RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 CCDC24Q8N4L8 307 aa27.13■■□□□ 1.93
TOP3A-218ENST00000584669 NUP98P52948 1817 aa27.12■■□□□ 1.93
TOP3A-218ENST00000584669 CAMTA2O94983 1202 aa27.12■■□□□ 1.93
TOP3A-218ENST00000584669 TTLL6Q8N841 843 aa27.12■■□□□ 1.93
TOP3A-218ENST00000584669 NMRK2Q9NPI5 230 aa27.12■■□□□ 1.93
TOP3A-218ENST00000584669 RASSF7Q02833 373 aa27.11■■□□□ 1.93
TOP3A-218ENST00000584669 SETDB2Q96T68 719 aa27.1■■□□□ 1.93
TOP3A-218ENST00000584669 HSPA6P17066 643 aa27.09■■□□□ 1.93
TOP3A-218ENST00000584669 KRT24Q2M2I5 525 aa27.09■■□□□ 1.93
TOP3A-218ENST00000584669 PRR5LQ6MZQ0 368 aa27.09■■□□□ 1.93
TOP3A-218ENST00000584669 ZNF622Q969S3 477 aaKnown RBP eCLIP27.09■■□□□ 1.93
TOP3A-218ENST00000584669 DLEC1Q9Y238 1755 aa27.09■■□□□ 1.93
TOP3A-218ENST00000584669 ANKRD31Q8N7Z5 1873 aa27.08■■□□□ 1.93
TOP3A-218ENST00000584669 CNBD1Q8NA66 436 aa27.08■■□□□ 1.93
TOP3A-218ENST00000584669 NGEFQ8N5V2 710 aa27.07■■□□□ 1.92
TOP3A-218ENST00000584669 CFAP44Q96MT7 982 aa27.07■■□□□ 1.92
TOP3A-218ENST00000584669 EIF2S2P20042 333 aaKnown RBP27.06■■□□□ 1.92
TOP3A-218ENST00000584669 PDE6BP35913 854 aa27.06■■□□□ 1.92
TOP3A-218ENST00000584669 BRIP1Q9BX63 1249 aa27.06■■□□□ 1.92
TOP3A-218ENST00000584669 MYL6BP14649 208 aa27.05■■□□□ 1.92
TOP3A-218ENST00000584669 MBIPQ9NS73 344 aa27.05■■□□□ 1.92
TOP3A-218ENST00000584669 ZNF219Q9P2Y4 722 aaPredicted RBP27.05■■□□□ 1.92
TOP3A-218ENST00000584669 ZNF853P0CG23 659 aa27.04■■□□□ 1.92
TOP3A-218ENST00000584669 ST5P78524 1137 aa27.04■■□□□ 1.92
TOP3A-218ENST00000584669 ZNF652Q9Y2D9 606 aa27.04■■□□□ 1.92
TOP3A-218ENST00000584669 KDM2BQ8NHM5 1336 aa27.04■■□□□ 1.92
TOP3A-218ENST00000584669 SBF1O95248 1867 aa27.04■■□□□ 1.92
TOP3A-218ENST00000584669 TOMM70O94826 608 aa27.03■■□□□ 1.92
TOP3A-218ENST00000584669 C16orf71Q8IYS4 520 aaPredicted RBP27.03■■□□□ 1.92
TOP3A-218ENST00000584669 FAM9BQ8IZU0 186 aa27.03■■□□□ 1.92
TOP3A-218ENST00000584669 LMNB1P20700 586 aa27.02■■□□□ 1.92
TOP3A-218ENST00000584669 NBPF5PQ86XG9 351 aaPredicted RBP27.02■■□□□ 1.92
TOP3A-218ENST00000584669 NECTIN2Q92692 538 aa27.02■■□□□ 1.92
TOP3A-218ENST00000584669 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
TOP3A-218ENST00000584669 ERBB4Q15303 1308 aa27.01■■□□□ 1.91
TOP3A-218ENST00000584669 CALD1Q05682 793 aaKnown RBP27.01■■□□□ 1.91
TOP3A-218ENST00000584669 PDIA6Q15084 440 aa27.01■■□□□ 1.91
TOP3A-218ENST00000584669 IFT57Q9NWB7 429 aa27.01■■□□□ 1.91
TOP3A-218ENST00000584669 COL11A2P13942 1736 aaPredicted RBP27.01■■□□□ 1.91
TOP3A-218ENST00000584669 ANXA1P04083 346 aa27■■□□□ 1.91
TOP3A-218ENST00000584669 HLFQ16534 295 aa27■■□□□ 1.91
TOP3A-218ENST00000584669 TTLL7Q6ZT98 887 aa27■■□□□ 1.91
TOP3A-218ENST00000584669 C21orf2O43822 256 aa26.99■■□□□ 1.91
TOP3A-218ENST00000584669 GNAI1P63096 354 aa26.99■■□□□ 1.91
TOP3A-218ENST00000584669 PROSER3Q2NL68 480 aa26.99■■□□□ 1.91
TOP3A-218ENST00000584669 CLEC4GQ6UXB4 293 aa26.99■■□□□ 1.91
TOP3A-218ENST00000584669 NFKBIEO00221 500 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 PRELPP51888 382 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 CCDC27Q2M243 656 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 LRP10Q7Z4F1 713 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 WWC1Q8IX03 1113 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 RRAGCQ9HB90 399 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 NIP7Q9Y221 180 aaKnown RBP eCLIP26.98■■□□□ 1.91
TOP3A-218ENST00000584669 CACNA1SQ13698 1873 aa26.98■■□□□ 1.91
TOP3A-218ENST00000584669 FAM177BA6PVY3 158 aa26.97■■□□□ 1.91
TOP3A-218ENST00000584669 ANKRD36CQ5JPF3 1778 aa26.97■■□□□ 1.91
TOP3A-218ENST00000584669 MAP3K15Q6ZN16 1313 aa26.96■■□□□ 1.91
TOP3A-218ENST00000584669 DUSP27Q5VZP5 1158 aa26.96■■□□□ 1.91
TOP3A-218ENST00000584669 SALL2Q9Y467 1007 aaPredicted RBP26.96■■□□□ 1.91
TOP3A-218ENST00000584669 KIF6Q6ZMV9 814 aa26.95■■□□□ 1.9
TOP3A-218ENST00000584669 CNKSR1Q969H4 720 aa26.95■■□□□ 1.9
TOP3A-218ENST00000584669 ZBTB3Q9H5J0 574 aa26.95■■□□□ 1.9
TOP3A-218ENST00000584669 ZC3H4Q9UPT8 1303 aaKnown RBP26.94■■□□□ 1.9
TOP3A-218ENST00000584669 RGL2O15211 777 aa26.94■■□□□ 1.9
TOP3A-218ENST00000584669 STYK1Q6J9G0 422 aa26.94■■□□□ 1.9
TOP3A-218ENST00000584669 RBM46Q8TBY0 533 aaKnown RBP26.94■■□□□ 1.9
TOP3A-218ENST00000584669 ERVV-1B6SEH8 477 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 HOXB7P09629 217 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 SRGNP10124 158 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 APLP1P51693 650 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 HDGFL1Q5TGJ6 251 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 PRPF40BQ6NWY9 871 aaKnown RBP26.93■■□□□ 1.9
TOP3A-218ENST00000584669 MASTLQ96GX5 879 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 CCDC88AQ3V6T2 1871 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 CEP350Q5VT06 3117 aa26.93■■□□□ 1.9
TOP3A-218ENST00000584669 TNRC6CQ9HCJ0 1690 aaKnown RBP26.92■■□□□ 1.9
TOP3A-218ENST00000584669 TPTE2Q6XPS3 522 aa26.92■■□□□ 1.9
TOP3A-218ENST00000584669 CHPF2Q9P2E5 772 aa26.92■■□□□ 1.9
TOP3A-218ENST00000584669 TIAM2Q8IVF5 1701 aa26.92■■□□□ 1.9
TOP3A-218ENST00000584669 ELL2O00472 640 aaPredicted RBP26.91■■□□□ 1.9
TOP3A-218ENST00000584669 NCBP3Q53F19 620 aaKnown RBP26.91■■□□□ 1.9
TOP3A-218ENST00000584669 C8orf58Q8NAV2 365 aa26.91■■□□□ 1.9
TOP3A-218ENST00000584669 TSR2Q969E8 191 aaKnown RBP26.91■■□□□ 1.9
TOP3A-218ENST00000584669 DDX21Q9NR30 783 aaKnown RBP eCLIP26.91■■□□□ 1.9
TOP3A-218ENST00000584669 GTF2E1P29083 439 aaPredicted RBP26.9■■□□□ 1.9
TOP3A-218ENST00000584669 TAOK3Q9H2K8 898 aa26.9■■□□□ 1.9
TOP3A-218ENST00000584669 SLX4Q8IY92 1834 aa26.9■■□□□ 1.9
TOP3A-218ENST00000584669 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
TOP3A-218ENST00000584669 AIMP1Q12904 312 aaKnown RBP26.89■■□□□ 1.9
TOP3A-218ENST00000584669 COPS6Q7L5N1 327 aa26.89■■□□□ 1.9
TOP3A-218ENST00000584669 XAGE3Q8WTP9 111 aa26.89■■□□□ 1.9
TOP3A-218ENST00000584669 ERFEQ4G0M1 354 aa26.88■■□□□ 1.89
TOP3A-218ENST00000584669 ARFGEF2Q9Y6D5 1785 aa26.88■■□□□ 1.89
TOP3A-218ENST00000584669 NPR1P16066 1061 aa26.87■■□□□ 1.89
TOP3A-218ENST00000584669 GPTP24298 496 aa26.87■■□□□ 1.89
TOP3A-218ENST00000584669 SOGA3Q5TF21 947 aa26.87■■□□□ 1.89
TOP3A-218ENST00000584669 GIGYF2Q6Y7W6 1299 aaKnown RBP26.87■■□□□ 1.89
TOP3A-218ENST00000584669 IL16Q14005 1332 aa26.87■■□□□ 1.89
TOP3A-218ENST00000584669 FSTL1Q12841 308 aa26.86■■□□□ 1.89
TOP3A-218ENST00000584669 FER1L6Q2WGJ9 1857 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms