RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 NPHP1O15259 732 aa28.4■■■□□ 2.14
PKN1-210ENST00000587429 PDE6BP35913 854 aa28.4■■■□□ 2.14
PKN1-210ENST00000587429 LMOD3Q0VAK6 560 aa28.4■■■□□ 2.14
PKN1-210ENST00000587429 ZNF622Q969S3 477 aaKnown RBP eCLIP28.4■■■□□ 2.14
PKN1-210ENST00000587429 TRIM35Q9UPQ4 493 aa28.4■■■□□ 2.14
PKN1-210ENST00000587429 COL11A2P13942 1736 aaPredicted RBP28.39■■■□□ 2.14
PKN1-210ENST00000587429 MYL6BP14649 208 aa28.39■■■□□ 2.14
PKN1-210ENST00000587429 NIP7Q9Y221 180 aaKnown RBP eCLIP28.39■■■□□ 2.14
PKN1-210ENST00000587429 TTLL7Q6ZT98 887 aa28.38■■■□□ 2.13
PKN1-210ENST00000587429 NBPF5PQ86XG9 351 aaPredicted RBP28.38■■■□□ 2.13
PKN1-210ENST00000587429 FAM177BA6PVY3 158 aa28.37■■■□□ 2.13
PKN1-210ENST00000587429 ST5P78524 1137 aa28.37■■■□□ 2.13
PKN1-210ENST00000587429 RASSF7Q02833 373 aa28.37■■■□□ 2.13
PKN1-210ENST00000587429 NUP98P52948 1817 aa28.36■■■□□ 2.13
PKN1-210ENST00000587429 BABAM1Q9NWV8 329 aa28.36■■■□□ 2.13
PKN1-210ENST00000587429 RNF181Q9P0P0 153 aa28.36■■■□□ 2.13
PKN1-210ENST00000587429 RGL2O15211 777 aa28.35■■■□□ 2.13
PKN1-210ENST00000587429 EIF2S2P20042 333 aaKnown RBP28.35■■■□□ 2.13
PKN1-210ENST00000587429 ZNF219Q9P2Y4 722 aaPredicted RBP28.35■■■□□ 2.13
PKN1-210ENST00000587429 PDZRN3Q9UPQ7 1066 aa28.35■■■□□ 2.13
PKN1-210ENST00000587429 PRELPP51888 382 aa28.34■■■□□ 2.13
PKN1-210ENST00000587429 LAS1LQ9Y4W2 734 aaKnown RBP28.34■■■□□ 2.13
PKN1-210ENST00000587429 CCDC88AQ3V6T2 1871 aa28.34■■■□□ 2.13
PKN1-210ENST00000587429 SENP3-EIF4A1A0A087X0R7 540 aa28.33■■■□□ 2.13
PKN1-210ENST00000587429 KIF3CO14782 793 aa28.33■■■□□ 2.13
PKN1-210ENST00000587429 MAP3K15Q6ZN16 1313 aa28.33■■■□□ 2.13
PKN1-210ENST00000587429 CACNA1SQ13698 1873 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 ERVV-1B6SEH8 477 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 CHL1O00533 1208 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 SRGNP10124 158 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 PDIA6Q15084 440 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 KRT24Q2M2I5 525 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 SLX4Q8IY92 1834 aa28.32■■■□□ 2.12
PKN1-210ENST00000587429 ANXA1P04083 346 aa28.31■■■□□ 2.12
PKN1-210ENST00000587429 PROSER3Q2NL68 480 aa28.31■■■□□ 2.12
PKN1-210ENST00000587429 TPTE2Q6XPS3 522 aa28.31■■■□□ 2.12
PKN1-210ENST00000587429 NECTIN2Q92692 538 aa28.31■■■□□ 2.12
PKN1-210ENST00000587429 ZBTB3Q9H5J0 574 aa28.31■■■□□ 2.12
PKN1-210ENST00000587429 C21orf2O43822 256 aa28.3■■■□□ 2.12
PKN1-210ENST00000587429 CCDC184Q52MB2 194 aa28.3■■■□□ 2.12
PKN1-210ENST00000587429 KIF6Q6ZMV9 814 aa28.3■■■□□ 2.12
PKN1-210ENST00000587429 LRP10Q7Z4F1 713 aa28.3■■■□□ 2.12
PKN1-210ENST00000587429 ERBB4Q15303 1308 aa28.29■■■□□ 2.12
PKN1-210ENST00000587429 NFKBIEO00221 500 aa28.29■■■□□ 2.12
PKN1-210ENST00000587429 STYK1Q6J9G0 422 aa28.29■■■□□ 2.12
PKN1-210ENST00000587429 NMRK2Q9NPI5 230 aa28.29■■■□□ 2.12
PKN1-210ENST00000587429 APAF1O14727 1248 aa28.28■■■□□ 2.12
PKN1-210ENST00000587429 GPTP24298 496 aa28.28■■■□□ 2.12
PKN1-210ENST00000587429 MASTLQ96GX5 879 aa28.28■■■□□ 2.12
PKN1-210ENST00000587429 CNKSR1Q969H4 720 aa28.27■■■□□ 2.12
PKN1-210ENST00000587429 LMNB1P20700 586 aa28.26■■■□□ 2.11
PKN1-210ENST00000587429 PRPF40BQ6NWY9 871 aaKnown RBP28.26■■■□□ 2.11
PKN1-210ENST00000587429 KLRG2A4D1S0 409 aaPredicted RBP28.25■■■□□ 2.11
PKN1-210ENST00000587429 GTF2E1P29083 439 aaPredicted RBP28.25■■■□□ 2.11
PKN1-210ENST00000587429 NUTM1Q86Y26 1132 aa28.25■■■□□ 2.11
PKN1-210ENST00000587429 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
PKN1-210ENST00000587429 UBN2Q6ZU65 1347 aa28.24■■■□□ 2.11
PKN1-210ENST00000587429 ZNF316A6NFI3 1004 aaPredicted RBP28.24■■■□□ 2.11
PKN1-210ENST00000587429 NPR1P16066 1061 aa28.23■■■□□ 2.11
PKN1-210ENST00000587429 GIGYF2Q6Y7W6 1299 aaKnown RBP28.23■■■□□ 2.11
PKN1-210ENST00000587429 ZNF34Q8IZ26 560 aa28.23■■■□□ 2.11
PKN1-210ENST00000587429 ARFGEF2Q9Y6D5 1785 aa28.22■■■□□ 2.11
PKN1-210ENST00000587429 ERFEQ4G0M1 354 aa28.22■■■□□ 2.11
PKN1-210ENST00000587429 SUSD4Q5VX71 490 aa28.22■■■□□ 2.11
PKN1-210ENST00000587429 ABCC12Q96J65 1359 aa28.22■■■□□ 2.11
PKN1-210ENST00000587429 CFAP44Q96MT7 982 aa28.21■■■□□ 2.11
PKN1-210ENST00000587429 NYXQ9GZU5 481 aa28.21■■■□□ 2.11
PKN1-210ENST00000587429 TNRC6CQ9HCJ0 1690 aaKnown RBP28.2■■■□□ 2.11
PKN1-210ENST00000587429 AIMP1Q12904 312 aaKnown RBP28.2■■■□□ 2.1
PKN1-210ENST00000587429 COPS6Q7L5N1 327 aa28.2■■■□□ 2.1
PKN1-210ENST00000587429 XAGE3Q8WTP9 111 aa28.2■■■□□ 2.1
PKN1-210ENST00000587429 C7orf43Q8WVR3 580 aa28.2■■■□□ 2.1
PKN1-210ENST00000587429 MBIPQ9NS73 344 aa28.19■■■□□ 2.1
PKN1-210ENST00000587429 ZNF853P0CG23 659 aa28.18■■■□□ 2.1
PKN1-210ENST00000587429 RRAGCQ9HB90 399 aa28.18■■■□□ 2.1
PKN1-210ENST00000587429 DDX21Q9NR30 783 aaKnown RBP eCLIP28.18■■■□□ 2.1
PKN1-210ENST00000587429 CHPF2Q9P2E5 772 aa28.18■■■□□ 2.1
PKN1-210ENST00000587429 DICER1Q9UPY3 1922 aaKnown RBP28.18■■■□□ 2.1
PKN1-210ENST00000587429 KDM2BQ8NHM5 1336 aa28.18■■■□□ 2.1
PKN1-210ENST00000587429 CEP350Q5VT06 3117 aa28.17■■■□□ 2.1
PKN1-210ENST00000587429 OLFM4Q6UX06 510 aa28.17■■■□□ 2.1
PKN1-210ENST00000587429 TIAM2Q8IVF5 1701 aa28.16■■■□□ 2.1
PKN1-210ENST00000587429 NTSR2O95665 410 aa28.16■■■□□ 2.1
PKN1-210ENST00000587429 ZC3H4Q9UPT8 1303 aaKnown RBP28.16■■■□□ 2.1
PKN1-210ENST00000587429 TOMM70O94826 608 aa28.15■■■□□ 2.1
PKN1-210ENST00000587429 HDGFL1Q5TGJ6 251 aa28.15■■■□□ 2.1
PKN1-210ENST00000587429 DUSP27Q5VZP5 1158 aa28.15■■■□□ 2.1
PKN1-210ENST00000587429 TAOK3Q9H2K8 898 aa28.15■■■□□ 2.1
PKN1-210ENST00000587429 CRY2Q49AN0 593 aa28.14■■■□□ 2.1
PKN1-210ENST00000587429 LTBP3Q9NS15 1303 aa28.14■■■□□ 2.09
PKN1-210ENST00000587429 IBTKQ9P2D0 1353 aaPredicted RBP28.13■■■□□ 2.09
PKN1-210ENST00000587429 GLTPD2A6NH11 291 aa28.13■■■□□ 2.09
PKN1-210ENST00000587429 HSPA6P17066 643 aa28.13■■■□□ 2.09
PKN1-210ENST00000587429 SOGA3Q5TF21 947 aa28.13■■■□□ 2.09
PKN1-210ENST00000587429 IFT57Q9NWB7 429 aa28.13■■■□□ 2.09
PKN1-210ENST00000587429 HOXB7P09629 217 aa28.12■■■□□ 2.09
PKN1-210ENST00000587429 ALDH1B1P30837 517 aa28.12■■■□□ 2.09
PKN1-210ENST00000587429 PARP10Q53GL7 1025 aa28.12■■■□□ 2.09
PKN1-210ENST00000587429 C3orf67Q6ZVT6 689 aa28.12■■■□□ 2.09
PKN1-210ENST00000587429 PPP1R42Q7Z4L9 355 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms