RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 NGEFQ8N5V2 710 aa26.99■■□□□ 1.91
TOP3A-219ENST00000584887 NFKBIEO00221 500 aa26.98■■□□□ 1.91
TOP3A-219ENST00000584887 PRELPP51888 382 aa26.98■■□□□ 1.91
TOP3A-219ENST00000584887 RALBP1Q15311 655 aa26.98■■□□□ 1.91
TOP3A-219ENST00000584887 RRAGCQ9HB90 399 aa26.98■■□□□ 1.91
TOP3A-219ENST00000584887 NIP7Q9Y221 180 aaKnown RBP eCLIP26.98■■□□□ 1.91
TOP3A-219ENST00000584887 FAM177BA6PVY3 158 aa26.97■■□□□ 1.91
TOP3A-219ENST00000584887 DDX10Q13206 875 aaKnown RBP26.97■■□□□ 1.91
TOP3A-219ENST00000584887 LAMB4A4D0S4 1761 aa26.97■■□□□ 1.91
TOP3A-219ENST00000584887 KDM3BQ7LBC6 1761 aa26.96■■□□□ 1.91
TOP3A-219ENST00000584887 CNKSR1Q969H4 720 aa26.95■■□□□ 1.9
TOP3A-219ENST00000584887 ZC3H4Q9UPT8 1303 aaKnown RBP26.94■■□□□ 1.9
TOP3A-219ENST00000584887 EIF4A1P60842 406 aaKnown RBP26.94■■□□□ 1.9
TOP3A-219ENST00000584887 STYK1Q6J9G0 422 aa26.94■■□□□ 1.9
TOP3A-219ENST00000584887 RBM46Q8TBY0 533 aaKnown RBP26.94■■□□□ 1.9
TOP3A-219ENST00000584887 RRP7AQ9Y3A4 280 aaKnown RBP26.94■■□□□ 1.9
TOP3A-219ENST00000584887 SRGNP10124 158 aa26.93■■□□□ 1.9
TOP3A-219ENST00000584887 APLP1P51693 650 aa26.93■■□□□ 1.9
TOP3A-219ENST00000584887 PRPF40BQ6NWY9 871 aaKnown RBP26.93■■□□□ 1.9
TOP3A-219ENST00000584887 MASTLQ96GX5 879 aa26.93■■□□□ 1.9
TOP3A-219ENST00000584887 CCDC88AQ3V6T2 1871 aa26.93■■□□□ 1.9
TOP3A-219ENST00000584887 CEP350Q5VT06 3117 aa26.93■■□□□ 1.9
TOP3A-219ENST00000584887 TNRC6CQ9HCJ0 1690 aaKnown RBP26.92■■□□□ 1.9
TOP3A-219ENST00000584887 CACNA1SQ13698 1873 aa26.92■■□□□ 1.9
TOP3A-219ENST00000584887 HLFQ16534 295 aa26.92■■□□□ 1.9
TOP3A-219ENST00000584887 TPTE2Q6XPS3 522 aa26.92■■□□□ 1.9
TOP3A-219ENST00000584887 TIAM2Q8IVF5 1701 aa26.92■■□□□ 1.9
TOP3A-219ENST00000584887 MYL6BP14649 208 aa26.91■■□□□ 1.9
TOP3A-219ENST00000584887 RIPK4P57078 832 aa26.91■■□□□ 1.9
TOP3A-219ENST00000584887 GTF2E1P29083 439 aaPredicted RBP26.9■■□□□ 1.9
TOP3A-219ENST00000584887 TAOK3Q9H2K8 898 aa26.9■■□□□ 1.9
TOP3A-219ENST00000584887 TSPYL4Q9UJ04 414 aa26.9■■□□□ 1.9
TOP3A-219ENST00000584887 SLX4Q8IY92 1834 aa26.9■■□□□ 1.9
TOP3A-219ENST00000584887 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
TOP3A-219ENST00000584887 RGL2O15211 777 aa26.89■■□□□ 1.9
TOP3A-219ENST00000584887 KIF6Q6ZMV9 814 aa26.89■■□□□ 1.9
TOP3A-219ENST00000584887 MYBBP1AQ9BQG0 1328 aaKnown RBP26.89■■□□□ 1.89
TOP3A-219ENST00000584887 ERFEQ4G0M1 354 aa26.88■■□□□ 1.89
TOP3A-219ENST00000584887 NPR1P16066 1061 aa26.87■■□□□ 1.89
TOP3A-219ENST00000584887 SOGA3Q5TF21 947 aa26.87■■□□□ 1.89
TOP3A-219ENST00000584887 TTLL7Q6ZT98 887 aa26.87■■□□□ 1.89
TOP3A-219ENST00000584887 MAP3K15Q6ZN16 1313 aa26.87■■□□□ 1.89
TOP3A-219ENST00000584887 FSTL1Q12841 308 aa26.86■■□□□ 1.89
TOP3A-219ENST00000584887 FER1L6Q2WGJ9 1857 aa26.86■■□□□ 1.89
TOP3A-219ENST00000584887 CCDC146Q8IYE0 955 aa26.86■■□□□ 1.89
TOP3A-219ENST00000584887 ZBTB3Q9H5J0 574 aa26.86■■□□□ 1.89
TOP3A-219ENST00000584887 TMPOP42166 694 aaKnown RBP26.85■■□□□ 1.89
TOP3A-219ENST00000584887 LMOD3Q0VAK6 560 aa26.85■■□□□ 1.89
TOP3A-219ENST00000584887 ERVV-1B6SEH8 477 aa26.84■■□□□ 1.89
TOP3A-219ENST00000584887 VEGFAP15692 232 aaPredicted RBP26.84■■□□□ 1.89
TOP3A-219ENST00000584887 GPTP24298 496 aa26.84■■□□□ 1.89
TOP3A-219ENST00000584887 NEUROD2Q15784 382 aa26.84■■□□□ 1.89
TOP3A-219ENST00000584887 DPY19L2Q6NUT2 758 aa26.84■■□□□ 1.89
TOP3A-219ENST00000584887 LTBP3Q9NS15 1303 aa26.84■■□□□ 1.89
TOP3A-219ENST00000584887 EIF2S2P20042 333 aaKnown RBP26.83■■□□□ 1.89
TOP3A-219ENST00000584887 WDR43Q15061 677 aaKnown RBP eCLIP26.83■■□□□ 1.89
TOP3A-219ENST00000584887 NUTM1Q86Y26 1132 aa26.83■■□□□ 1.89
TOP3A-219ENST00000584887 SMC1BQ8NDV3 1235 aa26.83■■□□□ 1.89
TOP3A-219ENST00000584887 ARFGEF2Q9Y6D5 1785 aa26.83■■□□□ 1.89
TOP3A-219ENST00000584887 CCDC93Q567U6 631 aa26.82■■□□□ 1.88
TOP3A-219ENST00000584887 NYXQ9GZU5 481 aa26.82■■□□□ 1.88
TOP3A-219ENST00000584887 HTRA3P83110 453 aa26.81■■□□□ 1.88
TOP3A-219ENST00000584887 ABCC12Q96J65 1359 aa26.81■■□□□ 1.88
TOP3A-219ENST00000584887 NUP98P52948 1817 aa26.81■■□□□ 1.88
TOP3A-219ENST00000584887 KLRG2A4D1S0 409 aaPredicted RBP26.8■■□□□ 1.88
TOP3A-219ENST00000584887 ERBB4Q15303 1308 aa26.8■■□□□ 1.88
TOP3A-219ENST00000584887 DICER1Q9UPY3 1922 aaKnown RBP26.8■■□□□ 1.88
TOP3A-219ENST00000584887 OLFM4Q6UX06 510 aa26.79■■□□□ 1.88
TOP3A-219ENST00000584887 WDR90Q96KV7 1748 aa26.79■■□□□ 1.88
TOP3A-219ENST00000584887 C7orf43Q8WVR3 580 aa26.78■■□□□ 1.88
TOP3A-219ENST00000584887 NECTIN2Q92692 538 aa26.78■■□□□ 1.88
TOP3A-219ENST00000584887 UBN2Q6ZU65 1347 aa26.77■■□□□ 1.88
TOP3A-219ENST00000584887 ANXA1P04083 346 aa26.77■■□□□ 1.88
TOP3A-219ENST00000584887 LAS1LQ9Y4W2 734 aaKnown RBP26.77■■□□□ 1.88
TOP3A-219ENST00000584887 ALDH1B1P30837 517 aa26.76■■□□□ 1.87
TOP3A-219ENST00000584887 RUNDC1Q96C34 613 aa26.76■■□□□ 1.87
TOP3A-219ENST00000584887 BABAM1Q9NWV8 329 aa26.76■■□□□ 1.87
TOP3A-219ENST00000584887 FKBP4Q02790 459 aaKnown RBP eCLIP26.75■■□□□ 1.87
TOP3A-219ENST00000584887 PROSER3Q2NL68 480 aa26.75■■□□□ 1.87
TOP3A-219ENST00000584887 SUSD4Q5VX71 490 aa26.75■■□□□ 1.87
TOP3A-219ENST00000584887 DNAJC5GQ8N7S2 189 aa26.75■■□□□ 1.87
TOP3A-219ENST00000584887 RPGRQ92834 1020 aaKnown RBP26.75■■□□□ 1.87
TOP3A-219ENST00000584887 ZNF277Q9NRM2 450 aaPredicted RBP26.75■■□□□ 1.87
TOP3A-219ENST00000584887 DDNO94850 711 aaPredicted RBP26.74■■□□□ 1.87
TOP3A-219ENST00000584887 GIGYF2Q6Y7W6 1299 aaKnown RBP26.74■■□□□ 1.87
TOP3A-219ENST00000584887 POTECB2RU33 542 aa26.73■■□□□ 1.87
TOP3A-219ENST00000584887 PDIA6Q15084 440 aa26.73■■□□□ 1.87
TOP3A-219ENST00000584887 ZNF34Q8IZ26 560 aa26.73■■□□□ 1.87
TOP3A-219ENST00000584887 RTKN2Q8IZC4 609 aa26.73■■□□□ 1.87
TOP3A-219ENST00000584887 IBTKQ9P2D0 1353 aaPredicted RBP26.72■■□□□ 1.87
TOP3A-219ENST00000584887 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
TOP3A-219ENST00000584887 AIMP1Q12904 312 aaKnown RBP26.71■■□□□ 1.87
TOP3A-219ENST00000584887 KRT24Q2M2I5 525 aa26.71■■□□□ 1.87
TOP3A-219ENST00000584887 CRY2Q49AN0 593 aa26.71■■□□□ 1.87
TOP3A-219ENST00000584887 NTSR2O95665 410 aa26.7■■□□□ 1.86
TOP3A-219ENST00000584887 LRP10Q7Z4F1 713 aa26.7■■□□□ 1.86
TOP3A-219ENST00000584887 PPP1R42Q7Z4L9 355 aa26.7■■□□□ 1.86
TOP3A-219ENST00000584887 PARP10Q53GL7 1025 aa26.69■■□□□ 1.86
TOP3A-219ENST00000584887 TRIM35Q9UPQ4 493 aa26.69■■□□□ 1.86
TOP3A-219ENST00000584887 CHL1O00533 1208 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms