RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 USP42Q9H9J4 1324 aaKnown RBP25.08■■□□□ 1.6
CIRBP-220ENST00000588917 ERVV-1B6SEH8 477 aa25.07■■□□□ 1.6
CIRBP-220ENST00000588917 PROSER3Q2NL68 480 aa25.07■■□□□ 1.6
CIRBP-220ENST00000588917 CLEC4GQ6UXB4 293 aa25.07■■□□□ 1.6
CIRBP-220ENST00000588917 LRP10Q7Z4F1 713 aa25.07■■□□□ 1.6
CIRBP-220ENST00000588917 ZNF652Q9Y2D9 606 aa25.07■■□□□ 1.6
CIRBP-220ENST00000588917 DDX58O95786 925 aaKnown RBP25.06■■□□□ 1.6
CIRBP-220ENST00000588917 ANXA1P04083 346 aa25.06■■□□□ 1.6
CIRBP-220ENST00000588917 XAGE3Q8WTP9 111 aa25.06■■□□□ 1.6
CIRBP-220ENST00000588917 AIMP1Q12904 312 aaKnown RBP25.05■■□□□ 1.6
CIRBP-220ENST00000588917 USPL1Q5W0Q7 1092 aa25.05■■□□□ 1.6
CIRBP-220ENST00000588917 GYS1P13807 737 aa25.04■■□□□ 1.6
CIRBP-220ENST00000588917 ANKRD13DQ6ZTN6 518 aa25.04■■□□□ 1.6
CIRBP-220ENST00000588917 COL24A1Q17RW2 1714 aa25.03■■□□□ 1.6
CIRBP-220ENST00000588917 TCERG1O14776 1098 aaKnown RBP25.03■■□□□ 1.6
CIRBP-220ENST00000588917 CAMTA2O94983 1202 aa25.03■■□□□ 1.6
CIRBP-220ENST00000588917 PELP1Q8IZL8 1130 aaKnown RBP25.03■■□□□ 1.6
CIRBP-220ENST00000588917 NLGN2Q8NFZ4 835 aa25.03■■□□□ 1.6
CIRBP-220ENST00000588917 SRP68Q9UHB9 627 aaKnown RBP25.03■■□□□ 1.6
CIRBP-220ENST00000588917 MAP3K15Q6ZN16 1313 aa25.03■■□□□ 1.6
CIRBP-220ENST00000588917 TTLL7Q6ZT98 887 aa25.02■■□□□ 1.6
CIRBP-220ENST00000588917 PHAXQ9H814 394 aaKnown RBP25.02■■□□□ 1.6
CIRBP-220ENST00000588917 TUBGCP6Q96RT7 1819 aa25.02■■□□□ 1.6
CIRBP-220ENST00000588917 PLBD2Q8NHP8 589 aa25.01■■□□□ 1.59
CIRBP-220ENST00000588917 SSH1Q8WYL5 1049 aa25■■□□□ 1.59
CIRBP-220ENST00000588917 RARSP54136 660 aaKnown RBP24.99■■□□□ 1.59
CIRBP-220ENST00000588917 FLIIQ13045 1269 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 CHD4Q14839 1912 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 HSP90AB3PQ58FF7 597 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 MSL1Q68DK7 614 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 GIGYF2Q6Y7W6 1299 aaKnown RBP24.99■■□□□ 1.59
CIRBP-220ENST00000588917 RIC3Q7Z5B4 369 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 MRPL50Q8N5N7 158 aaKnown RBP24.99■■□□□ 1.59
CIRBP-220ENST00000588917 ZBTB3Q9H5J0 574 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 SMC4Q9NTJ3 1288 aa24.99■■□□□ 1.59
CIRBP-220ENST00000588917 GOLGB1Q14789 3259 aaKnown RBP24.98■■□□□ 1.59
CIRBP-220ENST00000588917 BRPF1P55201 1214 aaPredicted RBP24.98■■□□□ 1.59
CIRBP-220ENST00000588917 FKBP8Q14318 412 aa24.98■■□□□ 1.59
CIRBP-220ENST00000588917 BCL2L12Q9HB09 334 aa24.98■■□□□ 1.59
CIRBP-220ENST00000588917 KSR2Q6VAB6 950 aa24.97■■□□□ 1.59
CIRBP-220ENST00000588917 SETDB2Q96T68 719 aa24.97■■□□□ 1.59
CIRBP-220ENST00000588917 GRIN3BO60391 1043 aa24.96■■□□□ 1.59
CIRBP-220ENST00000588917 TM4SF1P30408 202 aa24.96■■□□□ 1.59
CIRBP-220ENST00000588917 FKBP5Q13451 457 aaPredicted RBP24.96■■□□□ 1.59
CIRBP-220ENST00000588917 HLFQ16534 295 aa24.96■■□□□ 1.59
CIRBP-220ENST00000588917 PTPRCP08575 1304 aa24.95■■□□□ 1.58
CIRBP-220ENST00000588917 G2E3Q7L622 706 aa24.95■■□□□ 1.58
CIRBP-220ENST00000588917 PARP3Q9Y6F1 533 aa24.95■■□□□ 1.58
CIRBP-220ENST00000588917 TCIRG1Q13488 830 aa24.94■■□□□ 1.58
CIRBP-220ENST00000588917 CD2APQ9Y5K6 639 aa24.94■■□□□ 1.58
CIRBP-220ENST00000588917 C4AP0C0L4 1744 aa24.94■■□□□ 1.58
CIRBP-220ENST00000588917 PI4KAP2A4QPH2 592 aa24.93■■□□□ 1.58
CIRBP-220ENST00000588917 YBX3P16989 372 aaKnown RBP eCLIP24.93■■□□□ 1.58
CIRBP-220ENST00000588917 TBC1D9BQ66K14 1250 aa24.93■■□□□ 1.58
CIRBP-220ENST00000588917 PI4KAP1Q8N8J0 262 aa24.93■■□□□ 1.58
CIRBP-220ENST00000588917 NIP7Q9Y221 180 aaKnown RBP eCLIP24.93■■□□□ 1.58
CIRBP-220ENST00000588917 CACNA1FO60840 1977 aa24.93■■□□□ 1.58
CIRBP-220ENST00000588917 IPO8O15397 1037 aaKnown RBP24.92■■□□□ 1.58
CIRBP-220ENST00000588917 MMP10P09238 476 aa24.92■■□□□ 1.58
CIRBP-220ENST00000588917 NEXNQ0ZGT2 675 aa24.92■■□□□ 1.58
CIRBP-220ENST00000588917 NFIXQ14938 502 aa24.92■■□□□ 1.58
CIRBP-220ENST00000588917 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
CIRBP-220ENST00000588917 KIF16BQ96L93 1317 aa24.91■■□□□ 1.58
CIRBP-220ENST00000588917 BICDL1Q6ZP65 573 aa24.91■■□□□ 1.58
CIRBP-220ENST00000588917 ZNF34Q8IZ26 560 aa24.91■■□□□ 1.58
CIRBP-220ENST00000588917 MAP3K2Q9Y2U5 619 aa24.91■■□□□ 1.58
CIRBP-220ENST00000588917 C1QTNF8P60827 252 aa24.9■■□□□ 1.58
CIRBP-220ENST00000588917 PARP10Q53GL7 1025 aa24.9■■□□□ 1.58
CIRBP-220ENST00000588917 ARHGAP45Q92619 1136 aa24.9■■□□□ 1.58
CIRBP-220ENST00000588917 METTL22Q9BUU2 404 aaPredicted RBP24.9■■□□□ 1.58
CIRBP-220ENST00000588917 TRIM28Q13263 835 aaKnown RBP24.89■■□□□ 1.58
CIRBP-220ENST00000588917 DNAAF4Q8WXU2 420 aa24.89■■□□□ 1.58
CIRBP-220ENST00000588917 RCAN3Q9UKA8 241 aa24.89■■□□□ 1.58
CIRBP-220ENST00000588917 CARMIL3Q8ND23 1372 aa24.89■■□□□ 1.57
CIRBP-220ENST00000588917 ATP10DQ9P241 1426 aa24.88■■□□□ 1.57
CIRBP-220ENST00000588917 SERPINB2P05120 415 aa24.88■■□□□ 1.57
CIRBP-220ENST00000588917 TPTE2Q6XPS3 522 aa24.88■■□□□ 1.57
CIRBP-220ENST00000588917 PPP1R42Q7Z4L9 355 aa24.88■■□□□ 1.57
CIRBP-220ENST00000588917 NYXQ9GZU5 481 aa24.88■■□□□ 1.57
CIRBP-220ENST00000588917 NOB1Q9ULX3 412 aaKnown RBP24.88■■□□□ 1.57
CIRBP-220ENST00000588917 SCN7AQ01118 1682 aa24.88■■□□□ 1.57
CIRBP-220ENST00000588917 POLRMTO00411 1230 aaKnown RBP24.87■■□□□ 1.57
CIRBP-220ENST00000588917 BCAR3O75815 825 aa24.87■■□□□ 1.57
CIRBP-220ENST00000588917 API5Q9BZZ5 524 aaKnown RBP24.87■■□□□ 1.57
CIRBP-220ENST00000588917 BCORQ6W2J9 1755 aa24.86■■□□□ 1.57
CIRBP-220ENST00000588917 GPTP24298 496 aa24.86■■□□□ 1.57
CIRBP-220ENST00000588917 MYD88Q99836 296 aa24.86■■□□□ 1.57
CIRBP-220ENST00000588917 ISCA1Q9BUE6 129 aa24.86■■□□□ 1.57
CIRBP-220ENST00000588917 ADCY9O60503 1353 aa24.85■■□□□ 1.57
CIRBP-220ENST00000588917 NPHP1O15259 732 aa24.85■■□□□ 1.57
CIRBP-220ENST00000588917 DDR1Q08345 913 aa24.85■■□□□ 1.57
CIRBP-220ENST00000588917 NBPF5PQ86XG9 351 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-220ENST00000588917 CCDC191Q8NCU4 936 aa24.85■■□□□ 1.57
CIRBP-220ENST00000588917 GTF2E1P29083 439 aaPredicted RBP24.84■■□□□ 1.57
CIRBP-220ENST00000588917 LINS1Q8NG48 757 aa24.84■■□□□ 1.57
CIRBP-220ENST00000588917 NLRP10Q86W26 655 aa24.83■■□□□ 1.57
CIRBP-220ENST00000588917 FRAT1Q92837 279 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-220ENST00000588917 UTP14AQ9BVJ6 771 aaKnown RBP24.83■■□□□ 1.57
CIRBP-220ENST00000588917 RNF123Q5XPI4 1314 aa24.83■■□□□ 1.56
CIRBP-220ENST00000588917 ATP5J2-PTCD1G3V325 749 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms