RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
BRCA1-227ENST00000591849 ST5P78524 1137 aa13.03□□□□□ -0.32
BRCA1-227ENST00000591849 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-227ENST00000591849 ZBTB3Q9H5J0 574 aa13.03□□□□□ -0.32
BRCA1-227ENST00000591849 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 HLFQ16534 295 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
BRCA1-227ENST00000591849 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 PIM2Q9P1W9 311 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.33
BRCA1-227ENST00000591849 H0YIN7 160 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 RGL2O15211 777 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.337e-6■■■□□ 18.9
BRCA1-227ENST00000591849 PDE6BP35913 854 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 XAGE3Q8WTP9 111 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
BRCA1-227ENST00000591849 DDX21Q9NR30 783 aaKnown RBP eCLIP13.01□□□□□ -0.33
BRCA1-227ENST00000591849 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-227ENST00000591849 CEP350Q5VT06 3117 aa13.01□□□□□ -0.33
BRCA1-227ENST00000591849 C10orf71Q711Q0 1435 aa13□□□□□ -0.33
BRCA1-227ENST00000591849 IL16Q14005 1332 aa13□□□□□ -0.33
BRCA1-227ENST00000591849 CHRNA5P30532 468 aa13□□□□□ -0.33
BRCA1-227ENST00000591849 PDIA6Q15084 440 aa13□□□□□ -0.33
BRCA1-227ENST00000591849 PROSER3Q2NL68 480 aa13□□□□□ -0.33
BRCA1-227ENST00000591849 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
BRCA1-227ENST00000591849 HYPKQ9NX55 129 aa13□□□□□ -0.33
BRCA1-227ENST00000591849 GPTP24298 496 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 PRR5LQ6MZQ0 368 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 C8orf58Q8NAV2 365 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.335e-8■■■□□ 17.3
BRCA1-227ENST00000591849 BRIP1Q9BX63 1249 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
BRCA1-227ENST00000591849 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
BRCA1-227ENST00000591849 HSP90AB3PQ58FF7 597 aa12.98□□□□□ -0.33
BRCA1-227ENST00000591849 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
BRCA1-227ENST00000591849 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
BRCA1-227ENST00000591849 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
BRCA1-227ENST00000591849 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-227ENST00000591849 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
BRCA1-227ENST00000591849 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
BRCA1-227ENST00000591849 ADCY9O60503 1353 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 PARP10Q53GL7 1025 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 MIER1Q8N108 512 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
BRCA1-227ENST00000591849 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
BRCA1-227ENST00000591849 N4BP2Q86UW6 1770 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-227ENST00000591849 DDX58O95786 925 aaKnown RBP12.95□□□□□ -0.34
BRCA1-227ENST00000591849 KCNA3P22001 575 aa12.95□□□□□ -0.34
BRCA1-227ENST00000591849 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
BRCA1-227ENST00000591849 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
BRCA1-227ENST00000591849 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
BRCA1-227ENST00000591849 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
BRCA1-227ENST00000591849 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
BRCA1-227ENST00000591849 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-227ENST00000591849 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
BRCA1-227ENST00000591849 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
BRCA1-227ENST00000591849 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
BRCA1-227ENST00000591849 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
BRCA1-227ENST00000591849 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
BRCA1-227ENST00000591849 LAMB4A4D0S4 1761 aa12.93□□□□□ -0.34
BRCA1-227ENST00000591849 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
BRCA1-227ENST00000591849 NPR1P16066 1061 aa12.92□□□□□ -0.34
BRCA1-227ENST00000591849 STYK1Q6J9G0 422 aa12.92□□□□□ -0.34
BRCA1-227ENST00000591849 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
BRCA1-227ENST00000591849 SRGNP10124 158 aa12.91□□□□□ -0.34
BRCA1-227ENST00000591849 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
BRCA1-227ENST00000591849 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
BRCA1-227ENST00000591849 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
BRCA1-227ENST00000591849 UBN2Q6ZU65 1347 aa12.9□□□□□ -0.34
BRCA1-227ENST00000591849 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
BRCA1-227ENST00000591849 E9PSI1 815 aa12.9□□□□□ -0.34
BRCA1-227ENST00000591849 VAMP4O75379 141 aa12.9□□□□□ -0.34
BRCA1-227ENST00000591849 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms