RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
RETREG3-205ENST00000586870 ADRA2BP18089 450 aa23.29■■□□□ 1.32
RETREG3-205ENST00000586870 ANP32AP39687 249 aaKnown RBP23.29■■□□□ 1.32
RETREG3-205ENST00000586870 FAM161AQ3B820 660 aa23.29■■□□□ 1.32
RETREG3-205ENST00000586870 SOS1Q07889 1333 aaPredicted RBP23.28■■□□□ 1.32
RETREG3-205ENST00000586870 AMIGO3Q86WK7 504 aa23.28■■□□□ 1.32
RETREG3-205ENST00000586870 ZBTB1Q9Y2K1 713 aa23.28■■□□□ 1.32
RETREG3-205ENST00000586870 LRP5O75197 1615 aa23.28■■□□□ 1.32
RETREG3-205ENST00000586870 ZBTB7BO15156 539 aaPredicted RBP23.27■■□□□ 1.32
RETREG3-205ENST00000586870 A1BGP04217 495 aa23.27■■□□□ 1.32
RETREG3-205ENST00000586870 KRT24Q2M2I5 525 aa23.27■■□□□ 1.32
RETREG3-205ENST00000586870 ARHGEF1Q92888 912 aaKnown RBP23.27■■□□□ 1.32
RETREG3-205ENST00000586870 ARXQ96QS3 562 aa23.27■■□□□ 1.32
RETREG3-205ENST00000586870 ZNF831Q5JPB2 1677 aa23.27■■□□□ 1.32
RETREG3-205ENST00000586870 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
RETREG3-205ENST00000586870 PTPRCP08575 1304 aa23.25■■□□□ 1.31
RETREG3-205ENST00000586870 EIF2S2P20042 333 aaKnown RBP23.25■■□□□ 1.31
RETREG3-205ENST00000586870 PPP1R1BQ9UD71 204 aaPredicted RBP23.25■■□□□ 1.31
RETREG3-205ENST00000586870 TAF1LQ8IZX4 1826 aa23.24■■□□□ 1.31
RETREG3-205ENST00000586870 ZPR1O75312 459 aa23.24■■□□□ 1.31
RETREG3-205ENST00000586870 POLD1P28340 1107 aa23.24■■□□□ 1.31
RETREG3-205ENST00000586870 A0A087WZG4 1122 aa23.23■■□□□ 1.31
RETREG3-205ENST00000586870 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
RETREG3-205ENST00000586870 UBR2Q8IWV8 1755 aa23.23■■□□□ 1.31
RETREG3-205ENST00000586870 IL6STP40189 918 aaPredicted RBP23.22■■□□□ 1.31
RETREG3-205ENST00000586870 INTS3Q68E01 1043 aaKnown RBP23.22■■□□□ 1.31
RETREG3-205ENST00000586870 TJP1Q07157 1748 aa23.22■■□□□ 1.31
RETREG3-205ENST00000586870 PIP4K2AP48426 406 aaPredicted RBP23.22■■□□□ 1.31
RETREG3-205ENST00000586870 C8orf34Q49A92 452 aa23.22■■□□□ 1.31
RETREG3-205ENST00000586870 SMC5Q8IY18 1101 aa23.22■■□□□ 1.31
RETREG3-205ENST00000586870 EIF5P55010 431 aaKnown RBP23.2■■□□□ 1.3
RETREG3-205ENST00000586870 COL15A1P39059 1388 aa23.19■■□□□ 1.3
RETREG3-205ENST00000586870 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
RETREG3-205ENST00000586870 NLGN1Q8N2Q7 840 aa23.19■■□□□ 1.3
RETREG3-205ENST00000586870 NECTIN2Q92692 538 aa23.19■■□□□ 1.3
RETREG3-205ENST00000586870 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
RETREG3-205ENST00000586870 CICQ96RK0 1608 aaPredicted RBP23.18■■□□□ 1.3
RETREG3-205ENST00000586870 MYL6BP14649 208 aa23.18■■□□□ 1.3
RETREG3-205ENST00000586870 IPO9Q96P70 1041 aaKnown RBP23.18■■□□□ 1.3
RETREG3-205ENST00000586870 SRP68Q9UHB9 627 aaKnown RBP23.18■■□□□ 1.3
RETREG3-205ENST00000586870 KDM3BQ7LBC6 1761 aa23.18■■□□□ 1.3
RETREG3-205ENST00000586870 HOXB7P09629 217 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 USPL1Q5W0Q7 1092 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 STK31Q9BXU1 1019 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 NARFQ9UHQ1 456 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
RETREG3-205ENST00000586870 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
RETREG3-205ENST00000586870 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
RETREG3-205ENST00000586870 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
RETREG3-205ENST00000586870 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
RETREG3-205ENST00000586870 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
RETREG3-205ENST00000586870 GYS1P13807 737 aa23.15■■□□□ 1.3
RETREG3-205ENST00000586870 PTGER2P43116 358 aa23.15■■□□□ 1.3
RETREG3-205ENST00000586870 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
RETREG3-205ENST00000586870 CASZ1Q86V15 1759 aa23.15■■□□□ 1.3
RETREG3-205ENST00000586870 ERBB4Q15303 1308 aa23.15■■□□□ 1.3
RETREG3-205ENST00000586870 UBR3Q6ZT12 1888 aa23.14■■□□□ 1.29
RETREG3-205ENST00000586870 QSER1Q2KHR3 1735 aa23.14■■□□□ 1.29
RETREG3-205ENST00000586870 GCC1Q96CN9 775 aa23.14■■□□□ 1.29
RETREG3-205ENST00000586870 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
RETREG3-205ENST00000586870 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
RETREG3-205ENST00000586870 TUBGCP6Q96RT7 1819 aa23.12■■□□□ 1.29
RETREG3-205ENST00000586870 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
RETREG3-205ENST00000586870 MMP10P09238 476 aa23.11■■□□□ 1.29
RETREG3-205ENST00000586870 NUCB1Q02818 461 aa23.11■■□□□ 1.29
RETREG3-205ENST00000586870 KIF6Q6ZMV9 814 aa23.11■■□□□ 1.29
RETREG3-205ENST00000586870 SGIP1Q9BQI5 828 aa23.11■■□□□ 1.29
RETREG3-205ENST00000586870 PARP3Q9Y6F1 533 aa23.11■■□□□ 1.29
RETREG3-205ENST00000586870 CCT4P50991 539 aaKnown RBP23.1■■□□□ 1.29
RETREG3-205ENST00000586870 G2E3Q7L622 706 aa23.1■■□□□ 1.29
RETREG3-205ENST00000586870 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
RETREG3-205ENST00000586870 ANXA1P04083 346 aa23.09■■□□□ 1.29
RETREG3-205ENST00000586870 C1orf115Q9H7X2 142 aa23.09■■□□□ 1.29
RETREG3-205ENST00000586870 DDX21Q9NR30 783 aaKnown RBP eCLIP23.09■■□□□ 1.29
RETREG3-205ENST00000586870 CHPF2Q9P2E5 772 aa23.09■■□□□ 1.29
RETREG3-205ENST00000586870 ZNF652Q9Y2D9 606 aa23.09■■□□□ 1.29
RETREG3-205ENST00000586870 AIMP1Q12904 312 aaKnown RBP23.08■■□□□ 1.29
RETREG3-205ENST00000586870 BICDL1Q6ZP65 573 aa23.08■■□□□ 1.29
RETREG3-205ENST00000586870 ERICH6Q7L0X2 663 aa23.08■■□□□ 1.29
RETREG3-205ENST00000586870 PDIA6Q15084 440 aa23.08■■□□□ 1.28
RETREG3-205ENST00000586870 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
RETREG3-205ENST00000586870 FLIIQ13045 1269 aa23.07■■□□□ 1.28
RETREG3-205ENST00000586870 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
RETREG3-205ENST00000586870 SIRT2Q8IXJ6 389 aa23.07■■□□□ 1.28
RETREG3-205ENST00000586870 RPAP2Q8IXW5 612 aaPredicted RBP23.07■■□□□ 1.28
RETREG3-205ENST00000586870 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
RETREG3-205ENST00000586870 CHD1LQ86WJ1 897 aa23.06■■□□□ 1.28
RETREG3-205ENST00000586870 DDRGK1Q96HY6 314 aa23.06■■□□□ 1.28
RETREG3-205ENST00000586870 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
RETREG3-205ENST00000586870 ZBTB47Q9UFB7 747 aaPredicted RBP23.06■■□□□ 1.28
RETREG3-205ENST00000586870 COPS6Q7L5N1 327 aa23.05■■□□□ 1.28
RETREG3-205ENST00000586870 BCL2L12Q9HB09 334 aa23.05■■□□□ 1.28
RETREG3-205ENST00000586870 CLEC4GQ6UXB4 293 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 TTLL7Q6ZT98 887 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 ANKRD44Q8N8A2 993 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 XAGE3Q8WTP9 111 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 FHDC1Q9C0D6 1143 aaPredicted RBP23.04■■□□□ 1.28
RETREG3-205ENST00000586870 ZBTB3Q9H5J0 574 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms