RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
NEDD4L-218ENST00000587547 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
NEDD4L-218ENST00000587547 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.62
NEDD4L-218ENST00000587547 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
NEDD4L-218ENST00000587547 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
NEDD4L-218ENST00000587547 PRKAR2BP31323 418 aa11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 RASSF7Q02833 373 aa11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 DALRD3Q5D0E6 543 aaKnown RBP11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 NLGN1Q8N2Q7 840 aa11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 NCAPD2Q15021 1401 aa11.14□□□□□ -0.63
NEDD4L-218ENST00000587547 GYS1P13807 737 aa11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 VEGFAP15692 232 aaPredicted RBP11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 TIE1P35590 1138 aa11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 ATP6V1AP38606 617 aa11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 PRDM10Q9NQV6 1147 aa11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 KDRP35968 1356 aa11.13□□□□□ -0.63
NEDD4L-218ENST00000587547 SBF1O95248 1867 aa11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 KDM6AO15550 1401 aaPredicted RBP11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 GLTPD2A6NH11 291 aa11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 PDE4AP27815 886 aa11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 CHRNA5P30532 468 aa11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 TRAPPC3LQ5T215 181 aa11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
NEDD4L-218ENST00000587547 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 POTECB2RU33 542 aa11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 NEFMP07197 916 aa11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
NEDD4L-218ENST00000587547 ZC3H4Q9UPT8 1303 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-218ENST00000587547 ABHD8Q96I13 439 aa11.1□□□□□ -0.63
NEDD4L-218ENST00000587547 SLC4A9Q96Q91 983 aa11.1□□□□□ -0.63
NEDD4L-218ENST00000587547 CRISPLD2Q9H0B8 497 aa11.1□□□□□ -0.63
NEDD4L-218ENST00000587547 CNTNAP1P78357 1384 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 CTCFP49711 727 aaPredicted RBP11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 DDR1Q08345 913 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 MFSD10Q14728 455 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 POTEHQ6S545 545 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 RUNDC1Q96C34 613 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 ATG3Q9NT62 314 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 TMOD3Q9NYL9 352 aa11.09□□□□□ -0.63
NEDD4L-218ENST00000587547 LMNB1P20700 586 aa11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 LBX1P52954 281 aa11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
NEDD4L-218ENST00000587547 APAF1O14727 1248 aa11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 RFC4P35249 363 aa11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 YTHDC1Q96MU7 727 aaKnown RBP11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 SRP68Q9UHB9 627 aaKnown RBP11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
NEDD4L-218ENST00000587547 MLLT1Q03111 559 aaPredicted RBP11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 AIDAQ96BJ3 306 aa11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 CNTNAP4Q9C0A0 1308 aa11.06□□□□□ -0.64
NEDD4L-218ENST00000587547 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 RPS6KA4O75676 772 aa11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 VEGFBP49765 207 aa11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 RC3H1Q5TC82 1133 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
NEDD4L-218ENST00000587547 NFKBIEO00221 500 aa11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 SEMA3EO15041 775 aa11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 HSPA8P11142 646 aaKnown RBP11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 TMPOP42166 694 aaKnown RBP11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 RIPK4P57078 832 aa11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 HNRNPUQ00839 825 aaKnown RBP eCLIP11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 TRIM35Q9UPQ4 493 aa11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
NEDD4L-218ENST00000587547 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 CCDC85CA6NKD9 419 aa11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 POLRMTO00411 1230 aaKnown RBP11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 RGS19P49795 217 aa11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 IFNL2Q8IZJ0 200 aa11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 ADAMTS7Q9UKP4 1686 aa11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 USP42Q9H9J4 1324 aaKnown RBP11.03□□□□□ -0.64
NEDD4L-218ENST00000587547 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
NEDD4L-218ENST00000587547 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms