RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 EYA1Q99502 592 aa12.21□□□□□ -0.45
AP3D1-208ENST00000590683 ZNF277Q9NRM2 450 aaPredicted RBP12.21□□□□□ -0.45
AP3D1-208ENST00000590683 KIF24Q5T7B8 1368 aa12.2□□□□□ -0.46
AP3D1-208ENST00000590683 PDE6BP35913 854 aa12.2□□□□□ -0.46
AP3D1-208ENST00000590683 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
AP3D1-208ENST00000590683 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
AP3D1-208ENST00000590683 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
AP3D1-208ENST00000590683 FZD9O00144 591 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
AP3D1-208ENST00000590683 SOGA3Q5TF21 947 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 PRR5LQ6MZQ0 368 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 OLFM4Q6UX06 510 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 GPC2Q8N158 579 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 PDZRN3Q9UPQ7 1066 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 HPS5Q9UPZ3 1129 aa12.18□□□□□ -0.46
AP3D1-208ENST00000590683 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
AP3D1-208ENST00000590683 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
AP3D1-208ENST00000590683 EPS15P42566 896 aa12.17□□□□□ -0.46
AP3D1-208ENST00000590683 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
AP3D1-208ENST00000590683 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
AP3D1-208ENST00000590683 NFATC2IPQ8NCF5 419 aa12.17□□□□□ -0.46
AP3D1-208ENST00000590683 C7orf43Q8WVR3 580 aa12.17□□□□□ -0.46
AP3D1-208ENST00000590683 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
AP3D1-208ENST00000590683 COL4A5P29400 1685 aa12.16□□□□□ -0.46
AP3D1-208ENST00000590683 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
AP3D1-208ENST00000590683 SRGNP10124 158 aa12.16□□□□□ -0.46
AP3D1-208ENST00000590683 FKBP4Q02790 459 aaKnown RBP eCLIP12.16□□□□□ -0.46
AP3D1-208ENST00000590683 CCDC93Q567U6 631 aa12.16□□□□□ -0.46
AP3D1-208ENST00000590683 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
AP3D1-208ENST00000590683 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
AP3D1-208ENST00000590683 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
AP3D1-208ENST00000590683 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
AP3D1-208ENST00000590683 SCNN1DP51172 638 aa12.15□□□□□ -0.46
AP3D1-208ENST00000590683 CTU1Q7Z7A3 348 aaKnown RBP12.15□□□□□ -0.46
AP3D1-208ENST00000590683 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
AP3D1-208ENST00000590683 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
AP3D1-208ENST00000590683 NOGQ13253 232 aa12.14□□□□□ -0.47
AP3D1-208ENST00000590683 MASTLQ96GX5 879 aa12.14□□□□□ -0.47
AP3D1-208ENST00000590683 PUS7Q96PZ0 661 aaKnown RBP12.14□□□□□ -0.47
AP3D1-208ENST00000590683 ZNF408Q9H9D4 720 aa12.14□□□□□ -0.47
AP3D1-208ENST00000590683 TRPA1O75762 1119 aa12.13□□□□□ -0.47
AP3D1-208ENST00000590683 GLIS2Q9BZE0 524 aaPredicted RBP12.13□□□□□ -0.47
AP3D1-208ENST00000590683 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
AP3D1-208ENST00000590683 ST20-MTHFSA0A0A6YYL1 179 aa12.12□□□□□ -0.47
AP3D1-208ENST00000590683 MTHFSP49914 203 aa12.12□□□□□ -0.47
AP3D1-208ENST00000590683 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
AP3D1-208ENST00000590683 USP50Q70EL3 339 aaPredicted RBP12.12□□□□□ -0.47
AP3D1-208ENST00000590683 SYNE4Q8N205 404 aa12.12□□□□□ -0.47
AP3D1-208ENST00000590683 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
AP3D1-208ENST00000590683 RNF186Q9NXI6 227 aa12.12□□□□□ -0.47
AP3D1-208ENST00000590683 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
AP3D1-208ENST00000590683 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
AP3D1-208ENST00000590683 AKAP4Q5JQC9 854 aa12.11□□□□□ -0.47
AP3D1-208ENST00000590683 CARD11Q9BXL7 1154 aa12.11□□□□□ -0.47
AP3D1-208ENST00000590683 FAM155AB1AL88 458 aaPredicted RBP12.1□□□□□ -0.47
AP3D1-208ENST00000590683 EIF6P56537 245 aaKnown RBP12.1□□□□□ -0.47
AP3D1-208ENST00000590683 CNBD1Q8NA66 436 aa12.1□□□□□ -0.47
AP3D1-208ENST00000590683 A0A0C4DFX4 3053 aa12.09□□□□□ -0.47
AP3D1-208ENST00000590683 NPHP1O15259 732 aa12.09□□□□□ -0.47
AP3D1-208ENST00000590683 HUNKP57058 714 aa12.09□□□□□ -0.47
AP3D1-208ENST00000590683 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
AP3D1-208ENST00000590683 PLEKHO1Q53GL0 409 aaPredicted RBP12.09□□□□□ -0.47
AP3D1-208ENST00000590683 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
AP3D1-208ENST00000590683 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
AP3D1-208ENST00000590683 COL6A3P12111 3177 aa12.09□□□□□ -0.47
AP3D1-208ENST00000590683 POLR2AP24928 1970 aaKnown RBP12.09□□□□□ -0.47
AP3D1-208ENST00000590683 PAPPA2Q9BXP8 1791 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 ST5P78524 1137 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
AP3D1-208ENST00000590683 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 BRCA2P51587 3418 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 SNED1Q8TER0 1413 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 CUL9Q8IWT3 2517 aa12.08□□□□□ -0.48
AP3D1-208ENST00000590683 TRIOBPQ9H2D6 2365 aa12.07□□□□□ -0.48
AP3D1-208ENST00000590683 EIF5P55010 431 aaKnown RBP12.07□□□□□ -0.48
AP3D1-208ENST00000590683 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
AP3D1-208ENST00000590683 TBC1D2BQ9UPU7 963 aa12.07□□□□□ -0.48
AP3D1-208ENST00000590683 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
AP3D1-208ENST00000590683 NPR1P16066 1061 aa12.06□□□□□ -0.48
AP3D1-208ENST00000590683 C1orf141Q5JVX7 400 aa12.06□□□□□ -0.48
AP3D1-208ENST00000590683 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
AP3D1-208ENST00000590683 TESK2Q96S53 571 aa12.06□□□□□ -0.48
AP3D1-208ENST00000590683 SETDB2Q96T68 719 aa12.06□□□□□ -0.48
AP3D1-208ENST00000590683 ADARB2Q9NS39 739 aaKnown RBP12.06□□□□□ -0.48
AP3D1-208ENST00000590683 CENPFP49454 3210 aa12.06□□□□□ -0.48
AP3D1-208ENST00000590683 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
AP3D1-208ENST00000590683 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
AP3D1-208ENST00000590683 SIN3AQ96ST3 1273 aa12.05□□□□□ -0.48
AP3D1-208ENST00000590683 GPRC5DQ9NZD1 345 aa12.05□□□□□ -0.48
AP3D1-208ENST00000590683 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
AP3D1-208ENST00000590683 A0A087WZG4 1122 aa12.04□□□□□ -0.48
AP3D1-208ENST00000590683 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
AP3D1-208ENST00000590683 CSRNP1Q96S65 589 aa12.04□□□□□ -0.48
AP3D1-208ENST00000590683 PSMD1Q99460 953 aa12.04□□□□□ -0.48
AP3D1-208ENST00000590683 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
AP3D1-208ENST00000590683 HDAC9Q9UKV0 1011 aa12.04□□□□□ -0.48
AP3D1-208ENST00000590683 HIRAP54198 1017 aaPredicted RBP12.03□□□□□ -0.48
AP3D1-208ENST00000590683 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
AP3D1-208ENST00000590683 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms