RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 HLFQ16534 295 aa16.76■□□□□ 0.27
RFX1-207ENST00000589937 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
RFX1-207ENST00000589937 H0YIN7 160 aa16.75■□□□□ 0.27
RFX1-207ENST00000589937 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
RFX1-207ENST00000589937 NGEFQ8N5V2 710 aa16.75■□□□□ 0.27
RFX1-207ENST00000589937 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
RFX1-207ENST00000589937 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
RFX1-207ENST00000589937 FAM177BA6PVY3 158 aa16.74■□□□□ 0.27
RFX1-207ENST00000589937 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
RFX1-207ENST00000589937 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
RFX1-207ENST00000589937 LAMB2P55268 1798 aa16.74■□□□□ 0.27
RFX1-207ENST00000589937 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
RFX1-207ENST00000589937 NPHP1O15259 732 aa16.73■□□□□ 0.27
RFX1-207ENST00000589937 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
RFX1-207ENST00000589937 C21orf2O43822 256 aa16.72■□□□□ 0.27
RFX1-207ENST00000589937 MYL6BP14649 208 aa16.72■□□□□ 0.27
RFX1-207ENST00000589937 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
RFX1-207ENST00000589937 RIPK4P57078 832 aa16.72■□□□□ 0.27
RFX1-207ENST00000589937 NBPF5PQ86XG9 351 aaPredicted RBP16.72■□□□□ 0.27
RFX1-207ENST00000589937 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
RFX1-207ENST00000589937 PDE6BP35913 854 aa16.71■□□□□ 0.27
RFX1-207ENST00000589937 ST5P78524 1137 aa16.71■□□□□ 0.27
RFX1-207ENST00000589937 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
RFX1-207ENST00000589937 TSPYL4Q9UJ04 414 aa16.71■□□□□ 0.27
RFX1-207ENST00000589937 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
RFX1-207ENST00000589937 ANXA1P04083 346 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 SRGNP10124 158 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 HSPA6P17066 643 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 NEUROD2Q15784 382 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
RFX1-207ENST00000589937 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
RFX1-207ENST00000589937 PROSER3Q2NL68 480 aa16.69■□□□□ 0.26
RFX1-207ENST00000589937 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
RFX1-207ENST00000589937 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
RFX1-207ENST00000589937 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
RFX1-207ENST00000589937 UBN2Q6ZU65 1347 aa16.69■□□□□ 0.26
RFX1-207ENST00000589937 LMNB1P20700 586 aa16.68■□□□□ 0.26
RFX1-207ENST00000589937 GPTP24298 496 aa16.68■□□□□ 0.26
RFX1-207ENST00000589937 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
RFX1-207ENST00000589937 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
RFX1-207ENST00000589937 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
RFX1-207ENST00000589937 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
RFX1-207ENST00000589937 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
RFX1-207ENST00000589937 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
RFX1-207ENST00000589937 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
RFX1-207ENST00000589937 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
RFX1-207ENST00000589937 TAF1P21675 1872 aa16.67■□□□□ 0.26
RFX1-207ENST00000589937 EIF2S2P20042 333 aaKnown RBP16.66■□□□□ 0.26
RFX1-207ENST00000589937 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
RFX1-207ENST00000589937 PDIA6Q15084 440 aa16.66■□□□□ 0.26
RFX1-207ENST00000589937 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
RFX1-207ENST00000589937 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
RFX1-207ENST00000589937 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
RFX1-207ENST00000589937 TOMM70O94826 608 aa16.65■□□□□ 0.26
RFX1-207ENST00000589937 KIF6Q6ZMV9 814 aa16.65■□□□□ 0.26
RFX1-207ENST00000589937 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
RFX1-207ENST00000589937 ERFEQ4G0M1 354 aa16.64■□□□□ 0.25
RFX1-207ENST00000589937 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
RFX1-207ENST00000589937 RUNDC1Q96C34 613 aa16.64■□□□□ 0.25
RFX1-207ENST00000589937 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
RFX1-207ENST00000589937 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.25
RFX1-207ENST00000589937 COL4A5P29400 1685 aa16.64■□□□□ 0.25
RFX1-207ENST00000589937 SNED1Q8TER0 1413 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 ERVV-1B6SEH8 477 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 RGL2O15211 777 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 HTRA3P83110 453 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 TPTE2Q6XPS3 522 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
RFX1-207ENST00000589937 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
RFX1-207ENST00000589937 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
RFX1-207ENST00000589937 NPR1P16066 1061 aa16.62■□□□□ 0.25
RFX1-207ENST00000589937 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
RFX1-207ENST00000589937 ZNF428Q96B54 188 aa16.62■□□□□ 0.25
RFX1-207ENST00000589937 ERBB4Q15303 1308 aa16.62■□□□□ 0.25
RFX1-207ENST00000589937 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
RFX1-207ENST00000589937 GLTPD2A6NH11 291 aa16.61■□□□□ 0.25
RFX1-207ENST00000589937 NTSR2O95665 410 aa16.61■□□□□ 0.25
RFX1-207ENST00000589937 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
RFX1-207ENST00000589937 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
RFX1-207ENST00000589937 RBM46Q8TBY0 533 aaKnown RBP16.61■□□□□ 0.25
RFX1-207ENST00000589937 IBTKQ9P2D0 1353 aaPredicted RBP16.61■□□□□ 0.25
RFX1-207ENST00000589937 RIC1Q4ADV7 1423 aa16.61■□□□□ 0.25
RFX1-207ENST00000589937 COL4A1P02462 1669 aa16.6■□□□□ 0.25
RFX1-207ENST00000589937 POTECB2RU33 542 aa16.6■□□□□ 0.25
RFX1-207ENST00000589937 CHL1O00533 1208 aa16.6■□□□□ 0.25
RFX1-207ENST00000589937 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
RFX1-207ENST00000589937 GIGYF2Q6Y7W6 1299 aaKnown RBP16.6■□□□□ 0.25
RFX1-207ENST00000589937 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
RFX1-207ENST00000589937 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
RFX1-207ENST00000589937 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
RFX1-207ENST00000589937 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
RFX1-207ENST00000589937 XAGE3Q8WTP9 111 aa16.59■□□□□ 0.25
RFX1-207ENST00000589937 ZNF277Q9NRM2 450 aaPredicted RBP16.59■□□□□ 0.25
RFX1-207ENST00000589937 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
RFX1-207ENST00000589937 BABAM1Q9NWV8 329 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms