RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 MYL6BP14649 208 aa23.39■■□□□ 1.33
SRSF1-209ENST00000585096 KIF6Q6ZMV9 814 aa23.39■■□□□ 1.33
SRSF1-209ENST00000585096 TRIM35Q9UPQ4 493 aa23.39■■□□□ 1.33
SRSF1-209ENST00000585096 ERVV-1B6SEH8 477 aa23.38■■□□□ 1.33
SRSF1-209ENST00000585096 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
SRSF1-209ENST00000585096 TPTE2Q6XPS3 522 aa23.38■■□□□ 1.33
SRSF1-209ENST00000585096 ZNF622Q969S3 477 aaKnown RBP eCLIP23.38■■□□□ 1.334e-15■■□□□ 12.1
SRSF1-209ENST00000585096 AFDNP55196 1824 aaKnown RBP23.38■■□□□ 1.33
SRSF1-209ENST00000585096 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
SRSF1-209ENST00000585096 HLFQ16534 295 aa23.37■■□□□ 1.33
SRSF1-209ENST00000585096 CHL1O00533 1208 aa23.36■■□□□ 1.33
SRSF1-209ENST00000585096 EIF2S2P20042 333 aaKnown RBP23.36■■□□□ 1.33
SRSF1-209ENST00000585096 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
SRSF1-209ENST00000585096 BRCA1P38398 1863 aaKnown RBP23.36■■□□□ 1.33
SRSF1-209ENST00000585096 MAP3K15Q6ZN16 1313 aa23.35■■□□□ 1.33
SRSF1-209ENST00000585096 STYK1Q6J9G0 422 aa23.34■■□□□ 1.33
SRSF1-209ENST00000585096 TTLL7Q6ZT98 887 aa23.34■■□□□ 1.33
SRSF1-209ENST00000585096 CNKSR1Q969H4 720 aa23.34■■□□□ 1.33
SRSF1-209ENST00000585096 RNF181Q9P0P0 153 aa23.34■■□□□ 1.33
SRSF1-209ENST00000585096 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
SRSF1-209ENST00000585096 BCORQ6W2J9 1755 aa23.34■■□□□ 1.33
SRSF1-209ENST00000585096 GTF2E1P29083 439 aaPredicted RBP23.33■■□□□ 1.33
SRSF1-209ENST00000585096 MASTLQ96GX5 879 aa23.33■■□□□ 1.33
SRSF1-209ENST00000585096 ARFGEF1Q9Y6D6 1849 aa23.32■■□□□ 1.32
SRSF1-209ENST00000585096 FAM177BA6PVY3 158 aa23.32■■□□□ 1.32
SRSF1-209ENST00000585096 APAF1O14727 1248 aa23.32■■□□□ 1.32
SRSF1-209ENST00000585096 SRGNP10124 158 aa23.32■■□□□ 1.32
SRSF1-209ENST00000585096 NYXQ9GZU5 481 aa23.32■■□□□ 1.32
SRSF1-209ENST00000585096 ZBTB3Q9H5J0 574 aa23.32■■□□□ 1.32
SRSF1-209ENST00000585096 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
SRSF1-209ENST00000585096 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
SRSF1-209ENST00000585096 PDIA6Q15084 440 aa23.3■■□□□ 1.32
SRSF1-209ENST00000585096 C21orf2O43822 256 aa23.29■■□□□ 1.32
SRSF1-209ENST00000585096 LMNB1P20700 586 aa23.29■■□□□ 1.32
SRSF1-209ENST00000585096 RASSF7Q02833 373 aa23.29■■□□□ 1.32
SRSF1-209ENST00000585096 KLRG2A4D1S0 409 aaPredicted RBP23.28■■□□□ 1.32
SRSF1-209ENST00000585096 ANP32CO43423 234 aa23.28■■□□□ 1.32
SRSF1-209ENST00000585096 NPR1P16066 1061 aa23.28■■□□□ 1.32
SRSF1-209ENST00000585096 GIGYF2Q6Y7W6 1299 aaKnown RBP23.28■■□□□ 1.32
SRSF1-209ENST00000585096 LRP10Q7Z4F1 713 aa23.28■■□□□ 1.32
SRSF1-209ENST00000585096 NECTIN2Q92692 538 aa23.28■■□□□ 1.32
SRSF1-209ENST00000585096 ZNF219Q9P2Y4 722 aaPredicted RBP23.28■■□□□ 1.32
SRSF1-209ENST00000585096 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
SRSF1-209ENST00000585096 HOXB7P09629 217 aa23.27■■□□□ 1.32
SRSF1-209ENST00000585096 GPTP24298 496 aa23.27■■□□□ 1.32
SRSF1-209ENST00000585096 SOGA3Q5TF21 947 aa23.27■■□□□ 1.32
SRSF1-209ENST00000585096 PRPF40BQ6NWY9 871 aaKnown RBP23.27■■□□□ 1.32
SRSF1-209ENST00000585096 ZC3H4Q9UPT8 1303 aaKnown RBP23.27■■□□□ 1.32
SRSF1-209ENST00000585096 KIF3CO14782 793 aa23.26■■□□□ 1.31
SRSF1-209ENST00000585096 KRT24Q2M2I5 525 aa23.26■■□□□ 1.31
SRSF1-209ENST00000585096 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
SRSF1-209ENST00000585096 ZNF34Q8IZ26 560 aa23.26■■□□□ 1.31
SRSF1-209ENST00000585096 DDX21Q9NR30 783 aaKnown RBP eCLIP23.26■■□□□ 1.31
SRSF1-209ENST00000585096 DLEC1Q9Y238 1755 aa23.26■■□□□ 1.31
SRSF1-209ENST00000585096 KDM2BQ8NHM5 1336 aa23.26■■□□□ 1.31
SRSF1-209ENST00000585096 NFKBIEO00221 500 aa23.25■■□□□ 1.31
SRSF1-209ENST00000585096 ANXA1P04083 346 aa23.25■■□□□ 1.31
SRSF1-209ENST00000585096 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
SRSF1-209ENST00000585096 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 GNAI1P63096 354 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 PARP10Q53GL7 1025 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 HDGFL1Q5TGJ6 251 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 COPS6Q7L5N1 327 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 NUTM1Q86Y26 1132 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
SRSF1-209ENST00000585096 IBTKQ9P2D0 1353 aaPredicted RBP23.24■■□□□ 1.31
SRSF1-209ENST00000585096 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 ALDH1B1P30837 517 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
SRSF1-209ENST00000585096 ERFEQ4G0M1 354 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 SUSD4Q5VX71 490 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 XAGE3Q8WTP9 111 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 UBN2Q6ZU65 1347 aa23.23■■□□□ 1.31
SRSF1-209ENST00000585096 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
SRSF1-209ENST00000585096 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
SRSF1-209ENST00000585096 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
SRSF1-209ENST00000585096 CHPF2Q9P2E5 772 aa23.22■■□□□ 1.31
SRSF1-209ENST00000585096 PRELPP51888 382 aa23.21■■□□□ 1.31
SRSF1-209ENST00000585096 DUSP27Q5VZP5 1158 aa23.21■■□□□ 1.31
SRSF1-209ENST00000585096 DBF4Q9UBU7 674 aaPredicted RBP23.21■■□□□ 1.31
SRSF1-209ENST00000585096 COL11A2P13942 1736 aaPredicted RBP23.2■■□□□ 1.3
SRSF1-209ENST00000585096 LTBP3Q9NS15 1303 aa23.2■■□□□ 1.3
SRSF1-209ENST00000585096 ABCC12Q96J65 1359 aa23.19■■□□□ 1.3
SRSF1-209ENST00000585096 TOMM70O94826 608 aa23.19■■□□□ 1.3
SRSF1-209ENST00000585096 NTSR2O95665 410 aa23.19■■□□□ 1.3
SRSF1-209ENST00000585096 CRY2Q49AN0 593 aa23.19■■□□□ 1.3
SRSF1-209ENST00000585096 CCDC93Q567U6 631 aa23.19■■□□□ 1.3
SRSF1-209ENST00000585096 C7orf43Q8WVR3 580 aa23.19■■□□□ 1.3
SRSF1-209ENST00000585096 UTP14AQ9BVJ6 771 aaKnown RBP23.19■■□□□ 1.3
SRSF1-209ENST00000585096 C16orf71Q8IYS4 520 aaPredicted RBP23.18■■□□□ 1.3
SRSF1-209ENST00000585096 RPGRQ92834 1020 aaKnown RBP23.18■■□□□ 1.3
SRSF1-209ENST00000585096 HYPKQ9NX55 129 aa23.18■■□□□ 1.3
SRSF1-209ENST00000585096 RIC1Q4ADV7 1423 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 TCIRG1Q13488 830 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 CCDC27Q2M243 656 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms