RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 C1QTNF8P60827 252 aa23.65■■□□□ 1.38
SRSF1-208ENST00000584773 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
SRSF1-208ENST00000584773 GPBP1L1Q9HC44 474 aaPredicted RBP23.65■■□□□ 1.38
SRSF1-208ENST00000584773 CACNA1SQ13698 1873 aa23.65■■□□□ 1.38
SRSF1-208ENST00000584773 NUP98P52948 1817 aa23.64■■□□□ 1.38
SRSF1-208ENST00000584773 RASSF7Q02833 373 aa23.64■■□□□ 1.38
SRSF1-208ENST00000584773 CLEC4GQ6UXB4 293 aa23.64■■□□□ 1.38
SRSF1-208ENST00000584773 BRIP1Q9BX63 1249 aa23.64■■□□□ 1.38
SRSF1-208ENST00000584773 NIP7Q9Y221 180 aaKnown RBP eCLIP23.64■■□□□ 1.38
SRSF1-208ENST00000584773 ZNF652Q9Y2D9 606 aa23.64■■□□□ 1.38
SRSF1-208ENST00000584773 LAS1LQ9Y4W2 734 aaKnown RBP23.64■■□□□ 1.38
SRSF1-208ENST00000584773 SBF1O95248 1867 aa23.64■■□□□ 1.38
SRSF1-208ENST00000584773 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
SRSF1-208ENST00000584773 C9orf131Q5VYM1 1079 aa23.63■■□□□ 1.37
SRSF1-208ENST00000584773 NBPF5PQ86XG9 351 aaPredicted RBP23.63■■□□□ 1.37
SRSF1-208ENST00000584773 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
SRSF1-208ENST00000584773 ZNF622Q969S3 477 aaKnown RBP eCLIP23.63■■□□□ 1.374e-15■■□□□ 12.1
SRSF1-208ENST00000584773 ANXA1P04083 346 aa23.62■■□□□ 1.37
SRSF1-208ENST00000584773 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
SRSF1-208ENST00000584773 ZNF219Q9P2Y4 722 aaPredicted RBP23.62■■□□□ 1.37
SRSF1-208ENST00000584773 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
SRSF1-208ENST00000584773 PDE6BP35913 854 aa23.61■■□□□ 1.37
SRSF1-208ENST00000584773 ST5P78524 1137 aa23.61■■□□□ 1.37
SRSF1-208ENST00000584773 PROSER3Q2NL68 480 aa23.61■■□□□ 1.37
SRSF1-208ENST00000584773 ZBTB3Q9H5J0 574 aa23.61■■□□□ 1.37
SRSF1-208ENST00000584773 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
SRSF1-208ENST00000584773 PRELPP51888 382 aa23.6■■□□□ 1.37
SRSF1-208ENST00000584773 PDIA6Q15084 440 aa23.6■■□□□ 1.37
SRSF1-208ENST00000584773 MAP3K15Q6ZN16 1313 aa23.6■■□□□ 1.37
SRSF1-208ENST00000584773 CHL1O00533 1208 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 APAF1O14727 1248 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 LRP10Q7Z4F1 713 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 RNF181Q9P0P0 153 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 SLX4Q8IY92 1834 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 TNRC6CQ9HCJ0 1690 aaKnown RBP23.59■■□□□ 1.37
SRSF1-208ENST00000584773 KIF6Q6ZMV9 814 aa23.59■■□□□ 1.37
SRSF1-208ENST00000584773 CCDC88AQ3V6T2 1871 aa23.58■■□□□ 1.36
SRSF1-208ENST00000584773 C21orf2O43822 256 aa23.57■■□□□ 1.36
SRSF1-208ENST00000584773 SRGNP10124 158 aa23.57■■□□□ 1.36
SRSF1-208ENST00000584773 GPTP24298 496 aa23.57■■□□□ 1.36
SRSF1-208ENST00000584773 ERBB4Q15303 1308 aa23.57■■□□□ 1.36
SRSF1-208ENST00000584773 ERVV-1B6SEH8 477 aa23.56■■□□□ 1.36
SRSF1-208ENST00000584773 NFKBIEO00221 500 aa23.56■■□□□ 1.36
SRSF1-208ENST00000584773 RGL2O15211 777 aa23.56■■□□□ 1.36
SRSF1-208ENST00000584773 UBN2Q6ZU65 1347 aa23.56■■□□□ 1.36
SRSF1-208ENST00000584773 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
SRSF1-208ENST00000584773 ABCC12Q96J65 1359 aa23.56■■□□□ 1.36
SRSF1-208ENST00000584773 ARFGEF2Q9Y6D5 1785 aa23.55■■□□□ 1.36
SRSF1-208ENST00000584773 KIF3CO14782 793 aa23.55■■□□□ 1.36
SRSF1-208ENST00000584773 TPTE2Q6XPS3 522 aa23.55■■□□□ 1.36
SRSF1-208ENST00000584773 NMRK2Q9NPI5 230 aa23.54■■□□□ 1.36
SRSF1-208ENST00000584773 PDZRN3Q9UPQ7 1066 aa23.54■■□□□ 1.36
SRSF1-208ENST00000584773 FER1L6Q2WGJ9 1857 aa23.53■■□□□ 1.36
SRSF1-208ENST00000584773 STYK1Q6J9G0 422 aa23.53■■□□□ 1.36
SRSF1-208ENST00000584773 PRPF40BQ6NWY9 871 aaKnown RBP23.53■■□□□ 1.36
SRSF1-208ENST00000584773 MASTLQ96GX5 879 aa23.53■■□□□ 1.36
SRSF1-208ENST00000584773 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
SRSF1-208ENST00000584773 AIMP1Q12904 312 aaKnown RBP23.52■■□□□ 1.36
SRSF1-208ENST00000584773 ERFEQ4G0M1 354 aa23.52■■□□□ 1.36
SRSF1-208ENST00000584773 SUSD4Q5VX71 490 aa23.52■■□□□ 1.36
SRSF1-208ENST00000584773 TIAM2Q8IVF5 1701 aa23.51■■□□□ 1.35
SRSF1-208ENST00000584773 GTF2E1P29083 439 aaPredicted RBP23.51■■□□□ 1.35
SRSF1-208ENST00000584773 GIGYF2Q6Y7W6 1299 aaKnown RBP23.51■■□□□ 1.35
SRSF1-208ENST00000584773 XAGE3Q8WTP9 111 aa23.51■■□□□ 1.35
SRSF1-208ENST00000584773 CNKSR1Q969H4 720 aa23.51■■□□□ 1.35
SRSF1-208ENST00000584773 CFAP44Q96MT7 982 aa23.51■■□□□ 1.35
SRSF1-208ENST00000584773 COPS6Q7L5N1 327 aa23.5■■□□□ 1.35
SRSF1-208ENST00000584773 ZNF34Q8IZ26 560 aa23.5■■□□□ 1.35
SRSF1-208ENST00000584773 CHPF2Q9P2E5 772 aa23.5■■□□□ 1.35
SRSF1-208ENST00000584773 KLRG2A4D1S0 409 aaPredicted RBP23.49■■□□□ 1.35
SRSF1-208ENST00000584773 ZNF853P0CG23 659 aa23.49■■□□□ 1.35
SRSF1-208ENST00000584773 LMNB1P20700 586 aa23.49■■□□□ 1.35
SRSF1-208ENST00000584773 OLFM4Q6UX06 510 aa23.49■■□□□ 1.35
SRSF1-208ENST00000584773 ANKRD36CQ5JPF3 1778 aa23.48■■□□□ 1.35
SRSF1-208ENST00000584773 NPR1P16066 1061 aa23.48■■□□□ 1.35
SRSF1-208ENST00000584773 HDGFL1Q5TGJ6 251 aa23.48■■□□□ 1.35
SRSF1-208ENST00000584773 DDX21Q9NR30 783 aaKnown RBP eCLIP23.48■■□□□ 1.35
SRSF1-208ENST00000584773 ANP32CO43423 234 aa23.47■■□□□ 1.35
SRSF1-208ENST00000584773 NTSR2O95665 410 aa23.47■■□□□ 1.35
SRSF1-208ENST00000584773 DUSP27Q5VZP5 1158 aa23.47■■□□□ 1.35
SRSF1-208ENST00000584773 ZNF428Q96B54 188 aa23.47■■□□□ 1.35
SRSF1-208ENST00000584773 NYXQ9GZU5 481 aa23.47■■□□□ 1.35
SRSF1-208ENST00000584773 MRS2Q9HD23 443 aa23.47■■□□□ 1.35
SRSF1-208ENST00000584773 C3orf67Q6ZVT6 689 aa23.46■■□□□ 1.35
SRSF1-208ENST00000584773 SLC51AQ86UW1 340 aa23.45■■□□□ 1.34
SRSF1-208ENST00000584773 C7orf43Q8WVR3 580 aa23.45■■□□□ 1.34
SRSF1-208ENST00000584773 IFT57Q9NWB7 429 aa23.45■■□□□ 1.34
SRSF1-208ENST00000584773 IBTKQ9P2D0 1353 aaPredicted RBP23.45■■□□□ 1.34
SRSF1-208ENST00000584773 DICER1Q9UPY3 1922 aaKnown RBP23.44■■□□□ 1.34
SRSF1-208ENST00000584773 ELL2O00472 640 aaPredicted RBP23.44■■□□□ 1.34
SRSF1-208ENST00000584773 TAOK3Q9H2K8 898 aa23.43■■□□□ 1.34
SRSF1-208ENST00000584773 HOXB7P09629 217 aa23.42■■□□□ 1.34
SRSF1-208ENST00000584773 GNAI1P63096 354 aa23.42■■□□□ 1.34
SRSF1-208ENST00000584773 CRY2Q49AN0 593 aa23.42■■□□□ 1.34
SRSF1-208ENST00000584773 RRAGCQ9HB90 399 aa23.42■■□□□ 1.34
SRSF1-208ENST00000584773 PARP10Q53GL7 1025 aa23.41■■□□□ 1.34
SRSF1-208ENST00000584773 PPP1R42Q7Z4L9 355 aa23.41■■□□□ 1.34
SRSF1-208ENST00000584773 SYNE4Q8N205 404 aa23.41■■□□□ 1.34
SRSF1-208ENST00000584773 KDM2BQ8NHM5 1336 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms