RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KIAA1551Q9HCM1 1747 aa14.98□□□□□ -0.01
VMP1-211ENST00000591315 A0A0G2JLW4 131 aa14.98□□□□□ -0.01
VMP1-211ENST00000591315 SERPINB2P05120 415 aa14.98□□□□□ -0.01
VMP1-211ENST00000591315 CALD1Q05682 793 aaKnown RBP14.98□□□□□ -0.01
VMP1-211ENST00000591315 CHPF2Q9P2E5 772 aa14.98□□□□□ -0.01
VMP1-211ENST00000591315 CARMIL3Q8ND23 1372 aa14.98□□□□□ -0.01
VMP1-211ENST00000591315 KIF13BQ9NQT8 1826 aa14.97□□□□□ -0.01
VMP1-211ENST00000591315 DPEP1P16444 411 aa14.97□□□□□ -0.01
VMP1-211ENST00000591315 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
VMP1-211ENST00000591315 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
VMP1-211ENST00000591315 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
VMP1-211ENST00000591315 PXDNLA1KZ92 1463 aa14.96□□□□□ -0.01
VMP1-211ENST00000591315 TCERG1O14776 1098 aaKnown RBP14.96□□□□□ -0.01
VMP1-211ENST00000591315 XAGE3Q8WTP9 111 aa14.96□□□□□ -0.01
VMP1-211ENST00000591315 NUP98P52948 1817 aa14.96□□□□□ -0.01
VMP1-211ENST00000591315 ERBB4Q15303 1308 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 MAP3K15Q6ZN16 1313 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 FANCIQ9NVI1 1328 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 FAM177BA6PVY3 158 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 CHRNA5P30532 468 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
VMP1-211ENST00000591315 GPR162Q16538 588 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
VMP1-211ENST00000591315 COPS6Q7L5N1 327 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
VMP1-211ENST00000591315 DDX21Q9NR30 783 aaKnown RBP eCLIP14.95□□□□□ -0.02
VMP1-211ENST00000591315 IL16Q14005 1332 aa14.94□□□□□ -0.02
VMP1-211ENST00000591315 KCNA3P22001 575 aa14.94□□□□□ -0.02
VMP1-211ENST00000591315 GPTP24298 496 aa14.94□□□□□ -0.02
VMP1-211ENST00000591315 ZNF428Q96B54 188 aa14.94□□□□□ -0.02
VMP1-211ENST00000591315 SETDB2Q96T68 719 aa14.94□□□□□ -0.02
VMP1-211ENST00000591315 NIP7Q9Y221 180 aaKnown RBP eCLIP14.94□□□□□ -0.02
VMP1-211ENST00000591315 ZNF521Q96K83 1311 aa14.93□□□□□ -0.02
VMP1-211ENST00000591315 ANKRD31Q8N7Z5 1873 aa14.93□□□□□ -0.02
VMP1-211ENST00000591315 HOXB7P09629 217 aa14.93□□□□□ -0.02
VMP1-211ENST00000591315 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
VMP1-211ENST00000591315 CLEC4GQ6UXB4 293 aa14.93□□□□□ -0.02
VMP1-211ENST00000591315 KIF6Q6ZMV9 814 aa14.93□□□□□ -0.02
VMP1-211ENST00000591315 ERVV-1B6SEH8 477 aa14.92□□□□□ -0.02
VMP1-211ENST00000591315 EXOSC9Q06265 439 aaKnown RBP14.92□□□□□ -0.02
VMP1-211ENST00000591315 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
VMP1-211ENST00000591315 UBN2Q6ZU65 1347 aa14.92□□□□□ -0.02
VMP1-211ENST00000591315 TGFB2P61812 414 aa14.91□□□□□ -0.02
VMP1-211ENST00000591315 ZNF652Q9Y2D9 606 aa14.91□□□□□ -0.02
VMP1-211ENST00000591315 TWISTNBQ3B726 338 aaPredicted RBP14.9□□□□□ -0.02
VMP1-211ENST00000591315 NBPF5PQ86XG9 351 aaPredicted RBP14.9□□□□□ -0.02
VMP1-211ENST00000591315 CNBD1Q8NA66 436 aa14.9□□□□□ -0.02
VMP1-211ENST00000591315 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
VMP1-211ENST00000591315 DBF4Q9UBU7 674 aaPredicted RBP14.9□□□□□ -0.02
VMP1-211ENST00000591315 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
VMP1-211ENST00000591315 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
VMP1-211ENST00000591315 SUSD4Q5VX71 490 aa14.89□□□□□ -0.03
VMP1-211ENST00000591315 GIGYF2Q6Y7W6 1299 aaKnown RBP14.89□□□□□ -0.03
VMP1-211ENST00000591315 G2E3Q7L622 706 aa14.89□□□□□ -0.03
VMP1-211ENST00000591315 NUTM1Q86Y26 1132 aa14.89□□□□□ -0.03
VMP1-211ENST00000591315 C2CD5Q86YS7 1000 aa14.89□□□□□ -0.03
VMP1-211ENST00000591315 ZNF34Q8IZ26 560 aa14.89□□□□□ -0.03
VMP1-211ENST00000591315 VAMP4O75379 141 aa14.88□□□□□ -0.03
VMP1-211ENST00000591315 GOLGA2Q08379 1002 aa14.88□□□□□ -0.03
VMP1-211ENST00000591315 HYPKQ9NX55 129 aa14.88□□□□□ -0.03
VMP1-211ENST00000591315 BCS1LQ9Y276 419 aa14.88□□□□□ -0.03
VMP1-211ENST00000591315 ATP10DQ9P241 1426 aa14.88□□□□□ -0.03
VMP1-211ENST00000591315 COL11A2P13942 1736 aaPredicted RBP14.88□□□□□ -0.03
VMP1-211ENST00000591315 ABCC12Q96J65 1359 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 RGL2O15211 777 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 NPHP1O15259 732 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 ERFEQ4G0M1 354 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 ANKRD13DQ6ZTN6 518 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 SYNE4Q8N205 404 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 BRIP1Q9BX63 1249 aa14.87□□□□□ -0.03
VMP1-211ENST00000591315 ATP5J2-PTCD1G3V325 749 aa14.86□□□□□ -0.03
VMP1-211ENST00000591315 TCIRG1Q13488 830 aa14.86□□□□□ -0.03
VMP1-211ENST00000591315 TNRC6CQ9HCJ0 1690 aaKnown RBP14.85□□□□□ -0.03
VMP1-211ENST00000591315 NTSR2O95665 410 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 ST5P78524 1137 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 SLFN5Q08AF3 891 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 TPTE2Q6XPS3 522 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 C3orf67Q6ZVT6 689 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 PLBD2Q8NHP8 589 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 MYH16Q9H6N6 1097 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 PIM2Q9P1W9 311 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 ANKRD36CQ5JPF3 1778 aa14.85□□□□□ -0.03
VMP1-211ENST00000591315 CHD4Q14839 1912 aa14.84□□□□□ -0.03
VMP1-211ENST00000591315 ARFGEF2Q9Y6D5 1785 aa14.84□□□□□ -0.03
VMP1-211ENST00000591315 H0YIN7 160 aa14.84□□□□□ -0.03
VMP1-211ENST00000591315 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
VMP1-211ENST00000591315 DALRD3Q5D0E6 543 aaKnown RBP14.84□□□□□ -0.03
VMP1-211ENST00000591315 NLRP10Q86W26 655 aa14.84□□□□□ -0.03
VMP1-211ENST00000591315 ZNF622Q969S3 477 aaKnown RBP eCLIP14.84□□□□□ -0.03
VMP1-211ENST00000591315 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.03
VMP1-211ENST00000591315 GRIN3BO60391 1043 aa14.83□□□□□ -0.04
VMP1-211ENST00000591315 GTF2E1P29083 439 aaPredicted RBP14.83□□□□□ -0.04
VMP1-211ENST00000591315 ISCA1Q9BUE6 129 aa14.83□□□□□ -0.04
VMP1-211ENST00000591315 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
VMP1-211ENST00000591315 SRGNP10124 158 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 PDE6BP35913 854 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 ARHGAP27Q6ZUM4 889 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 RIC3Q7Z5B4 369 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms