RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 LAMB4A4D0S4 1761 aa17.7■□□□□ 0.42
PRKCSH-201ENST00000585325 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
PRKCSH-201ENST00000585325 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
PRKCSH-201ENST00000585325 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
PRKCSH-201ENST00000585325 PNISRQ8TF01 805 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-201ENST00000585325 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-201ENST00000585325 PDE6BP35913 854 aa17.68■□□□□ 0.42
PRKCSH-201ENST00000585325 RASSF7Q02833 373 aa17.68■□□□□ 0.42
PRKCSH-201ENST00000585325 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRKCSH-201ENST00000585325 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
PRKCSH-201ENST00000585325 ZNF652Q9Y2D9 606 aa17.68■□□□□ 0.42
PRKCSH-201ENST00000585325 SBF1O95248 1867 aa17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 NBPF26B4DH59 902 aa17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 ST5P78524 1137 aa17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 NBPF10Q6P3W6 841 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 NBPF15Q8N660 670 aa17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 PDZRN3Q9UPQ7 1066 aa17.67■□□□□ 0.42
PRKCSH-201ENST00000585325 CLEC4GQ6UXB4 293 aa17.65■□□□□ 0.42
PRKCSH-201ENST00000585325 MYBBP1AQ9BQG0 1328 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-201ENST00000585325 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-201ENST00000585325 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-201ENST00000585325 RIPK4P57078 832 aa17.63■□□□□ 0.41
PRKCSH-201ENST00000585325 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-201ENST00000585325 NGEFQ8N5V2 710 aa17.63■□□□□ 0.41
PRKCSH-201ENST00000585325 NIP7Q9Y221 180 aaKnown RBP eCLIP17.63■□□□□ 0.41
PRKCSH-201ENST00000585325 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-201ENST00000585325 CACNA1SQ13698 1873 aa17.63■□□□□ 0.41
PRKCSH-201ENST00000585325 VEGFAP15692 232 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-201ENST00000585325 LMNB1P20700 586 aa17.62■□□□□ 0.41
PRKCSH-201ENST00000585325 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
PRKCSH-201ENST00000585325 GLTPD2A6NH11 291 aa17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 C21orf2O43822 256 aa17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 PCNTO95613 3336 aa17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 CCDC88AQ3V6T2 1871 aa17.61■□□□□ 0.41
PRKCSH-201ENST00000585325 NFKBIEO00221 500 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 RGL2O15211 777 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 SRGNP10124 158 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 MYL6BP14649 208 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 HLFQ16534 295 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 STYK1Q6J9G0 422 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 TPTE2Q6XPS3 522 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 CNKSR1Q969H4 720 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
PRKCSH-201ENST00000585325 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-201ENST00000585325 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
PRKCSH-201ENST00000585325 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
PRKCSH-201ENST00000585325 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
PRKCSH-201ENST00000585325 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.41
PRKCSH-201ENST00000585325 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-201ENST00000585325 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.41e-7■■■□□ 17.1
PRKCSH-201ENST00000585325 PRPF40BQ6NWY9 871 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-201ENST00000585325 FER1L6Q2WGJ9 1857 aa17.58■□□□□ 0.4
PRKCSH-201ENST00000585325 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
PRKCSH-201ENST00000585325 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
PRKCSH-201ENST00000585325 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
PRKCSH-201ENST00000585325 NUP98P52948 1817 aa17.56■□□□□ 0.4
PRKCSH-201ENST00000585325 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
PRKCSH-201ENST00000585325 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
PRKCSH-201ENST00000585325 ZBTB3Q9H5J0 574 aa17.56■□□□□ 0.4
PRKCSH-201ENST00000585325 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
PRKCSH-201ENST00000585325 NPR1P16066 1061 aa17.55■□□□□ 0.4
PRKCSH-201ENST00000585325 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
PRKCSH-201ENST00000585325 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
PRKCSH-201ENST00000585325 TAOK3Q9H2K8 898 aa17.55■□□□□ 0.4
PRKCSH-201ENST00000585325 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
PRKCSH-201ENST00000585325 POTECB2RU33 542 aa17.54■□□□□ 0.4
PRKCSH-201ENST00000585325 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
PRKCSH-201ENST00000585325 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
PRKCSH-201ENST00000585325 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 GPTP24298 496 aa17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 ERFEQ4G0M1 354 aa17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-201ENST00000585325 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-201ENST00000585325 SLC34A2O95436 690 aa17.52■□□□□ 0.4
PRKCSH-201ENST00000585325 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
PRKCSH-201ENST00000585325 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
PRKCSH-201ENST00000585325 ADAMTS8Q9UP79 889 aa17.52■□□□□ 0.4
PRKCSH-201ENST00000585325 ABCC12Q96J65 1359 aa17.52■□□□□ 0.39
PRKCSH-201ENST00000585325 FOXN1O15353 648 aa17.51■□□□□ 0.39
PRKCSH-201ENST00000585325 CCDC93Q567U6 631 aa17.51■□□□□ 0.39
PRKCSH-201ENST00000585325 DPY19L2Q6NUT2 758 aa17.51■□□□□ 0.39
PRKCSH-201ENST00000585325 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
PRKCSH-201ENST00000585325 ANXA1P04083 346 aa17.5■□□□□ 0.39
PRKCSH-201ENST00000585325 GIGYF2Q6Y7W6 1299 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-201ENST00000585325 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
PRKCSH-201ENST00000585325 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
PRKCSH-201ENST00000585325 ALDH1B1P30837 517 aa17.49■□□□□ 0.39
PRKCSH-201ENST00000585325 PDIA6Q15084 440 aa17.49■□□□□ 0.39
PRKCSH-201ENST00000585325 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
PRKCSH-201ENST00000585325 SUSD4Q5VX71 490 aa17.49■□□□□ 0.39
PRKCSH-201ENST00000585325 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
PRKCSH-201ENST00000585325 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
PRKCSH-201ENST00000585325 CHL1O00533 1208 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms