00000592065 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
GFAP-221ENST00000592065 CHL1O00533 1208 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 CHRNA5P30532 468 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 HLFQ16534 295 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
GFAP-221ENST00000592065 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
GFAP-221ENST00000592065 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
GFAP-221ENST00000592065 TM4SF1P30408 202 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms