RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MAN1A2O60476 641 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 ABL2P42684 1182 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 KCNH2Q12809 1159 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 PTPRNQ16849 979 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 FAM135BQ49AJ0 1406 aa11.19□□□□□ -0.62
VMP1-213ENST00000591877 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
VMP1-213ENST00000591877 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
VMP1-213ENST00000591877 XRN1Q8IZH2 1706 aaKnown RBP11.18□□□□□ -0.62
VMP1-213ENST00000591877 PIK3R4Q99570 1358 aa11.18□□□□□ -0.62
VMP1-213ENST00000591877 MPNDQ8N594 471 aa11.18□□□□□ -0.62
VMP1-213ENST00000591877 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
VMP1-213ENST00000591877 CALR3Q96L12 384 aaKnown RBP11.18□□□□□ -0.62
VMP1-213ENST00000591877 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
VMP1-213ENST00000591877 GDF11O95390 407 aa11.17□□□□□ -0.62
VMP1-213ENST00000591877 ZNF326Q5BKZ1 582 aaKnown RBP11.17□□□□□ -0.62
VMP1-213ENST00000591877 GJD4Q96KN9 370 aaPredicted RBP11.17□□□□□ -0.62
VMP1-213ENST00000591877 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
VMP1-213ENST00000591877 PPLO60437 1756 aa11.17□□□□□ -0.62
VMP1-213ENST00000591877 SETD1AO15047 1707 aaKnown RBP11.17□□□□□ -0.62
VMP1-213ENST00000591877 MSH6P52701 1360 aa11.16□□□□□ -0.62
VMP1-213ENST00000591877 RASSF7Q02833 373 aa11.16□□□□□ -0.62
VMP1-213ENST00000591877 GLMNQ92990 594 aa11.16□□□□□ -0.62
VMP1-213ENST00000591877 AMOTL2Q9Y2J4 779 aa11.16□□□□□ -0.62
VMP1-213ENST00000591877 NCOA3Q9Y6Q9 1424 aa11.16□□□□□ -0.62
VMP1-213ENST00000591877 METP08581 1390 aa11.16□□□□□ -0.62
VMP1-213ENST00000591877 ZIC2O95409 532 aaPredicted RBP11.15□□□□□ -0.62
VMP1-213ENST00000591877 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
VMP1-213ENST00000591877 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
VMP1-213ENST00000591877 PDE4CQ08493 712 aa11.14□□□□□ -0.63
VMP1-213ENST00000591877 MTMR2Q13614 643 aa11.14□□□□□ -0.63
VMP1-213ENST00000591877 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
VMP1-213ENST00000591877 SLAIN2Q9P270 581 aa11.14□□□□□ -0.63
VMP1-213ENST00000591877 PHLPP1O60346 1717 aa11.13□□□□□ -0.63
VMP1-213ENST00000591877 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
VMP1-213ENST00000591877 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
VMP1-213ENST00000591877 MPHOSPH9Q99550 1183 aa11.13□□□□□ -0.63
VMP1-213ENST00000591877 IFT172Q9UG01 1749 aa11.12□□□□□ -0.63
VMP1-213ENST00000591877 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
VMP1-213ENST00000591877 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 COL16A1Q07092 1604 aaPredicted RBP11.11□□□□□ -0.63
VMP1-213ENST00000591877 POM121CA8CG34 1229 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 KRT76Q01546 638 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 IRF5Q13568 498 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 CNTNAP3BQ96NU0 1288 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 CNTNAP3Q9BZ76 1288 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 C19orf44Q9H6X5 657 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 CCDC9Q9Y3X0 531 aaKnown RBP11.11□□□□□ -0.63
VMP1-213ENST00000591877 NALCNQ8IZF0 1738 aa11.11□□□□□ -0.63
VMP1-213ENST00000591877 RPGRIP1LQ68CZ1 1315 aa11.1□□□□□ -0.63
VMP1-213ENST00000591877 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
VMP1-213ENST00000591877 BMP2P12643 396 aa11.1□□□□□ -0.63
VMP1-213ENST00000591877 CTHP32929 405 aa11.1□□□□□ -0.63
VMP1-213ENST00000591877 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
VMP1-213ENST00000591877 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
VMP1-213ENST00000591877 FOXJ1Q92949 421 aa11.1□□□□□ -0.63
VMP1-213ENST00000591877 NR3C2P08235 984 aa11.09□□□□□ -0.63
VMP1-213ENST00000591877 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
VMP1-213ENST00000591877 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
VMP1-213ENST00000591877 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
VMP1-213ENST00000591877 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
VMP1-213ENST00000591877 CDK15Q96Q40 435 aa11.08□□□□□ -0.64
VMP1-213ENST00000591877 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
VMP1-213ENST00000591877 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
VMP1-213ENST00000591877 DCCP43146 1447 aa11.08□□□□□ -0.64
VMP1-213ENST00000591877 ADGRF5Q8IZF2 1346 aa11.08□□□□□ -0.64
VMP1-213ENST00000591877 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
VMP1-213ENST00000591877 GPR37L1O60883 481 aa11.07□□□□□ -0.64
VMP1-213ENST00000591877 ATF3P18847 181 aa11.07□□□□□ -0.64
VMP1-213ENST00000591877 HMX1Q9NP08 348 aaPredicted RBP11.07□□□□□ -0.64
VMP1-213ENST00000591877 DNMT3LQ9UJW3 386 aa11.07□□□□□ -0.64
VMP1-213ENST00000591877 MST1RQ04912 1400 aa11.07□□□□□ -0.64
VMP1-213ENST00000591877 PRAG1Q86YV5 1406 aa11.07□□□□□ -0.64
VMP1-213ENST00000591877 ADGRL3Q9HAR2 1447 aa11.07□□□□□ -0.64
VMP1-213ENST00000591877 ROBO2Q9HCK4 1378 aa11.06□□□□□ -0.64
VMP1-213ENST00000591877 UPP2O95045 317 aa11.06□□□□□ -0.64
VMP1-213ENST00000591877 RGL3Q3MIN7 710 aa11.06□□□□□ -0.64
VMP1-213ENST00000591877 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
VMP1-213ENST00000591877 PTCH1Q13635 1447 aa11.06□□□□□ -0.64
VMP1-213ENST00000591877 NHSL1Q5SYE7 1610 aa11.06□□□□□ -0.64
VMP1-213ENST00000591877 ASXL1Q8IXJ9 1541 aa11.05□□□□□ -0.64
VMP1-213ENST00000591877 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
VMP1-213ENST00000591877 SOX11P35716 441 aa11.05□□□□□ -0.64
VMP1-213ENST00000591877 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
VMP1-213ENST00000591877 BRINP3Q76B58 766 aa11.05□□□□□ -0.64
VMP1-213ENST00000591877 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
VMP1-213ENST00000591877 SOS2Q07890 1332 aaPredicted RBP11.05□□□□□ -0.64
VMP1-213ENST00000591877 SHPRHQ149N8 1683 aa11.04□□□□□ -0.64
VMP1-213ENST00000591877 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
VMP1-213ENST00000591877 DESI1Q6ICB0 168 aa11.04□□□□□ -0.64
VMP1-213ENST00000591877 JCADQ9P266 1359 aa11.03□□□□□ -0.64
VMP1-213ENST00000591877 NR5A1Q13285 461 aa11.03□□□□□ -0.64
VMP1-213ENST00000591877 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
VMP1-213ENST00000591877 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
VMP1-213ENST00000591877 LRP6O75581 1613 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms