RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
VPS25-204ENST00000589577 BRIP1Q9BX63 1249 aa8.57□□□□□ -1.04
VPS25-204ENST00000589577 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
VPS25-204ENST00000589577 ZBTB1Q9Y2K1 713 aa8.57□□□□□ -1.04
VPS25-204ENST00000589577 SNED1Q8TER0 1413 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 BICDL1Q6ZP65 573 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 SAPCD2Q86UD0 394 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 NFATC2IPQ8NCF5 419 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 ZIC5Q96T25 663 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 ZNF277Q9NRM2 450 aaPredicted RBP8.56□□□□□ -1.04
VPS25-204ENST00000589577 MRC1P22897 1456 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 COL6A3P12111 3177 aa8.56□□□□□ -1.04
VPS25-204ENST00000589577 FZD9O00144 591 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
VPS25-204ENST00000589577 HSP90AB1P08238 724 aaKnown RBP8.55□□□□□ -1.04
VPS25-204ENST00000589577 SRGNP10124 158 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 PDE6BP35913 854 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 HABP4Q5JVS0 413 aaKnown RBP8.55□□□□□ -1.04
VPS25-204ENST00000589577 TBC1D9BQ66K14 1250 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 CIAPIN1Q6FI81 312 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 OLFM4Q6UX06 510 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 SIN3AQ96ST3 1273 aa8.55□□□□□ -1.04
VPS25-204ENST00000589577 AKAP11Q9UKA4 1901 aa8.54□□□□□ -1.04
VPS25-204ENST00000589577 FKBP4Q02790 459 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS25-204ENST00000589577 TRIM26Q12899 539 aaPredicted RBP8.54□□□□□ -1.04
VPS25-204ENST00000589577 EIF4A2Q14240 407 aaKnown RBP8.54□□□□□ -1.04
VPS25-204ENST00000589577 STYK1Q6J9G0 422 aa8.54□□□□□ -1.04
VPS25-204ENST00000589577 ZNF530Q6P9A1 599 aaPredicted RBP8.54□□□□□ -1.04
VPS25-204ENST00000589577 GPC2Q8N158 579 aa8.54□□□□□ -1.04
VPS25-204ENST00000589577 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
VPS25-204ENST00000589577 EPS15P42566 896 aa8.53□□□□□ -1.04
VPS25-204ENST00000589577 SCNN1DP51172 638 aa8.53□□□□□ -1.04
VPS25-204ENST00000589577 SOGA3Q5TF21 947 aa8.53□□□□□ -1.04
VPS25-204ENST00000589577 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
VPS25-204ENST00000589577 CARD14Q9BXL6 1004 aa8.53□□□□□ -1.04
VPS25-204ENST00000589577 CUL9Q8IWT3 2517 aa8.53□□□□□ -1.04
VPS25-204ENST00000589577 ST20-MTHFSA0A0A6YYL1 179 aa8.52□□□□□ -1.05
VPS25-204ENST00000589577 MTHFSP49914 203 aa8.52□□□□□ -1.05
VPS25-204ENST00000589577 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS25-204ENST00000589577 CCDC93Q567U6 631 aa8.52□□□□□ -1.05
VPS25-204ENST00000589577 GCC1Q96CN9 775 aa8.52□□□□□ -1.05
VPS25-204ENST00000589577 HHIPL1Q96JK4 782 aa8.52□□□□□ -1.05
VPS25-204ENST00000589577 POLKQ9UBT6 870 aa8.52□□□□□ -1.05
VPS25-204ENST00000589577 RANBP2P49792 3224 aaKnown RBP8.52□□□□□ -1.05
VPS25-204ENST00000589577 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
VPS25-204ENST00000589577 EIF5P55010 431 aaKnown RBP8.51□□□□□ -1.05
VPS25-204ENST00000589577 MASTLQ96GX5 879 aa8.51□□□□□ -1.05
VPS25-204ENST00000589577 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
VPS25-204ENST00000589577 CANXP27824 592 aaKnown RBP8.5□□□□□ -1.05
VPS25-204ENST00000589577 SLC39A6Q13433 755 aa8.5□□□□□ -1.05
VPS25-204ENST00000589577 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
VPS25-204ENST00000589577 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
VPS25-204ENST00000589577 FAM155AB1AL88 458 aaPredicted RBP8.49□□□□□ -1.05
VPS25-204ENST00000589577 NOGQ13253 232 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 AMOTQ4VCS5 1084 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 USP50Q70EL3 339 aaPredicted RBP8.49□□□□□ -1.05
VPS25-204ENST00000589577 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 NBPF15Q8N660 670 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 GLIS2Q9BZE0 524 aaPredicted RBP8.49□□□□□ -1.05
VPS25-204ENST00000589577 SLC52A2Q9HAB3 445 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 GJA3Q9Y6H8 435 aa8.49□□□□□ -1.05
VPS25-204ENST00000589577 SIPA1L3O60292 1781 aaPredicted RBP8.48□□□□□ -1.05
VPS25-204ENST00000589577 RBBP6Q7Z6E9 1792 aaKnown RBP8.48□□□□□ -1.05
VPS25-204ENST00000589577 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
VPS25-204ENST00000589577 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 C1orf141Q5JVX7 400 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 CTU1Q7Z7A3 348 aaKnown RBP8.48□□□□□ -1.05
VPS25-204ENST00000589577 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 SYNE4Q8N205 404 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 SAGE1Q9NXZ1 904 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 TRIOBPQ9H2D6 2365 aa8.48□□□□□ -1.05
VPS25-204ENST00000589577 LMOD1P29536 600 aaPredicted RBP8.47□□□□□ -1.05
VPS25-204ENST00000589577 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
VPS25-204ENST00000589577 LGR6Q9HBX8 967 aa8.47□□□□□ -1.05
VPS25-204ENST00000589577 RNF186Q9NXI6 227 aa8.47□□□□□ -1.05
VPS25-204ENST00000589577 POLR2AP24928 1970 aaKnown RBP8.47□□□□□ -1.05
VPS25-204ENST00000589577 PAPPA2Q9BXP8 1791 aa8.47□□□□□ -1.05
VPS25-204ENST00000589577 CEP290O15078 2479 aa8.46□□□□□ -1.05
VPS25-204ENST00000589577 TRPA1O75762 1119 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 CAMTA2O94983 1202 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 NPR1P16066 1061 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 ST5P78524 1137 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 DLK2Q6UY11 383 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 VSIG10Q8N0Z9 540 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 PSMD1Q99460 953 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 ZNF408Q9H9D4 720 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 GPRC5DQ9NZD1 345 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
VPS25-204ENST00000589577 UNC80Q8N2C7 3258 aa8.45□□□□□ -1.06
VPS25-204ENST00000589577 A0A087WZG4 1122 aa8.45□□□□□ -1.06
VPS25-204ENST00000589577 DLL1O00548 723 aa8.45□□□□□ -1.06
VPS25-204ENST00000589577 EIF6P56537 245 aaKnown RBP8.45□□□□□ -1.06
VPS25-204ENST00000589577 JDP2Q8WYK2 163 aa8.45□□□□□ -1.06
VPS25-204ENST00000589577 SETDB2Q96T68 719 aa8.45□□□□□ -1.06
VPS25-204ENST00000589577 ADARB2Q9NS39 739 aaKnown RBP8.45□□□□□ -1.06
VPS25-204ENST00000589577 LAMA3Q16787 3333 aa8.44□□□□□ -1.06
VPS25-204ENST00000589577 HIRAP54198 1017 aaPredicted RBP8.44□□□□□ -1.06
VPS25-204ENST00000589577 HUNKP57058 714 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms