RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 USPL1Q5W0Q7 1092 aa12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 TNRC6CQ9HCJ0 1690 aaKnown RBP12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.47
HMGN1P31-201ENST00000590085 MYH3P11055 1940 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 RGL2O15211 777 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 ZPR1O75312 459 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 ANXA1P04083 346 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 MYL6BP14649 208 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 SLFN5Q08AF3 891 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 FKBP8Q14318 412 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 TRMT2AQ8IZ69 625 aaKnown RBP12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 NLGN1Q8N2Q7 840 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 DDX21Q9NR30 783 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 ARFGEF1Q9Y6D6 1849 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 ATP10DQ9P241 1426 aa12.08□□□□□ -0.48
HMGN1P31-201ENST00000590085 MMP10P09238 476 aa12.07□□□□□ -0.48
HMGN1P31-201ENST00000590085 POLD1P28340 1107 aa12.07□□□□□ -0.48
HMGN1P31-201ENST00000590085 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
HMGN1P31-201ENST00000590085 DBF4Q9UBU7 674 aaPredicted RBP12.07□□□□□ -0.48
HMGN1P31-201ENST00000590085 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
HMGN1P31-201ENST00000590085 DDR1Q08345 913 aa12.06□□□□□ -0.48
HMGN1P31-201ENST00000590085 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
HMGN1P31-201ENST00000590085 ARXQ96QS3 562 aa12.06□□□□□ -0.48
HMGN1P31-201ENST00000590085 MAP3K15Q6ZN16 1313 aa12.06□□□□□ -0.48
HMGN1P31-201ENST00000590085 VAMP4O75379 141 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 TM4SF1P30408 202 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 NFIXQ14938 502 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 CCDC30Q5VVM6 783 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 CHMP4AQ9BY43 222 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
HMGN1P31-201ENST00000590085 ERVV-1B6SEH8 477 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 HLFQ16534 295 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 XAGE3Q8WTP9 111 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 ZNF652Q9Y2D9 606 aa12.04□□□□□ -0.48
HMGN1P31-201ENST00000590085 COPS6Q7L5N1 327 aa12.03□□□□□ -0.48
HMGN1P31-201ENST00000590085 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
HMGN1P31-201ENST00000590085 PPP1R1BQ9UD71 204 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P31-201ENST00000590085 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P31-201ENST00000590085 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.48
HMGN1P31-201ENST00000590085 GIGYF2Q6Y7W6 1299 aaKnown RBP12.02□□□□□ -0.49
HMGN1P31-201ENST00000590085 FHDC1Q9C0D6 1143 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P31-201ENST00000590085 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
HMGN1P31-201ENST00000590085 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
HMGN1P31-201ENST00000590085 CHD4Q14839 1912 aa12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 AIMP1Q12904 312 aaKnown RBP12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 PLBD2Q8NHP8 589 aa12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 UBN2Q6ZU65 1347 aa12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 ADCY9O60503 1353 aa12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 RIC1Q4ADV7 1423 aa12.01□□□□□ -0.49
HMGN1P31-201ENST00000590085 TAF1P21675 1872 aa12□□□□□ -0.49
HMGN1P31-201ENST00000590085 TCERG1O14776 1098 aaKnown RBP12□□□□□ -0.49
HMGN1P31-201ENST00000590085 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
HMGN1P31-201ENST00000590085 G2E3Q7L622 706 aa12□□□□□ -0.49
HMGN1P31-201ENST00000590085 SETDB2Q96T68 719 aa12□□□□□ -0.49
HMGN1P31-201ENST00000590085 CD2APQ9Y5K6 639 aa12□□□□□ -0.49
HMGN1P31-201ENST00000590085 SPEF2Q9C093 1822 aa12□□□□□ -0.49
HMGN1P31-201ENST00000590085 SLC4A2P04920 1241 aa11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 SERPINB2P05120 415 aa11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 ZNF34Q8IZ26 560 aa11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 ZNF428Q96B54 188 aa11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 NIP7Q9Y221 180 aaKnown RBP eCLIP11.99□□□□□ -0.49
HMGN1P31-201ENST00000590085 CCDC88AQ3V6T2 1871 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 SLX4Q8IY92 1834 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 ABCC12Q96J65 1359 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 FLIIQ13045 1269 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 PRR5LQ6MZQ0 368 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
HMGN1P31-201ENST00000590085 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
HMGN1P31-201ENST00000590085 GPTP24298 496 aa11.97□□□□□ -0.49
HMGN1P31-201ENST00000590085 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
HMGN1P31-201ENST00000590085 CNBD1Q8NA66 436 aa11.97□□□□□ -0.49
HMGN1P31-201ENST00000590085 SBF1O95248 1867 aa11.97□□□□□ -0.49
HMGN1P31-201ENST00000590085 NTSR2O95665 410 aa11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 DDX58O95786 925 aaKnown RBP11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 KSR2Q6VAB6 950 aa11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
HMGN1P31-201ENST00000590085 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms