RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 DDNO94850 711 aaPredicted RBP19.02■□□□□ 0.64
SAFB2-205ENST00000590000 DCTN1Q14203 1278 aa19.02■□□□□ 0.64
SAFB2-205ENST00000590000 ERFEQ4G0M1 354 aa19.02■□□□□ 0.64
SAFB2-205ENST00000590000 PRPF40BQ6NWY9 871 aaKnown RBP19.02■□□□□ 0.64
SAFB2-205ENST00000590000 LTBP3Q9NS15 1303 aa19.01■□□□□ 0.63
SAFB2-205ENST00000590000 BTBD11A6QL63 1104 aa19.01■□□□□ 0.63
SAFB2-205ENST00000590000 PDE6BP35913 854 aa19.01■□□□□ 0.63
SAFB2-205ENST00000590000 MCM10Q7L590 875 aa19.01■□□□□ 0.63
SAFB2-205ENST00000590000 SLC51AQ86UW1 340 aa19.01■□□□□ 0.63
SAFB2-205ENST00000590000 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
SAFB2-205ENST00000590000 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
SAFB2-205ENST00000590000 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
SAFB2-205ENST00000590000 HSPA1AP0DMV8 641 aaKnown RBP19■□□□□ 0.63
SAFB2-205ENST00000590000 HSPA1BP0DMV9 641 aaKnown RBP19■□□□□ 0.63
SAFB2-205ENST00000590000 SETDB2Q96T68 719 aa19■□□□□ 0.63
SAFB2-205ENST00000590000 STYK1Q6J9G0 422 aa18.99■□□□□ 0.63
SAFB2-205ENST00000590000 TAOK3Q9H2K8 898 aa18.98■□□□□ 0.63
SAFB2-205ENST00000590000 SNED1Q8TER0 1413 aa18.98■□□□□ 0.63
SAFB2-205ENST00000590000 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
SAFB2-205ENST00000590000 CAPN15O75808 1086 aa18.97■□□□□ 0.63
SAFB2-205ENST00000590000 PPP2R1AP30153 589 aa18.97■□□□□ 0.63
SAFB2-205ENST00000590000 HLFQ16534 295 aa18.97■□□□□ 0.63
SAFB2-205ENST00000590000 DLG5Q8TDM6 1919 aa18.97■□□□□ 0.63
SAFB2-205ENST00000590000 COL4A5P29400 1685 aa18.97■□□□□ 0.63
SAFB2-205ENST00000590000 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
SAFB2-205ENST00000590000 MASTLQ96GX5 879 aa18.96■□□□□ 0.63
SAFB2-205ENST00000590000 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
SAFB2-205ENST00000590000 ZNF541Q9H0D2 1346 aa18.96■□□□□ 0.63
SAFB2-205ENST00000590000 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
SAFB2-205ENST00000590000 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
SAFB2-205ENST00000590000 LAMB4A4D0S4 1761 aa18.95■□□□□ 0.62
SAFB2-205ENST00000590000 KDM3BQ7LBC6 1761 aa18.94■□□□□ 0.62
SAFB2-205ENST00000590000 CHADLQ6NUI6 762 aa18.94■□□□□ 0.62
SAFB2-205ENST00000590000 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
SAFB2-205ENST00000590000 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 SCN4AP35499 1836 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
SAFB2-205ENST00000590000 ST5P78524 1137 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 NBPF5PQ86XG9 351 aaPredicted RBP18.93■□□□□ 0.62
SAFB2-205ENST00000590000 TNS4Q8IZW8 715 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 MKRN1Q9UHC7 482 aaKnown RBP18.93■□□□□ 0.62
SAFB2-205ENST00000590000 PASKQ96RG2 1323 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 NUP98P52948 1817 aa18.93■□□□□ 0.62
SAFB2-205ENST00000590000 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
SAFB2-205ENST00000590000 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
SAFB2-205ENST00000590000 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
SAFB2-205ENST00000590000 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
SAFB2-205ENST00000590000 TAF1DQ9H5J8 278 aaPredicted RBP18.92■□□□□ 0.62
SAFB2-205ENST00000590000 ZNF277Q9NRM2 450 aaPredicted RBP18.92■□□□□ 0.62
SAFB2-205ENST00000590000 L3MBTL3Q96JM7 780 aaPredicted RBP18.91■□□□□ 0.62
SAFB2-205ENST00000590000 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
SAFB2-205ENST00000590000 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
SAFB2-205ENST00000590000 NPR1P16066 1061 aa18.9■□□□□ 0.62
SAFB2-205ENST00000590000 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
SAFB2-205ENST00000590000 CCDC93Q567U6 631 aa18.89■□□□□ 0.61
SAFB2-205ENST00000590000 CREBZFQ9NS37 354 aa18.89■□□□□ 0.61
SAFB2-205ENST00000590000 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
SAFB2-205ENST00000590000 THUMPD2Q9BTF0 503 aaKnown RBP18.88■□□□□ 0.61
SAFB2-205ENST00000590000 NPHP1O15259 732 aa18.87■□□□□ 0.61
SAFB2-205ENST00000590000 CNTNAP1P78357 1384 aa18.87■□□□□ 0.61
SAFB2-205ENST00000590000 NUTM1Q86Y26 1132 aa18.87■□□□□ 0.61
SAFB2-205ENST00000590000 CFAP53Q96M91 514 aa18.87■□□□□ 0.61
SAFB2-205ENST00000590000 UBN2Q6ZU65 1347 aa18.86■□□□□ 0.61
SAFB2-205ENST00000590000 FOXN1O15353 648 aa18.86■□□□□ 0.61
SAFB2-205ENST00000590000 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
SAFB2-205ENST00000590000 C3orf67Q6ZVT6 689 aa18.86■□□□□ 0.61
SAFB2-205ENST00000590000 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 FZD9O00144 591 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 HTATSF1O43719 755 aaKnown RBP18.85■□□□□ 0.61
SAFB2-205ENST00000590000 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 TPTE2Q6XPS3 522 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 LDHDQ86WU2 507 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 NGEFQ8N5V2 710 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 RTF1Q92541 710 aaKnown RBP18.85■□□□□ 0.61
SAFB2-205ENST00000590000 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
SAFB2-205ENST00000590000 RGL2O15211 777 aa18.84■□□□□ 0.61
SAFB2-205ENST00000590000 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
SAFB2-205ENST00000590000 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
SAFB2-205ENST00000590000 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
SAFB2-205ENST00000590000 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
SAFB2-205ENST00000590000 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
SAFB2-205ENST00000590000 VEGFBP49765 207 aa18.83■□□□□ 0.6
SAFB2-205ENST00000590000 EIF4A1P60842 406 aaKnown RBP18.83■□□□□ 0.6
SAFB2-205ENST00000590000 LRP10Q7Z4F1 713 aa18.83■□□□□ 0.6
SAFB2-205ENST00000590000 EAPPQ56P03 285 aaPredicted RBP18.82■□□□□ 0.6
SAFB2-205ENST00000590000 MAP1SQ66K74 1059 aaPredicted RBP18.82■□□□□ 0.6
SAFB2-205ENST00000590000 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
SAFB2-205ENST00000590000 IQCA1LA6NCM1 817 aa18.81■□□□□ 0.6
SAFB2-205ENST00000590000 GPTP24298 496 aa18.81■□□□□ 0.6
SAFB2-205ENST00000590000 EPHX2P34913 555 aa18.81■□□□□ 0.6
SAFB2-205ENST00000590000 SUSD4Q5VX71 490 aa18.81■□□□□ 0.6
SAFB2-205ENST00000590000 RRP7AQ9Y3A4 280 aaKnown RBP18.81■□□□□ 0.6
SAFB2-205ENST00000590000 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
SAFB2-205ENST00000590000 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
SAFB2-205ENST00000590000 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
SAFB2-205ENST00000590000 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
SAFB2-205ENST00000590000 RTKN2Q8IZC4 609 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms